fix: emit optional unpaired reads

CCBR · Oct 19, 2023 · 2ac0809 · 2ac0809
1 parent c5625a0
commit 2ac0809
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/CCBR/custom/bam_to_fastq/main.nf b/modules/CCBR/custom/bam_to_fastq/main.nf
@@ -8,7 +8,7 @@ process BAM_TO_FASTQ {
 
     output:
         tuple val(meta), path("*.R?.fastq*"),       emit: reads
-        tuple val(meta), path("*.unpaired.fastq*"), optional: true
+        tuple val(meta), path("*.unpaired.fastq*"), emit: unpaired, optional: true
 
     when:
         task.ext.when == null || task.ext.when