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Add transcripts to consequences #405

Merged
merged 9 commits into from
Dec 19, 2023
Merged

Add transcripts to consequences #405

merged 9 commits into from
Dec 19, 2023

Commits on Dec 7, 2023

  1. add transcript flag for VEP

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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  2. WIP on getting transcripts from biomart

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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  3. add transcript flag in repeat expansion pipeline

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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  4. refactor uniqueness checks and add tests

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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  5. add flags to scripts

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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  6. WIP for transcripts in annotation

    @apriltuesday
    apriltuesday committed Dec 7, 2023
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Commits on Dec 11, 2023

  1. add transcript id to annotated xml output

    @apriltuesday
    apriltuesday committed Dec 11, 2023
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  2. update documentation

    @apriltuesday
    apriltuesday committed Dec 11, 2023
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Commits on Dec 19, 2023

  1. update log statement

    @apriltuesday
    apriltuesday committed Dec 19, 2023
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