deploy: 262f759

.buildinfo

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 51b00bc5cf129f0cdb92ff41214df90d
+config: 57e5d8f111e99969288ecac88b45fbc0
 tags: 645f666f9bcd5a90fca523b33c5a78b7

_modules/xugrid/plot/plot.html

@@ -965,7 +965,6 @@ <h1>Source code for xugrid.plot.plot</h1><div class="highlight"><pre>
 <span class="sd">    **kwargs : optional</span>
 <span class="sd">        Additional keyword arguments for Matplotlib.</span>
 <span class="sd">    &quot;&quot;&quot;</span>
-    <span class="n">darray</span> <span class="o">=</span> <span class="n">darray</span><span class="o">.</span><span class="n">squeeze</span><span class="p">()</span><span class="o">.</span><span class="n">compute</span><span class="p">()</span>
 
     <span class="n">dim</span> <span class="o">=</span> <span class="n">darray</span><span class="o">.</span><span class="n">dims</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
     <span class="n">kwargs</span><span class="p">[</span><span class="s2">&quot;ax&quot;</span><span class="p">]</span> <span class="o">=</span> <span class="n">ax</span>
@@ -1011,7 +1010,7 @@ <h1>Source code for xugrid.plot.plot</h1><div class="highlight"><pre>
             <span class="p">)</span>
 
         <span class="bp">self</span><span class="o">.</span><span class="n">grid</span> <span class="o">=</span> <span class="n">grid</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">darray</span> <span class="o">=</span> <span class="n">darray</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">darray</span> <span class="o">=</span> <span class="n">darray</span><span class="o">.</span><span class="n">squeeze</span><span class="p">()</span><span class="o">.</span><span class="n">compute</span><span class="p">()</span>
 
     <span class="k">def</span> <span class="fm">__call__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
         <span class="k">return</span> <span class="n">plot</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">darray</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">)</span>

_modules/xugrid/regrid/regridder.html

@@ -392,10 +392,8 @@ <h1>Source code for xugrid.regrid.regridder</h1><div class="highlight"><pre>
     <span class="kn">import</span> <span class="nn">dask.array</span>
 
     <span class="n">DaskArray</span> <span class="o">=</span> <span class="n">dask</span><span class="o">.</span><span class="n">array</span><span class="o">.</span><span class="n">Array</span>
-    <span class="n">DaskRechunk</span> <span class="o">=</span> <span class="n">dask</span><span class="o">.</span><span class="n">array</span><span class="o">.</span><span class="n">rechunk</span>
 <span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
     <span class="n">DaskArray</span> <span class="o">=</span> <span class="p">()</span>
-    <span class="n">DaskRechunk</span> <span class="o">=</span> <span class="p">()</span>
 
 <span class="kn">import</span> <span class="nn">xugrid</span>
 <span class="kn">from</span> <span class="nn">xugrid.constants</span> <span class="kn">import</span> <span class="n">FloatArray</span>
@@ -523,12 +521,8 @@ <h1>Source code for xugrid.regrid.regridder</h1><div class="highlight"><pre>
         <span class="n">source</span> <span class="o">=</span> <span class="n">source</span><span class="o">.</span><span class="n">reshape</span><span class="p">((</span><span class="o">-</span><span class="mi">1</span><span class="p">,</span> <span class="n">source_grid</span><span class="o">.</span><span class="n">size</span><span class="p">))</span>
 
         <span class="n">size</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">size</span>
-
         <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">source</span><span class="p">,</span> <span class="n">DaskArray</span><span class="p">):</span>
-            <span class="c1"># for DaskArray&#39;s from multiple partitions, rechunk first to single size per dimension</span>
-            <span class="c1"># for now always rechunk, could be optional only when explicit chunks in single dimension</span>
-            <span class="n">source</span> <span class="o">=</span> <span class="n">DaskRechunk</span><span class="p">(</span><span class="n">source</span><span class="p">,</span> <span class="n">source</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
-            <span class="n">chunks</span> <span class="o">=</span> <span class="n">source</span><span class="o">.</span><span class="n">chunks</span><span class="p">[:</span> <span class="o">-</span><span class="n">source_grid</span><span class="o">.</span><span class="n">ndim</span><span class="p">]</span> <span class="o">+</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
+            <span class="n">chunks</span> <span class="o">=</span> <span class="n">source</span><span class="o">.</span><span class="n">chunks</span><span class="p">[:</span> <span class="o">-</span><span class="n">source_grid</span><span class="o">.</span><span class="n">ndim</span><span class="p">]</span> <span class="o">+</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">shape</span><span class="p">,)</span>
             <span class="n">out</span> <span class="o">=</span> <span class="n">dask</span><span class="o">.</span><span class="n">array</span><span class="o">.</span><span class="n">map_blocks</span><span class="p">(</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">_regrid</span><span class="p">,</span>  <span class="c1"># func</span>
                 <span class="n">source</span><span class="p">,</span>  <span class="c1"># *args</span>
@@ -538,16 +532,14 @@ <h1>Source code for xugrid.regrid.regridder</h1><div class="highlight"><pre>
                 <span class="n">chunks</span><span class="o">=</span><span class="n">chunks</span><span class="p">,</span>
                 <span class="n">meta</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">((),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">source</span><span class="o">.</span><span class="n">dtype</span><span class="p">),</span>
             <span class="p">)</span>
-            <span class="c1"># TODO: for now we compute first, since .reshape and  dask.array.reshape</span>
-            <span class="c1"># does not reshapes the underlying data somehow. This need to be evaluated.</span>
-            <span class="n">out</span> <span class="o">=</span> <span class="n">out</span><span class="o">.</span><span class="n">compute</span><span class="p">()</span>
         <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">source</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
             <span class="n">out</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_regrid</span><span class="p">(</span><span class="n">source</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">_weights</span><span class="p">,</span> <span class="n">size</span><span class="p">)</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span>
                 <span class="s2">&quot;Expected dask.array.Array or numpy.ndarray. Received: &quot;</span>
                 <span class="sa">f</span><span class="s2">&quot;</span><span class="si">{</span><span class="nb">type</span><span class="p">(</span><span class="n">source</span><span class="p">)</span><span class="o">.</span><span class="vm">__name__</span><span class="si">}</span><span class="s2">&quot;</span>
             <span class="p">)</span>
+
         <span class="c1"># E.g.: sizes of (&quot;time&quot;, &quot;layer&quot;) + (&quot;y&quot;, &quot;x&quot;)</span>
         <span class="n">out_shape</span> <span class="o">=</span> <span class="n">first_dims_shape</span> <span class="o">+</span> <span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">shape</span>
         <span class="k">return</span> <span class="n">out</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">out_shape</span><span class="p">)</span>
@@ -588,7 +580,12 @@ <h1>Source code for xugrid.regrid.regridder</h1><div class="highlight"><pre>
         <span class="k">if</span> <span class="nb">type</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="p">)</span> <span class="ow">is</span> <span class="n">StructuredGrid2d</span><span class="p">:</span>
             <span class="n">source_dims</span> <span class="o">=</span> <span class="p">(</span><span class="s2">&quot;y&quot;</span><span class="p">,</span> <span class="s2">&quot;x&quot;</span><span class="p">)</span>
             <span class="n">regridded</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">regrid_dataarray</span><span class="p">(</span><span class="nb">object</span><span class="p">,</span> <span class="n">source_dims</span><span class="p">)</span>
-            <span class="n">regridded</span> <span class="o">=</span> <span class="n">regridded</span><span class="o">.</span><span class="n">assign_coords</span><span class="p">(</span><span class="n">coords</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">coords</span><span class="p">)</span>
+            <span class="n">regridded</span> <span class="o">=</span> <span class="n">regridded</span><span class="o">.</span><span class="n">assign_coords</span><span class="p">(</span>
+                <span class="n">coords</span><span class="o">=</span><span class="p">{</span>
+                    <span class="s2">&quot;y&quot;</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">flip</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">ybounds</span><span class="o">.</span><span class="n">midpoints</span><span class="p">),</span>
+                    <span class="s2">&quot;x&quot;</span><span class="p">:</span> <span class="bp">self</span><span class="o">.</span><span class="n">_target</span><span class="o">.</span><span class="n">xbounds</span><span class="o">.</span><span class="n">midpoints</span><span class="p">,</span>
+                <span class="p">}</span>
+            <span class="p">)</span>
             <span class="k">return</span> <span class="n">regridded</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="n">source_dims</span> <span class="o">=</span> <span class="p">(</span><span class="nb">object</span><span class="o">.</span><span class="n">ugrid</span><span class="o">.</span><span class="n">grid</span><span class="o">.</span><span class="n">face_dimension</span><span class="p">,)</span>

_sources/changelog.rst.txt

@@ -9,15 +9,21 @@ The format is based on `Keep a Changelog`_, and this project adheres to
 Unreleased
 ----------
 
+Fixed
+~~~~~
+
+- Computing indexer to avoid dask array of unknown shape upon plotting.
+  See `#117 <https://github.com/Deltares/xugrid/issues/117>`_.
+
+
 [0.6.1] 2023-07-07
 ------------------
 
 Fixed
 ~~~~~
 
-- fillvalue was not properly replaced in cast.
-  See `#113 <https://github.com/Deltares/xugrid/issues/113>`_,
-  which was introduced by fixing `#101 <https://github.com/Deltares/xugrid/issues/101>`_. 
+- Fillvalue was not properly replaced in cast.
+  See `#113 <https://github.com/Deltares/xugrid/issues/113>`_. 
 
 
 [0.6.0] 2023-07-05

_sources/examples-dev/sg_execution_times.rst.txt

@@ -6,8 +6,8 @@
 
 Computation times
 =================
-**00:01.786** total execution time for **examples-dev** files:
+**00:01.929** total execution time for **examples-dev** files:
 
 +----------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples-dev_voronoi.py` (``voronoi.py``) | 00:01.786 | 0.0 MB |
+| :ref:`sphx_glr_examples-dev_voronoi.py` (``voronoi.py``) | 00:01.929 | 0.0 MB |
 +----------------------------------------------------------+-----------+--------+

_sources/examples-dev/voronoi.rst.txt

@@ -630,7 +630,7 @@ The figure shows:
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  1.786 seconds)
+   **Total running time of the script:** ( 0 minutes  1.929 seconds)
 
 
 .. _sphx_glr_download_examples-dev_voronoi.py:

_sources/examples/connectivity.rst.txt

@@ -129,7 +129,7 @@ By default, the border value for binary erosion is set to ``False`` (equal to
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e21e1bb0>
+    <matplotlib.collections.PolyCollection object at 0x7f000cd20be0>
 
 
 
@@ -165,7 +165,7 @@ start by setting a single value in the center of the grid to ``True``.
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e3adb430>
+    <matplotlib.collections.PolyCollection object at 0x7f000e1b60d0>
 
 
 
@@ -200,7 +200,7 @@ alternative border value:
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e31103d0>
+    <matplotlib.collections.PolyCollection object at 0x7f000f2bbb50>
 
 
 
@@ -238,7 +238,7 @@ analyse connected parts of the mesh.
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e2d2bfd0>
+    <matplotlib.collections.PolyCollection object at 0x7f000d7bf490>
 
 
 
@@ -272,7 +272,7 @@ Tesselation.
  .. code-block:: none
 
 
-    <matplotlib.collections.LineCollection object at 0x7ff7e31cdfd0>
+    <matplotlib.collections.LineCollection object at 0x7f000cd83b50>
 
 
 
@@ -316,7 +316,7 @@ the original.
  .. code-block:: none
 
 
-    <matplotlib.collections.LineCollection object at 0x7ff7e3bee940>
+    <matplotlib.collections.LineCollection object at 0x7f00175165e0>
 
 
 
@@ -355,7 +355,7 @@ We can break down one of the Voronoi tesselations from above into triangles:
  .. code-block:: none
 
 
-    <matplotlib.collections.LineCollection object at 0x7ff7e34b5bb0>
+    <matplotlib.collections.LineCollection object at 0x7f000da32fd0>
 
 
 
@@ -409,7 +409,7 @@ the upper and lower parts:
  .. code-block:: none
 
 
-    <matplotlib.collections.LineCollection object at 0x7ff7e2c6cc10>
+    <matplotlib.collections.LineCollection object at 0x7f00177fd0d0>
 
 
 
@@ -439,7 +439,7 @@ We can now use Laplace interpolation to fill the gaps in the grid.
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e2fd5370>
+    <matplotlib.collections.PolyCollection object at 0x7f000d8fb850>
 
 
 
@@ -480,7 +480,7 @@ To illustrate, let's take a look at the connectivity matrix of the Xoxo grid.
  .. code-block:: none
 
 
-    <matplotlib.image.AxesImage object at 0x7ff7ec8e2d60>
+    <matplotlib.image.AxesImage object at 0x7f001747cfd0>
 
 
 
@@ -516,14 +516,14 @@ locality:
  .. code-block:: none
 
 
-    <matplotlib.image.AxesImage object at 0x7ff7e3275940>
+    <matplotlib.image.AxesImage object at 0x7f000de103a0>
 
 
 
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  1.835 seconds)
+   **Total running time of the script:** ( 0 minutes  1.980 seconds)
 
 
 .. _sphx_glr_download_examples_connectivity.py:

_sources/examples/overlap_regridder.rst.txt

@@ -114,7 +114,7 @@ some bathymetry) of the Netherlands, and a coarser target grid.
  .. code-block:: none
 
 
-    <matplotlib.collections.LineCollection object at 0x7ff7e2dd4cd0>
+    <matplotlib.collections.LineCollection object at 0x7f000d8101f0>
 
 
 
@@ -204,7 +204,7 @@ conservative methods, such as conductance:
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e2316b80>
+    <matplotlib.collections.PolyCollection object at 0x7f000d965340>
 
 
 
@@ -282,7 +282,7 @@ To use our custom method, we provide at initialization of the OverlapRegridder:
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e3a67e20>
+    <matplotlib.collections.PolyCollection object at 0x7f001766c760>
 
 
 
@@ -322,7 +322,7 @@ function can deal with NaN values! -- hence ``nanpercentile`` rather than
  .. code-block:: none
 
 
-    <matplotlib.collections.PolyCollection object at 0x7ff7e3ccd910>
+    <matplotlib.collections.PolyCollection object at 0x7f000e6d4130>
 
 
 
@@ -333,7 +333,7 @@ function can deal with NaN values! -- hence ``nanpercentile`` rather than
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  5.416 seconds)
+   **Total running time of the script:** ( 0 minutes  6.162 seconds)
 
 
 .. _sphx_glr_download_examples_overlap_regridder.py: