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Setup unit tests with pytest & nf-test #3

Setup unit tests with pytest & nf-test

Setup unit tests with pytest & nf-test #3

Triggered via pull request October 3, 2023 16:36
@kelly-sovacoolkelly-sovacool
synchronize #4
tests
Status Failure
Total duration 6m 54s
Artifacts 2

test.yml

on: pull_request
pytest-changes
4s
pytest-changes
nf-test-changes
7s
nf-test-changes
prettier
16s
prettier
editorconfig
6s
editorconfig
Matrix: nf-core-lint
Matrix: pytest
Matrix: nf-test
confirm-pass
6s
confirm-pass
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Annotations

4 errors and 4 warnings
editorconfig
Process completed with exit code 1.
pytest (bwa/mem, docker)
Process completed with exit code 1.
pytest (bwa/mem, singularity)
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
pytest (bwa/mem, docker)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
pytest (bwa/index, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
pytest (cutadapt, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
pytest (bwa/mem, singularity)
The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v7, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Artifacts

Produced during runtime
Name Size
logs-docker- Expired
898 KB
logs-singularity- Expired
896 KB