Merge pull request #61 from DiamondLightSource/copier-pyright

Update copier and adopt pyright

.copier-answers.yml

@@ -1,9 +1,11 @@
 # Changes here will be overwritten by Copier
-_commit: 2.1.0-40-g9e70b8b
+_commit: 2.3.0
 _src_path: gh:DiamondLightSource/python-copier-template
 author_email: [email protected]
 author_name: Gary Yendell
+component_lifecycle: experimental
 component_owner: user:mef65357
+component_type: library
 description: Control system agnostic framework for building Device support in Python
     that will work for both EPICS and Tango
 distribution_name: fastcs
@@ -14,4 +16,4 @@ github_org: DiamondLightSource
 package_name: fastcs
 pypi: true
 repo_name: FastCS
-type_checker: mypy
+type_checker: pyright

.github/CONTRIBUTING.md

@@ -24,4 +24,4 @@ It is recommended that developers use a [vscode devcontainer](https://code.visua
 
 This project was created using the [Diamond Light Source Copier Template](https://github.com/DiamondLightSource/python-copier-template) for Python projects.
 
-For more information on common tasks like setting up a developer environment, running the tests, and setting a pre-commit hook, see the template's [How-to guides](https://diamondlightsource.github.io/python-copier-template/2.1.0/how-to.html).
+For more information on common tasks like setting up a developer environment, running the tests, and setting a pre-commit hook, see the template's [How-to guides](https://diamondlightsource.github.io/python-copier-template/2.3.0/how-to.html).

.github/pages/make_switcher.py

@@ -1,3 +1,5 @@
+"""Make switcher.json to allow docs to switch between different versions."""
+
 import json
 import logging
 from argparse import ArgumentParser
@@ -6,6 +8,7 @@
 
 
 def report_output(stdout: bytes, label: str) -> list[str]:
+    """Print and return something received frm stdout."""
     ret = stdout.decode().strip().split("\n")
     print(f"{label}: {ret}")
     return ret
@@ -52,21 +55,20 @@ def get_versions(ref: str, add: str | None) -> list[str]:
     return versions
 
 
-def write_json(path: Path, repository: str, versions: str):
+def write_json(path: Path, repository: str, versions: list[str]):
+    """Write the JSON switcher to path."""
     org, repo_name = repository.split("/")
-    pages_url = f"https://{org}.github.io"
-    if repo_name != f"{org}.github.io":
-        # Only add the repo name if it isn't the source for the org pages site
-        pages_url += f"/{repo_name}"
     struct = [
-        {"version": version, "url": f"{pages_url}/{version}/"} for version in versions
+        {"version": version, "url": f"https://{org}.github.io/{repo_name}/{version}/"}
+        for version in versions
     ]
     text = json.dumps(struct, indent=2)
     print(f"JSON switcher:\n{text}")
     path.write_text(text, encoding="utf-8")
 
 
 def main(args=None):
+    """Parse args and write switcher."""
     parser = ArgumentParser(
         description="Make a versions.json file from gh-pages directories"
     )

.gitignore

@@ -55,6 +55,7 @@ cov.xml
 
 # Sphinx documentation
 docs/_build/
+docs/_api
 
 # PyBuilder
 target/

catalog-info.yaml

@@ -5,6 +5,6 @@ metadata:
   title: FastCS
   description: Control system agnostic framework for building Device support in Python that will work for both EPICS and Tango
 spec:
-  type: documentation
+  type: library
   lifecycle: experimental
   owner: user:mef65357

docs/_api.rst

@@ -0,0 +1,16 @@
+:orphan:
+
+..
+   This page is not included in the TOC tree, but must exist so that the
+   autosummary pages are generated for fastcs and all its
+   subpackages
+
+API
+===
+
+.. autosummary::
+    :toctree: _api
+    :template: custom-module-template.rst
+    :recursive:
+
+    fastcs

docs/_templates/custom-module-template.rst

@@ -0,0 +1,37 @@
+{{ ('``' + fullname + '``') | underline }}
+
+{%- set filtered_members = [] %}
+{%- for item in members %}
+    {%- if item in functions + classes + exceptions + attributes %}
+        {% set _ = filtered_members.append(item) %}
+    {%- endif %}
+{%- endfor %}
+
+.. automodule:: {{ fullname }}
+    :members:
+
+    {% block modules %}
+    {% if modules %}
+    .. rubric:: Submodules
+
+    .. autosummary::
+        :toctree:
+        :template: custom-module-template.rst
+        :recursive:
+    {% for item in modules %}
+        {{ item }}
+    {%- endfor %}
+    {% endif %}
+    {% endblock %}
+
+    {% block members %}
+    {% if filtered_members %}
+    .. rubric:: Members
+
+    .. autosummary::
+        :nosignatures:
+    {% for item in filtered_members %}
+        {{ item }}
+    {%- endfor %}
+    {% endif %}
+    {% endblock %}

docs/conf.py

@@ -1,8 +1,9 @@
-# Configuration file for the Sphinx documentation builder.
-#
-# This file only contains a selection of the most common options. For a full
-# list see the documentation:
-# https://www.sphinx-doc.org/en/master/usage/configuration.html
+"""Configuration file for the Sphinx documentation builder.
+
+This file only contains a selection of the most common options. For a full
+list see the documentation:
+https://www.sphinx-doc.org/en/master/usage/configuration.html
+"""
 
 import sys
 from pathlib import Path
@@ -32,6 +33,8 @@
 extensions = [
     # Use this for generating API docs
     "sphinx.ext.autodoc",
+    # and making summary tables at the top of API docs
+    "sphinx.ext.autosummary",
     # This can parse google style docstrings
     "sphinx.ext.napoleon",
     # For linking to external sphinx documentation
@@ -83,6 +86,12 @@
 # Don't inherit docstrings from baseclasses
 autodoc_inherit_docstrings = False
 
+# Document only what is in __all__
+autosummary_ignore_module_all = False
+
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ["_templates"]
+
 # Output graphviz directive produced images in a scalable format
 graphviz_output_format = "svg"
 

docs/reference.md

@@ -6,7 +6,7 @@ Technical reference material including APIs and release notes.
 :maxdepth: 1
 :glob:
 
-reference/*
+API <_api/fastcs>
 genindex
 Release Notes <https://github.com/DiamondLightSource/FastCS/releases>
 ```

pyproject.toml

@@ -14,7 +14,7 @@ dependencies = [
     "aioserial",
     "numpy",
     "pydantic",
-    "pvi~=0.9.0",
+    "pvi~=0.10.0",
     "pytango",
     "softioc",
 ]
@@ -26,11 +26,11 @@ requires-python = ">=3.11"
 [project.optional-dependencies]
 dev = [
     "copier",
-    "mypy",
     "myst-parser",
     "pipdeptree",
     "pre-commit",
     "pydata-sphinx-theme>=0.12",
+    "pyright",
     "pytest",
     "pytest-cov",
     "pytest-mock",
@@ -59,8 +59,9 @@ name = "Martin Gaughran"
 [tool.setuptools_scm]
 version_file = "src/fastcs/_version.py"
 
-[tool.mypy]
-ignore_missing_imports = true # Ignore missing stubs in imported modules
+[tool.pyright]
+typeCheckingMode = "standard"
+reportMissingImports = false # Ignore missing stubs in imported modules
 
 [tool.pytest.ini_options]
 # Run pytest with all our checkers, and don't spam us with massive tracebacks on error
@@ -93,12 +94,12 @@ passenv = *
 allowlist_externals =
     pytest
     pre-commit
-    mypy
+    pyright
     sphinx-build
     sphinx-autobuild
 commands =
     pre-commit: pre-commit run --all-files --show-diff-on-failure {posargs}
-    type-checking: mypy src tests {posargs}
+    type-checking: pyright src tests {posargs}
     tests: pytest --cov=fastcs --cov-report term --cov-report xml:cov.xml {posargs}
     docs: sphinx-{posargs:build -EW --keep-going} -T docs build/html
 """

src/fastcs/__init__.py

@@ -1,3 +1,11 @@
+"""Top level API.
+
+.. data:: __version__
+    :type: str
+
+    Version number as calculated by https://github.com/pypa/setuptools_scm
+"""
+
 from ._version import __version__
 
 __all__ = ["__version__"]

src/fastcs/__main__.py

@@ -1,16 +1,24 @@
+"""Interface for ``python -m fastcs``."""
+
 from argparse import ArgumentParser
+from collections.abc import Sequence
 
 from . import __version__
 
 __all__ = ["main"]
 
 
-def main(args=None):
+def main(args: Sequence[str] | None = None) -> None:
+    """Argument parser for the CLI."""
     parser = ArgumentParser()
-    parser.add_argument("-v", "--version", action="version", version=__version__)
-    args = parser.parse_args(args)
+    parser.add_argument(
+        "-v",
+        "--version",
+        action="version",
+        version=__version__,
+    )
+    parser.parse_args(args)
 
 
-# test with: python -m fastcs
 if __name__ == "__main__":
     main()

src/fastcs/backends/epics/gui.py

@@ -7,11 +7,11 @@
     LED,
     ButtonPanel,
     ComboBox,
-    Component,
+    ComponentUnion,
     Device,
     Grid,
     Group,
-    ReadWidget,
+    ReadWidgetUnion,
     SignalR,
     SignalRW,
     SignalW,
@@ -22,7 +22,7 @@
     TextWrite,
     ToggleButton,
     Tree,
-    WriteWidget,
+    WriteWidgetUnion,
 )
 from pydantic import ValidationError
 
@@ -56,7 +56,7 @@ def _get_pv(self, attr_path: list[str], name: str):
         return f"{attr_prefix}:{name.title().replace('_', '')}"
 
     @staticmethod
-    def _get_read_widget(attribute: AttrR) -> ReadWidget:
+    def _get_read_widget(attribute: AttrR) -> ReadWidgetUnion:
         match attribute.datatype:
             case Bool():
                 return LED()
@@ -68,7 +68,7 @@ def _get_read_widget(attribute: AttrR) -> ReadWidget:
                 raise FastCSException(f"Unsupported type {type(datatype)}: {datatype}")
 
     @staticmethod
-    def _get_write_widget(attribute: AttrW) -> WriteWidget:
+    def _get_write_widget(attribute: AttrW) -> WriteWidgetUnion:
         match attribute.allowed_values:
             case allowed_values if allowed_values is not None:
                 return ComboBox(choices=allowed_values)
@@ -87,7 +87,7 @@ def _get_write_widget(attribute: AttrW) -> WriteWidget:
 
     def _get_attribute_component(
         self, attr_path: list[str], name: str, attribute: Attribute
-    ):
+    ) -> SignalR | SignalW | SignalRW:
         pv = self._get_pv(attr_path, name)
         name = name.title().replace("_", "")
 
@@ -108,6 +108,8 @@ def _get_attribute_component(
             case AttrW():
                 write_widget = self._get_write_widget(attribute)
                 return SignalW(name=name, write_pv=pv, write_widget=write_widget)
+            case _:
+                raise FastCSException(f"Unsupported attribute type: {type(attribute)}")
 
     def _get_command_component(self, attr_path: list[str], name: str):
         pv = self._get_pv(attr_path, name)
@@ -136,8 +138,8 @@ def create_gui(self, options: EpicsGUIOptions | None = None) -> None:
         formatter = DLSFormatter()
         formatter.format(device, options.output_path)
 
-    def extract_mapping_components(self, mapping: SingleMapping) -> list[Component]:
-        components: Tree[Component] = []
+    def extract_mapping_components(self, mapping: SingleMapping) -> Tree:
+        components: Tree = []
         attr_path = mapping.controller.path
 
         for name, sub_controller in mapping.controller.get_sub_controllers().items():
@@ -151,7 +153,7 @@ def extract_mapping_components(self, mapping: SingleMapping) -> list[Component]:
                 )
             )
 
-        groups: dict[str, list[Component]] = {}
+        groups: dict[str, list[ComponentUnion]] = {}
         for attr_name, attribute in mapping.attributes.items():
             try:
                 signal = self._get_attribute_component(