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v1.0: Inaugural release for the mono repository
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@tskir tskir released this 22 Jul 10:50
· 714 commits to master since this release
v1.0
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Learn about vigilant mode.

After about 5 years of development of this pipeline, it's probably about time to start doing the formal versioning and releases. Recently I merged everything into one mono repository (this one) and renamed it to eva-opentargets. It contains:

  • The core pipeline used to process ClinVar data and generate Open Targets submission → eva_cttv_pipeline;
  • Batch submission and manual curation documentation → docs;
  • Helper pipelines for querying VEP and for processing repeat expansion variants → vep-mapping-pipeline;
  • Scripts for analysing the ClinVar data model → clinvar-variant-types;
  • Helper scripts for comparing sets of Open Targets evidence strings → compare-evidence-strings.

The versioning scheme used will more or less comply to the semantic versioning approach.

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