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Refactor with fixes from Champagne QC #138

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Refactor with fixes from Champagne QC

Refactor with fixes from Champagne QC #138

Triggered via pull request November 1, 2023 14:17
@kelly-sovacoolkelly-sovacool
synchronize #32
champagne-qc-fixes
Status Failure
Total duration 7m 0s
Artifacts 1

test.yml

on: pull_request
pytest-changes
6s
pytest-changes
nf-test-changes
4s
nf-test-changes
prettier
6s
prettier
Matrix: nf-core-lint
Matrix: pytest
Matrix: nf-test
confirm-pass
3s
confirm-pass
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6 errors and 3 warnings
nf-core-lint (subworkflows/filter_blacklist)
Process completed with exit code 1.
nf-core-lint (khmer/uniquekmers)
Process completed with exit code 1.
pytest (subworkflows/filter_blacklist, docker)
Process completed with exit code 1.
pytest (bwa/mem, docker)
Process completed with exit code 1.
pytest (picard/samtofastq, docker)
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
pytest (subworkflows/filter_blacklist, docker)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
pytest (bwa/mem, docker)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
pytest (picard/samtofastq, docker)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Artifacts

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logs-docker- Expired
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