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merge paru_dev2 into dev2, with major updates to ParU, GraphBLAS, and minor changes to CHOLMOD, SPQR, SPEX, and Example. #816

Merged
merged 88 commits into from
May 29, 2024
Merged

merge paru_dev2 into dev2, with major updates to ParU, GraphBLAS, and minor changes to CHOLMOD, SPQR, SPEX, and Example. #816

merged 88 commits into from
May 29, 2024

Commits on Apr 1, 2024

  1. merge include files into ParU.h

    @DrTimothyAldenDavis
    DrTimothyAldenDavis committed Apr 1, 2024
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  2. typecast to avoid compiler warning

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  3. comments and user guide

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    DrTimothyAldenDavis committed Apr 1, 2024
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  4. remove "m" parameter from ParU_Resid methods

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Commits on Apr 2, 2024

  1. make ParU_Perm and InvPerm user-callable (still need C variants)

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  2. cleanup and error handling

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  3. copyright and license

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Commits on Apr 3, 2024

  1. working on test coverage

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  2. comments about untested code

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Commits on Apr 4, 2024

  1. LSolve, USolve, Perm, and InvPerm for C interface

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Commits on Apr 9, 2024

  1. progress on user guide

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Commits on Apr 11, 2024

  1. user guide and minor code updates

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Commits on Apr 15, 2024

  1. docs and coverage

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Commits on Apr 17, 2024

  1. adding CHOLMOD query methods

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  2. CHOLMOD test coverage: rely on CHOLMOD_HAS_CUDA from cholmod.h

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  3. revert to UMFPACK 6.3.3

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  4. revert to KLU 2.3.3

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  5. version updates

    @DrTimothyAldenDavis
    DrTimothyAldenDavis committed Apr 17, 2024
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  6. ParU test coverage: find cublas_v2.h for CHOLMOD

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  7. convert UMFPACK info into ParU_Info

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Commits on Apr 18, 2024

  1. cleanup code; first draft of user guide

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  2. remove old tcov output

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Commits on Apr 19, 2024

  1. add FIXME about user guide re: PARU_1TASK

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Commits on Apr 23, 2024

  1. ParU MATLAB interface is working

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Commits on Apr 24, 2024

  1. const Sym object; MATLAB options

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Commits on Apr 25, 2024

  1. MATLAB testing

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  2. meeting with Mohsen

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Commits on Apr 26, 2024

  1. SuiteSparse_config: split BLAS defn into macros and functions

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  2. malloc/free wrappers simplified

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Commits on Apr 29, 2024

  1. testing ParU matlab interface

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Commits on Apr 30, 2024

  1. ParU: full test coverage, remove Work->Sym, other cleanup

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Commits on May 1, 2024

  1. add ParU_Get

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  2. user guide, control settings

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  3. demos

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Commits on May 2, 2024

  1. full test coverage, with ParU_Get added

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  2. Tcov makefile: remove target no longer needed

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  3. demos and docs

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  4. MATLAB interface: cleanup and Contents.m

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  5. testing

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  6. Revert "testing" 

    This reverts commit e026900.
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  7. testing

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  8. testing

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  9. testing

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  10. rename MATLAB folder to ParU

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  11. more testing

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  12. rename back to MATLAB

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  13. rename back to MATLAB

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  14. testing

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  15. make Symbolic and Numeric opaque

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  16. symbolic and numeric objects now opaque

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Commits on May 5, 2024

  1. ParU Control: now an opaque object, all tests pass, 100% coverage

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  2. cleanup

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  3. Docs fixme

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  4. MATLAB interface and tests

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Commits on May 7, 2024

  1. rename UMFPACK_ORDERING_* to PARU_ORDERING_*; add Get/Set to user gui… 

    …de; other cleanup
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  2. ParU MATLAB interface: fix undefined macros

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  3. resolved TODO for user guide, re: PARU_1TASK setting

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Commits on May 8, 2024

  1. ParU: row scaling

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  2. MATLAB testing

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Commits on May 14, 2024

  1. MATLAB paru interface

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  2. OpenMP, testing

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  3. matlab

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  4. trying to compile SPEX mexFunction in MATLAB 2024a on Mac M1

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  5. gcc 7.5.0 fails; mention this in the user guide

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  6. ParU mexFunction does not work on the M1 Mac in MATLAB 2024a...

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Commits on May 15, 2024

  1. GraphBLAS: matlab interface for Apple Silicon

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  2. Merge branch 'paru_dev2' of https://github.com/DrTimothyAldenDavis/Su… 

    …iteSparse into paru_dev2
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  3. ParU user guide, re: MATLAB

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Commits on May 16, 2024

  1. ParU: fix mexFunction on Mac (undefined "_main")

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  2. SPEX: fix MATLAB mexFunction on Mac (undefined "_main")

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  3. installing SPEX and ParU MATLAB functions

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  4. Merge branch 'paru_dev2' of https://github.com/DrTimothyAldenDavis/Su… 

    …iteSparse into paru_dev2
    @DrTimothyAldenDavis
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  5. ParU: add PARU_CONTROL_OPENMP, and ParU_C_Get_Control_*

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  6. Merge branch 'paru_dev2' of https://github.com/DrTimothyAldenDavis/Su… 

    …iteSparse into paru_dev2
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Commits on May 17, 2024

  1. GraphBLAS: on the Mac

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Commits on May 20, 2024

  1. Merge pull request #804 from DrTimothyAldenDavis/dev2 

    updates from dev2
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  2. SPEX 3.1.1

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Commits on May 23, 2024

  1. GraphBLAS 9.2.0.beta1

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  2. Merge pull request #811 from DrTimothyAldenDavis/dev2 

    macos updates from dev2
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  3. Merge pull request #812 from DrTimothyAldenDavis/dev2 

    Python configuration
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  4. attempt to fix TestConfig/GraphBLAS/demo.cc for mingw+clang64

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  5. GraphBLAS: Limit scope of extern "C" block to function definitions. 

    Headers shouldn't be included in extern "C" blocks. These blocks are only
really needed for function definitions.

Limit the scope of the extern "C" block in GraphBLAS.h to where is really
needed.
    @mmuetzel
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  6. revert TestConfig/GraphBLAS/demo.cc

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  7. Merge pull request #813 from mmuetzel/graphblas 

    GraphBLAS: Limit scope of extern "C" block to function declarations.
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  8. Merge pull request #814 from DrTimothyAldenDavis/dev2 

    update paru_dev2 with recent PRs to dev2
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  9. changelog and versions

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  10. Merge branch 'paru_dev2' of https://github.com/DrTimothyAldenDavis/Su… 

    …iteSparse into paru_dev2
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  11. ParU FIXMEs

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