Flexible std::strings.
#861
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: HighFive_CI | |
| concurrency: | |
| group: ${{ github.workflow }}#${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: | |
| - ci_test | |
| - release/** | |
| pull_request: | |
| branches: | |
| - master | |
| - release/** | |
| paths-ignore: | |
| - '**.md' | |
| - '**.rst' | |
| - 'doc/**' | |
| env: | |
| HOMEBREW_NO_AUTO_UPDATE: 1 # for reproducibility, dont autoupdate | |
| BUILD_TYPE: RelWithDebInfo | |
| INSTALL_DIR: install | |
| jobs: | |
| # Job testing compiling on several Ubuntu systems + MPI | |
| # ========================================================= | |
| # | |
| # For 20.04: bare and activate Boost, OpenCV | |
| # For latest: activate Boost, Eigen, OpenCV, with Ninja | |
| # | |
| # XTensor tests are run for conda/mamba and MacOS | |
| Linux_MPI: | |
| runs-on: ${{matrix.config.os}} | |
| name: Linux_MPI (${{toJson(matrix.config)}}) | |
| strategy: | |
| matrix: | |
| include: | |
| - config: | |
| os: ubuntu-20.04 | |
| pkgs: '' | |
| flags: '-DHIGHFIVE_USE_BOOST:Bool=OFF' | |
| - config: | |
| os: ubuntu-20.04 | |
| pkgs: 'libboost-all-dev libopencv-dev' | |
| flags: '-DHIGHFIVE_USE_OPENCV:Bool=ON -GNinja' | |
| - config: | |
| os: ubuntu-latest | |
| pkgs: 'libboost-all-dev libeigen3-dev libopencv-dev' | |
| flags: '-DHIGHFIVE_USE_EIGEN:Bool=ON -DHIGHFIVE_USE_OPENCV:Bool=ON -GNinja' | |
| - config: | |
| os: ubuntu-20.04 | |
| pkgs: 'libboost-all-dev' | |
| flags: '-DCMAKE_CXX_STANDARD=17' | |
| - config: | |
| os: ubuntu-22.04 | |
| flags: '-DHIGHFIVE_USE_BOOST=Off -DCMAKE_CXX_STANDARD=20' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Setup MPI" | |
| uses: mpi4py/setup-mpi@v1 | |
| with: | |
| mpi: openmpi | |
| - name: "Install libraries" | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get -qq install libhdf5-openmpi-dev libsz2 ninja-build ${{ matrix.config.pkgs }} | |
| - name: Build | |
| run: | | |
| CMAKE_OPTIONS=(-DHIGHFIVE_PARALLEL_HDF5:BOOL=ON ${{ matrix.config.flags }}) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE | |
| # Job testing several versions of hdf5 | |
| # =================================================== | |
| Linux_HDF5_Versions: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| hdf5_version : [ hdf5-1_8_23, hdf5-1_10_11, hdf5-1_12_2, hdf5-1_14_3 ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Install libraries" | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get -qq install ninja-build libsz2 zlib1g-dev libboost-all-dev | |
| - name: Build HDF5 | |
| run: | | |
| wget https://github.com/HDFGroup/hdf5/archive/refs/tags/${{ matrix.hdf5_version }}.tar.gz --output-document hdf5.tar.gz | |
| tar xf hdf5.tar.gz | |
| mkdir -p hdf5-${{ matrix.hdf5_version }}/BUILD && cd hdf5-${{ matrix.hdf5_version }}/BUILD | |
| cmake .. -DCMAKE_BUILD_TYPE=Release -GNinja -DCMAKE_INSTALL_PREFIX=$HOME/${{ matrix.hdf5_version }} -DHDF5_ENABLE_Z_LIB_SUPPORT=ON -DUSE_LIBAEC=ON -DHDF5_BUILD_EXAMPLES=OFF -DBUILD_STATIC_LIBS=OFF -DBUILD_TESTING=OFF | |
| ninja && ninja install | |
| - name: Build | |
| run: | | |
| CMAKE_OPTIONS=( | |
| -GNinja | |
| -DHDF5_ROOT=$HOME/${{ matrix.hdf5_version }} | |
| ) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE | |
| - name: Examples | |
| working-directory: ${{github.workspace}}/build/src/examples | |
| run: $GITHUB_WORKSPACE/.github/run_examples.sh | |
| # Job testing several compilers on a stable Linux | |
| # ==================================================== | |
| Linux_Compilers: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| env: [ | |
| {CC: clang-10, CXX: clang++-10}, | |
| {CC: clang-12, CXX: clang++-12}, | |
| {CC: gcc-9, CXX: g++-9}, | |
| {CC: gcc-10, CXX: g++-10}, | |
| ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Install libraries" | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get -qq install libboost-all-dev libhdf5-dev libsz2 ninja-build | |
| - name: Build | |
| env: ${{matrix.env}} | |
| run: | | |
| CMAKE_OPTIONS=(-GNinja) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE | |
| - name: Examples | |
| working-directory: ${{github.workspace}}/build/src/examples | |
| run: $GITHUB_WORKSPACE/.github/run_examples.sh | |
| # Job running unit-test with sanitizers | |
| # ===================================== | |
| Linux_Sanitizers: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| env: [ | |
| {CC: clang-12, CXX: clang++-12, HIGHFIVE_SANITIZER: address}, | |
| {CC: clang-12, CXX: clang++-12, HIGHFIVE_SANITIZER: undefined}, | |
| {CC: gcc-10, CXX: g++-10, HIGHFIVE_GLIBCXX_ASSERTIONS: On}, | |
| ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Install libraries" | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get -qq install libboost-all-dev libeigen3-dev libhdf5-dev libsz2 ninja-build | |
| - name: Build | |
| env: ${{matrix.env}} | |
| run: | | |
| CMAKE_OPTIONS=( | |
| -GNinja | |
| -DHIGHFIVE_USE_BOOST:BOOL=ON | |
| -DHIGHFIVE_USE_EIGEN:BOOL=ON | |
| -DHIGHFIVE_BUILD_DOCS:BOOL=FALSE | |
| -DHIGHFIVE_GLIBCXX_ASSERTIONS=${HIGHFIVE_GLIBCXX_ASSERTIONS:-OFF} | |
| -DHIGHFIVE_SANITIZER=${HIGHFIVE_SANITIZER:-OFF} | |
| ) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE | |
| - name: Examples | |
| working-directory: ${{github.workspace}}/build/src/examples | |
| run: $GITHUB_WORKSPACE/.github/run_examples.sh | |
| # Job to check using HighFive from other CMake projects | |
| # ===================================================== | |
| CMake_Project: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| parallelism: [ serial, parallel ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Update Ubuntu" | |
| run: | | |
| sudo apt-get -qq update | |
| - name: "Install common libraries" | |
| run: | | |
| sudo apt-get -qq install libboost-all-dev libsz2 ninja-build | |
| - name: "Install serial HDF5" | |
| if: matrix.parallelism == 'serial' | |
| run: | | |
| sudo apt-get -qq install libhdf5-dev | |
| - name: "Install parallel HDF5" | |
| if: matrix.parallelism == 'parallel' | |
| run: | | |
| sudo apt-get -qq install libhdf5-openmpi-dev | |
| - name: "CMake Project Integration" | |
| run: bash tests/test_project_integration.sh | |
| # Job checking the benchmarks work | |
| # ================================ | |
| Benchmarks: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Install libraries" | |
| run: | | |
| sudo apt -y update | |
| sudo apt -y install --no-install-recommends libhdf5-dev pkg-config | |
| - name: "Build benchmarks" | |
| working-directory: ${{github.workspace}}/src/benchmarks | |
| run: make | |
| - run: time ${{github.workspace}}/src/benchmarks/highfive_bench | |
| # Job testing in OSX | |
| # ================== | |
| OSX: | |
| runs-on: ${{matrix.os}} | |
| strategy: | |
| matrix: | |
| os: [ "macOS-12" ] | |
| cxxstd: ["14", "17", "20"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: "Install libraries (OSX)" | |
| run: brew install boost eigen hdf5 ninja xtensor | |
| - name: Build | |
| run: | | |
| CMAKE_OPTIONS=( | |
| -GNinja | |
| -DHIGHFIVE_USE_BOOST:BOOL=ON | |
| -DHIGHFIVE_USE_EIGEN:BOOL=ON | |
| -DHIGHFIVE_USE_XTENSOR:BOOL=ON | |
| -DHIGHFIVE_BUILD_DOCS:BOOL=FALSE | |
| -DHIGHFIVE_TEST_SINGLE_INCLUDES=ON | |
| -DCMAKE_CXX_FLAGS="-coverage -O0" | |
| -DCMAKE_CXX_STANDARD=${{matrix.cxxstd}} | |
| ) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE | |
| - name: Examples | |
| working-directory: ${{github.workspace}}/build/src/examples | |
| run: $GITHUB_WORKSPACE/.github/run_examples.sh | |
| # Job testing in Windows | |
| # ====================== | |
| Windows: | |
| runs-on: ${{matrix.os}} | |
| strategy: | |
| matrix: | |
| os: [ "windows-2022"] | |
| vs-toolset: [ "v141", "v143" ] | |
| cxxstd: ["14", "17", "20"] | |
| include: | |
| - os: "windows-2019" | |
| vs-toolset: "v142" | |
| cxxstd: "14" | |
| - os: "windows-2019" | |
| vs-toolset: "v142" | |
| cxxstd: "17" | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: doc/environment.yaml | |
| environment-name: win-test | |
| - name: Build | |
| shell: bash -l {0} | |
| run: | | |
| CMAKE_OPTIONS=( | |
| -T ${{matrix.vs-toolset}} | |
| -DCMAKE_CXX_STANDARD=${{matrix.cxxstd}} | |
| -DHIGHFIVE_UNIT_TESTS=ON | |
| -DHIGHFIVE_USE_BOOST:BOOL=ON | |
| -DHIGHFIVE_USE_EIGEN:BOOL=ON | |
| -DHIGHFIVE_USE_XTENSOR:BOOL=ON | |
| -DHIGHFIVE_TEST_SINGLE_INCLUDES=ON | |
| ) | |
| source $GITHUB_WORKSPACE/.github/build.sh | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash -l {0} | |
| run: ctest -j2 --output-on-failure -C $BUILD_TYPE |