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Add MOSAiC and ARCRC ontologies
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@amoeba
amoeba committed Oct 8, 2021
1 parent 6eee566 commit 23f92d0
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Showing 3 changed files with 152,237 additions and 23 deletions.
47 changes: 24 additions & 23 deletions src/main/resources/application-context-ontology-model-service.xml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,4 @@
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:p="http://www.springframework.org/schema/p"
xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd">
<beans xmlns="http://www.springframework.org/schema/beans" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:p="http://www.springframework.org/schema/p" xsi:schemaLocation="http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd">

<bean id="ontologyModelService" class="org.dataone.cn.indexer.annotation.OntologyModelService">
<property name="fieldList">
Expand All @@ -11,7 +8,7 @@
</list>
</property>

<property name="ontologyList">
<property name="ontologyList">
<list>
<value>http://purl.dataone.org/ontologies/observation/d1-ECSO.owl</value>
<value>http://purl.dataone.org/ontologies/provenance/ProvONE/v1/owl/provone.owl</value>
Expand All @@ -29,6 +26,8 @@
<value>http://ecoinformatics.org/oboe/oboe.1.2/oboe-chemistry.owl</value>
<value>http://ecoinformatics.org/oboe/oboe.1.2/oboe-anatomy.owl</value>
<value>http://ecoinformatics.org/oboe-ext/sbclter.1.0/oboe-sbclter.owl</value>
<value>https://purl.dataone.org/odo/MOSAIC_</value>
<value>http://purl.dataone.org/odo/ARCRC</value>
</list>
</property>

Expand All @@ -37,24 +36,26 @@

<bean id="alt.entries" class="java.util.HashMap">
<constructor-arg>
<map key-type="java.lang.String" value-type="java.lang.String">
<entry key="http://purl.dataone.org/ontologies/observation/d1-ECSO.owl" value="file:src/main/resources/ontologies/ECSO.owl" />
<entry key="http://purl.dataone.org/ontologies/provenance/ProvONE/v1/owl/provone.owl" value="file:src/main/resources/ontologies/provone.owl" />
<entry key="http://purl.obolibrary.org/obo/envo.owl" value="file:src/main/resources/ontologies/envo.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-owl.owl" value="file:src/main/resources/ontologies/oboe.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl" value="file:src/main/resources/ontologies/oboe-core.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-characteristics.owl" value="file:src/main/resources/ontologies/oboe-characteristics.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-standards.owl" value="file:src/main/resources/ontologies/oboe-standards.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-spatial.owl" value="file:src/main/resources/ontologies/oboe-spatial.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-temporal.owl" value="file:src/main/resources/ontologies/oboe-temporal.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-taxa.owl" value="file:src/main/resources/ontologies/oboe-taxa.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-biology.owl" value="file:src/main/resources/ontologies/oboe-biology.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-ecology.owl" value="file:src/main/resources/ontologies/oboe-ecology.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-environment.owl" value="file:src/main/resources/ontologies/oboe-environment.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-chemistry.owl" value="file:src/main/resources/ontologies/oboe-chemistry.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-anatomy.owl" value="file:src/main/resources/ontologies/oboe-anatomy.owl" />
<entry key="http://ecoinformatics.org/oboe-ext/sbclter.1.0/oboe-sbclter.owl" value="file:src/main/resources/ontologies/oboe-sbclter.owl" />
</map>
<map key-type="java.lang.String" value-type="java.lang.String">
<entry key="http://purl.dataone.org/ontologies/observation/d1-ECSO.owl" value="file:src/main/resources/ontologies/ECSO.owl" />
<entry key="http://purl.dataone.org/ontologies/provenance/ProvONE/v1/owl/provone.owl" value="file:src/main/resources/ontologies/provone.owl" />
<entry key="http://purl.obolibrary.org/obo/envo.owl" value="file:src/main/resources/ontologies/envo.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-owl.owl" value="file:src/main/resources/ontologies/oboe.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl" value="file:src/main/resources/ontologies/oboe-core.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-characteristics.owl" value="file:src/main/resources/ontologies/oboe-characteristics.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-standards.owl" value="file:src/main/resources/ontologies/oboe-standards.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-spatial.owl" value="file:src/main/resources/ontologies/oboe-spatial.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-temporal.owl" value="file:src/main/resources/ontologies/oboe-temporal.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-taxa.owl" value="file:src/main/resources/ontologies/oboe-taxa.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-biology.owl" value="file:src/main/resources/ontologies/oboe-biology.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-ecology.owl" value="file:src/main/resources/ontologies/oboe-ecology.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-environment.owl" value="file:src/main/resources/ontologies/oboe-environment.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-chemistry.owl" value="file:src/main/resources/ontologies/oboe-chemistry.owl" />
<entry key="http://ecoinformatics.org/oboe/oboe.1.2/oboe-anatomy.owl" value="file:src/main/resources/ontologies/oboe-anatomy.owl" />
<entry key="http://ecoinformatics.org/oboe-ext/sbclter.1.0/oboe-sbclter.owl" value="file:src/main/resources/ontologies/oboe-sbclter.owl" />
<entry key="https://purl.dataone.org/odo/MOSAIC_" value="file:src/main/resources/ontologies/MOSAiC.owl" />
<entry key="http://purl.dataone.org/odo/ARCRC" value="file:src/main/resources/ontologies/ARCRC.owl" />
</map>
</constructor-arg>
</bean>

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