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- name: filter_blacklist test_filter_blacklist_single | ||
command: nextflow run ./tests/subworkflows/CCBR/filter_blacklist/main.nf -entry test_filter_blacklist_single -c tests/config/nextflow.config -c tests/config/test_data_CCBR.config | ||
tags: | ||
- subworkflows/filter_blacklist | ||
files: | ||
- path: output/bam2fastq/test.R1.fastq.gz | ||
- name: filter_blacklist test_filter_blacklist_paired | ||
command: nextflow run ./tests/subworkflows/CCBR/filter_blacklist/main.nf -entry test_filter_blacklist_paired -c tests/config/nextflow.config -c tests/config/test_data_CCBR.config | ||
tags: | ||
- subworkflows/filter_blacklist | ||
files: | ||
- path: output/bam2fastq/test.R1.fastq.gz | ||
- path: output/bam2fastq/test.R2.fastq.gz | ||
- name: filter_blacklist test_filter_blacklist_single stub | ||
command: nextflow run ./tests/subworkflows/CCBR/filter_blacklist/main.nf -entry test_filter_blacklist_single -c tests/config/nextflow.config -c tests/config/test_data_CCBR.config -stub | ||
tags: | ||
- subworkflows/filter_blacklist | ||
files: | ||
- path: output/bam2fastq/test.R1.fastq.gz |
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