run pre-commit on all files

Deltares · Jul 6, 2023 · 7e914cd · 7e914cd
1 parent 3c346fa
commit 7e914cd
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Showing 19 changed files with 238 additions and 328 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -1,10 +1,11 @@
+---
 name: ci
 
 on:
   push:
-    branches: [ main ]
+    branches: [main]
   pull_request:
-    branches: [ main ]
+    branches: [main]
 
 jobs:
   build:
@@ -19,27 +20,27 @@ jobs:
         os: ["windows-latest"]
 
     steps:
-    - uses: actions/checkout@v3
-    - uses: conda-incubator/setup-miniconda@v2
-      with:
-        python-version: ${{ matrix.python-version }}
-        miniforge-variant: Mambaforge
-        channels: conda-forge
-        channel-priority: strict
-        environment-file: envs/hydromt-delft3dfm.yml
-        activate-environment: hydromt-delft3dfm
+      - uses: actions/checkout@v3
+      - uses: conda-incubator/setup-miniconda@v2
+        with:
+          python-version: ${{ matrix.python-version }}
+          miniforge-variant: Mambaforge
+          channels: conda-forge
+          channel-priority: strict
+          environment-file: envs/hydromt-delft3dfm.yml
+          activate-environment: hydromt-delft3dfm
 
-    - name: Conda info
-      run: |
-       conda info
-       conda list
-     
-    - name: Install hydromt_delft3dfm
-      run: |
-        flit install --pth-file
-        hydromt --models
-        
-    - name: Test with pytest
-      run: |
-        python -m pytest --cov=hydromt_delft3dfm --cov-report xml --cov-report term
-    - uses: codecov/codecov-action@v1
+      - name: Conda info
+        run: |
+          conda info
+          conda list
+
+      - name: Install hydromt_delft3dfm
+        run: |
+          flit install --pth-file
+          hydromt --models
+
+      - name: Test with pytest
+        run: |
+          python -m pytest --cov=hydromt_delft3dfm --cov-report xml --cov-report term
+      - uses: codecov/codecov-action@v1
diff --git a/envs/hydromt-delft3dfm.yml b/envs/hydromt-delft3dfm.yml
@@ -1,3 +1,4 @@
+---
 # note that these are the developer dependencies
 name: hydromt-delft3dfm
 
@@ -15,7 +16,7 @@ dependencies:
   - pandas
   - pip
   - pre-commit # linting
-  - pydata-sphinx-theme  # docs
+  - pydata-sphinx-theme # docs
   - pygeos
   - pyproj
   - pytest # tests
@@ -28,11 +29,9 @@ dependencies:
   - shapely>=2.0.0
   - sphinx # docs
   - sphinx-design # docs
-  - xarray 
+  - xarray
   - xugrid
   - networkx
   - pip:
-    - hydrolib-core
-    - meshkernel
-
-
+      - hydrolib-core
+      - meshkernel
diff --git a/hydromt_delft3dfm/data/channels/spacing_pipe.csv b/hydromt_delft3dfm/data/channels/spacing_pipe.csv
@@ -5,4 +5,4 @@ pipe,circle,0.8,24
 pipe,circle,1.0,24
 pipe,circle,1.2,24
 pipe,rectangle,,24
-pipe,trapeze,,0
+pipe,trapeze,,0
diff --git a/hydromt_delft3dfm/data/dflowfm/DFlowFM.mdu b/hydromt_delft3dfm/data/dflowfm/DFlowFM.mdu
@@ -11,7 +11,7 @@ AutoStart         = 0
 PathsRelativeToParent= 0
 
 [geometry]
-NetFile           = 
+NetFile           =
 BathymetryFile    =
 DryPointsFile     =
 GridEnclosureFile =
@@ -20,16 +20,16 @@ LandBoundaryFile  =
 ThinDamFile       =
 FixedWeirFile     =
 PillarFile        =
-StructureFile     = 
+StructureFile     =
 VertplizFile      =
-CrossDefFile      = 
-CrossLocFile      = 
-FrictFile         = 
-StorageNodeFile   = 
-BranchFile        = 
+CrossDefFile      =
+CrossLocFile      =
+FrictFile         =
+StorageNodeFile   =
+BranchFile        =
 RoofsFile         =
 ProfdefxyzFile    =
-IniFieldFile      = 
+IniFieldFile      =
 Uniformwidth1D    = 2
 ManholeFile       =
 WaterLevIni       = 0
@@ -179,7 +179,7 @@ RestartDateTime   =
 
 [external forcing]
 ExtForceFile      =
-ExtForceFileNew   = 
+ExtForceFileNew   =
 QExt              = 0
 
 [trachytopes]

diff --git a/hydromt_delft3dfm/data/landuse/corine_mapping.csv b/hydromt_delft3dfm/data/landuse/corine_mapping.csv
@@ -44,4 +44,4 @@ corine,description,landuse,roughness_manning,infiltcap
 521,Coastal lagoons,521,0.0150,600.0
 522,Estuaries,522,0.150,600.0
 523,Sea and ocean,523,0.010,600.0
-999,No data,999,-999.0,-999.0
+999,No data,999,-999.0,-999.0
diff --git a/hydromt_delft3dfm/data/landuse/vito_mapping.csv b/hydromt_delft3dfm/data/landuse/vito_mapping.csv
@@ -21,4 +21,4 @@ vito,description                                             ,landuse,roughness_
 125 ,Open forest mixed                                       ,125    ,0.055            ,96.0    ,3.0
 126 ,Open forest unknown                                     ,126    ,0.055            ,96.0    ,3.0
 200 ,Open sea                                                ,200    ,0.025            ,0.0    ,3.0
-0   ,No data                                                 ,-999.0      ,-999.0           ,-999.0   ,-999.0
+0   ,No data                                                 ,-999.0      ,-999.0           ,-999.0   ,-999.0
diff --git a/hydromt_delft3dfm/data/parameters_data.yml b/hydromt_delft3dfm/data/parameters_data.yml
@@ -1,3 +1,4 @@
+---
 vito_mapping:
   data_type: DataFrame
   driver: csv