EnrichmentMap v3.1

EnrichmentMap 3.1

• Redesigned Post-Analysis UI
  • Ability to preview signature gene sets before import
  • Ability to import GMT files from the web (download.baderlab.org)
• New Chart: Color by DataSet.
• Support for g:profiler 2-phenotype analysis.
• Heat Map: Compress expressions by class.
• Export Legend to PDF.
• Export Heat Map to PDF.
• Ability to specify the name of the EnrichmentMap network.
• Drag-and-Drop folders onto the Create EnrichmentMap Dialog.
• Several bug fixes

v3.1.0-RC4

Set version to 3.1.0-RC4

v3.1.0-RC3

Set version to 3.1.0-RC3

v3.1.0-RC2

Set version to 3.1.0-RC2

v3.1.0-RC1

Set version to 3.1 RC1

EnrichmentMap v3.0

EnrichmentMap 3.0 is a major release, with the following new features:

• EnrichmentMap networks can now be created from any number of enrichment data sets (EnrichmentMap 2.0 supported maximum 2 data sets).
• New chart visualizations on nodes for visualizing NES scores, p-values or q-values. Three new charts are available: radial heat-map, linear heat-map and heat-strips.
• New network creation dialog has the ability to scan a folder for files belonging to each dataset. In most cases this removes the need to manually enter the required files.
• New control panel allows the contents and style of the network and charts to be updated dynamically.
• New legend dialog.
• New streamlined HeatMap panel has the ability to summarize expression data.
• Several new commands that allow EnrichmentMap to be automated from external scripts and CyREST.

v3.0.0-RC1

Set version to RC1.

v3.0.0-BETA1

Set version to 3.3.0-BETA1

EnrichmentMap v2.2.1

Bug Fixes

• Fix for bug #173
• Fix for bug #184
• Fix for NPE from HeatMap

v3.0.0-ALPHA1

Alpha test release of EnrichmentMap 3.0.0.