Added parquet-converter dependency for functional tests #8

	name: Run tox

	on:
	pull_request:
	push:
	branches:
	- main
	jobs:
	build:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ['3.10']
	steps:
	- uses: actions/checkout@v2

	- name: Set up Apache Arrow repositories
	run: \|
	sudo apt-get update
	sudo apt-get install -y ca-certificates lsb-release wget
	wget https://apache.jfrog.io/artifactory/arrow/$(lsb_release --id --short \| tr 'A-Z' 'a-z')/apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb
	sudo apt-get install -y ./apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb
	sudo apt-get update

	- name: Install build dependencies
	run: \|
	sudo apt-get install -y cmake g++ libhdf5-openmpi-dev librange-v3-dev ninja-build nlohmann-json3-dev
	sudo apt-get install -y libarrow-dev libparquet-dev

	- name: Configure and build
	run: \|
	cmake -B build -S . -GNinja \
	-DCMAKE_INSTALL_PREFIX=$PWD/install \
	-DCMAKE_CXX_COMPILER=$(which mpicxx)
	cmake --build build
	ctest --test-dir build --output-on-failure
	cmake --install build

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v2
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip setuptools
	pip install tox-gh-actions

	- name: Run tox
	run: \|
	tox -e lint
	tox -e functional

	- name: Upload to codecov
	if: ${{matrix.python-version == '3.10'}}
	uses: codecov/codecov-action@v1
	with:
	fail_ci_if_error: false
	files: ./coverage.xml
	flags: pytest
	name: "connectome-manipulator-py310"

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