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@uw-loci

UW-Madison LOCI

Laboratory for Optical and Computational Instrumentation: the UW-Madison research lab of Kevin Eliceiri

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  1. curvelets curvelets Public

    Curvelet-Transform based fibrillar collagen quantification (CurveAlign and CT-FIRE)

    MATLAB 21 17

  2. loci-scripts loci-scripts Public

    Scripts and macros for LOCI scientific problems

    Shell

  3. visbio-imagej visbio-imagej Public

    ImageJ plugins for 3D visualization using the VisAD toolkit

    Java 1

  4. misc-plugins misc-plugins Public

    Miscellaneous ImageJ plugins

    Java 2 1

  5. search-image-sc search-image-sc Public

    Image.sc search service

    Python

Repositories

Showing 10 of 95 repositories
  • EBEAM_dashboard Public

    EBEAM System GUI

    uw-loci/EBEAM_dashboard’s past year of commit activity
    Python 2 0 0 2 Updated Sep 19, 2024
  • curvelets Public

    Curvelet-Transform based fibrillar collagen quantification (CurveAlign and CT-FIRE)

    uw-loci/curvelets’s past year of commit activity
    MATLAB 21 17 17 0 Updated Sep 10, 2024
  • he_shg_synth_workflow Public

    Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis

    uw-loci/he_shg_synth_workflow’s past year of commit activity
    Python 9 5 2 1 Updated Jul 26, 2024
  • qp-scope Public

    Controlling a microscope through some sort of python control interface (Pycromanager) and MicroManager

    uw-loci/qp-scope’s past year of commit activity
    Groovy 1 MIT 1 0 0 Updated Jul 23, 2024
  • VTRX_firmware Public
    uw-loci/VTRX_firmware’s past year of commit activity
    C++ 1 0 0 0 Updated Jul 7, 2024
  • spieopticamadison.org Public

    UW SPIE/Optica website

    uw-loci/spieopticamadison.org’s past year of commit activity
    SCSS 0 CC0-1.0 1 3 0 Updated Jun 19, 2024
  • MultivariateAnalysis_FLIM Public

    Determination of Coefficient of Variation in complex FLIM datasets under different imaging conditions

    uw-loci/MultivariateAnalysis_FLIM’s past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated Jun 6, 2024
  • 972b Public

    Arduino library for the 972B Vacuum Pressure Transducer.

    uw-loci/972b’s past year of commit activity
    C++ 1 0 0 0 Updated May 21, 2024
  • basic-stitching Public

    Based on QuPath extension template - for basic tiling with no overlap resolution

    uw-loci/basic-stitching’s past year of commit activity
    Groovy 0 MIT 0 0 0 Updated May 15, 2024
  • collagen-fiber-metrics Public

    Deep generative models for collagen fiber centerline segmentation and extraction in cancer tissue

    uw-loci/collagen-fiber-metrics’s past year of commit activity
    Jupyter Notebook 6 1 0 0 Updated Mar 13, 2024
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