DIMSpec for PFAS_1.0.1.20230615_data_dictionary.json

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'norm_carriers'."},{"cid":1,"table_name":"view_carrier_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"carrier_aliases\" normalized by \"norm_carriers\".","name":"alias","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'alias' from table 'carrier_aliases'."}],"view_carrier_mix":[{"cid":0,"table_name":"view_carrier_mix","table_comment":"View complete mobile phase used in a mixture","name":"mix_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix id"},{"cid":1,"table_name":"view_carrier_mix","table_comment":"View complete mobile phase used in a mixture","name":"component","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier name"},{"cid":2,"table_name":"view_carrier_mix","table_comment":"View complete mobile phase used in a mixture","name":"amount","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier fraction in this mix"},{"cid":3,"table_name":"view_carrier_mix","table_comment":"View complete mobile phase used in a mixture","name":"unit_name","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"full name of carrier amount unit"},{"cid":4,"table_name":"view_carrier_mix","table_comment":"View complete mobile phase used in a mixture","name":"unit","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier unit abbreviation"}],"view_carrier_mix_collection":[{"cid":0,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix collection id"},{"cid":1,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix user-supplied name"},{"cid":2,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"component","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix component name"},{"cid":3,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"component_type","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix component type, whether a carrier or an additive"},{"cid":4,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"amount","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix component amount"},{"cid":5,"table_name":"view_carrier_mix_collection","table_comment":"Tabular view of carrier mix components by mixture ID","name":"unit","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"carrier mix component units associated with the amount"}],"view_carrier_mixes":[{"cid":0,"table_name":"view_carrier_mixes","table_comment":"[autogenerated by sqlite_auto_view()] View of \"carrier_mixes\" normalized by \"norm_carriers\".","name":"mix_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'mix_id' from table 'carrier_mixes'."},{"cid":1,"table_name":"view_carrier_mixes","table_comment":"[autogenerated by sqlite_auto_view()] View of \"carrier_mixes\" normalized by \"norm_carriers\".","name":"component","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_carriers'."},{"cid":2,"table_name":"view_carrier_mixes","table_comment":"[autogenerated by sqlite_auto_view()] View of \"carrier_mixes\" normalized by \"norm_carriers\".","name":"fraction","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'fraction' from table 'carrier_mixes'."}],"view_chromatography_types":[{"cid":0,"table_name":"view_chromatography_types","table_comment":"View all chromatography types in methods","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"mass spec method id"},{"cid":1,"table_name":"view_chromatography_types","table_comment":"View all chromatography types in methods","name":"acronym","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatographic type acronym"},{"cid":2,"table_name":"view_chromatography_types","table_comment":"View all chromatography types in methods","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatographic type used in this method"}],"view_column_chemistries":[{"cid":0,"table_name":"view_column_chemistries","table_comment":"Convenience view to build view_method_as by providing a single character string for column chemistries used in this method","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"ms_descriptions id"},{"cid":1,"table_name":"view_column_chemistries","table_comment":"Convenience view to build view_method_as by providing a single character string for column chemistries used in this method","name":"columns","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"concatenated list of column chemistries used"}],"view_compound_aliases":[{"cid":0,"table_name":"view_compound_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compound_aliases\" normalized by \"norm_analyte_alias_references\".","name":"compound_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'compound_id' from table 'compound_aliases'."},{"cid":1,"table_name":"view_compound_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compound_aliases\" normalized by \"norm_analyte_alias_references\".","name":"alias_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_analyte_alias_references'."},{"cid":2,"table_name":"view_compound_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compound_aliases\" normalized by \"norm_analyte_alias_references\".","name":"alias","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'alias' from table 'compound_aliases'."}],"view_compound_fragments":[{"cid":0,"table_name":"view_compound_fragments","table_comment":"Fragments associated with compounds.","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.id field"},{"cid":1,"table_name":"view_compound_fragments","table_comment":"Fragments associated with compounds.","name":"compound","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.formula field"},{"cid":2,"table_name":"view_compound_fragments","table_comment":"Fragments associated with compounds.","name":"fragments","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"normalized fragments formula field"},{"cid":3,"table_name":"view_compound_fragments","table_comment":"Fragments associated with compounds.","name":"mz","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"annotated fragments mz field"}],"view_compound_fragments_stats":[{"cid":0,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"compound_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.id field"},{"cid":1,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"compound","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.formula field"},{"cid":2,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"fragment","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"normalized fragments formula field"},{"cid":3,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"measured_n_times","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"number of times a given fragment has been reported as measured"},{"cid":4,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"smiles","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"SMILES notation of the fragment"},{"cid":5,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"radical","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"whether ot not this fragment represents a radical"},{"cid":6,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"fixedmass","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"fixed molecular mass of the fragment"},{"cid":7,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"measured_mz_mean","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mean mass to charge value at which the fragment has been measured"},{"cid":8,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"measured_mz_min","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Minimum mass to charge value at which the fragment has been measured"},{"cid":9,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"measured_mz_max","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Maximum mass to charge value at which the fragment has been measured"},{"cid":10,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"measured_mz_stdev","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Sample standard deviation of the mass to charge values at which the fragment has been measured"},{"cid":11,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"ppm_error_mean","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mean part per million error value at which the fragment has been measured"},{"cid":12,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"ppm_error_min","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Minimum part per million error value at which the fragment has been measured"},{"cid":13,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"ppm_error_max","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Maximum part per million error value at which the fragment has been measured"},{"cid":14,"table_name":"view_compound_fragments_stats","table_comment":"Summarization view of statistics associated with compound fragments, including the number of times they have recorded, their measured masses, and ppm error as compared with nominal exact masses.","name":"ppm_error_stdev","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Sample standard deviation of the part per million error values at which the fragment has been measured"}],"view_compounds":[{"cid":0,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'id' from table 'compounds'."},{"cid":1,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"category","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'category' from table 'compounds'."},{"cid":2,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'name' from table 'compounds'."},{"cid":3,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"obtained_from","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'obtained_from' from table 'compounds'."},{"cid":4,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"source_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_source_types'."},{"cid":5,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"additional","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'additional' from table 'compounds'."},{"cid":6,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"local_positive","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'local_positive' from table 'compounds'."},{"cid":7,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"local_negative","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'local_negative' from table 'compounds'."},{"cid":8,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"formula","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'formula' from table 'compounds'."},{"cid":9,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"fixedmass","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'fixedmass' from table 'compounds'."},{"cid":10,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"netcharge","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'netcharge' from table 'compounds'."},{"cid":11,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"inspected_by","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'inspected_by' from table 'compounds'."},{"cid":12,"table_name":"view_compounds","table_comment":"[autogenerated by sqlite_auto_view()] View of \"compounds\" normalized by \"norm_source_types\".","name":"inspected_on","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'inspected_on' from table 'compounds'."}],"view_contributors":[{"cid":0,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"contributor primary key"},{"cid":1,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"name","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"concatenation of contributors.first_name and .last_name fields"},{"cid":2,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"affiliation","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"contributor affiliation"},{"cid":3,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"contact","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"contributor contact information"},{"cid":4,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"pid_url","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"contributors.orcid or affiliations.PID as a hyperlink to their persistent identifier page"},{"cid":5,"table_name":"view_contributors","table_comment":"Readable version of the contributors table that can be expanded with counts of contributions from various places.","name":"samples_contributed","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"number of samples provided by this contributor"}],"view_detectors":[{"cid":0,"table_name":"view_detectors","table_comment":"Convenience view to build view_method_as by providing a single character string for detectors used in this method","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"ms_descriptions id"},{"cid":1,"table_name":"view_detectors","table_comment":"Convenience view to build view_method_as by providing a single character string for detectors used in this method","name":"detectors","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"concatenated list of detectors"}],"view_element_isotopes":[{"cid":0,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"atomic_number","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"elemental atomic number"},{"cid":1,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"symbol","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"periodic table symbol"},{"cid":2,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"isotope","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"\"human readable\" isotopic notation"},{"cid":3,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"element","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"element common name"},{"cid":4,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"exact_mass","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"element nominal exact mass"},{"cid":5,"table_name":"view_element_isotopes","table_comment":"A view of all elemental isotopes and their relative abundances joining reference tables \"elements\" and \"isotopes\".","name":"abundance","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"relative \"natural\" isotopic abundance"}],"view_exact_masses":[{"cid":0,"table_name":"view_exact_masses","table_comment":"Exact monoisotopic masses for elements at their highest abundance","name":"symbol","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"element symbol"},{"cid":1,"table_name":"view_exact_masses","table_comment":"Exact monoisotopic masses for elements at their highest abundance","name":"element","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"element common name"},{"cid":2,"table_name":"view_exact_masses","table_comment":"Exact monoisotopic masses for elements at their highest abundance","name":"exact_mass","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"monisotopic nominal exact mass"}],"view_fragment_aliases":[{"cid":0,"table_name":"view_fragment_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_aliases\" normalized by \"norm_analyte_alias_references\".","name":"fragment_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'fragment_id' from table 'fragment_aliases'."},{"cid":1,"table_name":"view_fragment_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_aliases\" normalized by \"norm_analyte_alias_references\".","name":"alias_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_analyte_alias_references'."},{"cid":2,"table_name":"view_fragment_aliases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_aliases\" normalized by \"norm_analyte_alias_references\".","name":"alias","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'alias' from table 'fragment_aliases'."}],"view_fragment_count":[{"cid":0,"table_name":"view_fragment_count","table_comment":"Number of fragments associated with compounds.","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.name field"},{"cid":1,"table_name":"view_fragment_count","table_comment":"Number of fragments associated with compounds.","name":"formula","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"compounds.formula field"},{"cid":2,"table_name":"view_fragment_count","table_comment":"Number of fragments associated with compounds.","name":"n_fragments","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"distinct number of fragments associated with this compound as the count of associated fragments.formula"}],"view_fragment_mz_stats":[{"cid":0,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"norm_fragment_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized fragment id"},{"cid":1,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"formula","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized fragment formula"},{"cid":2,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"n_annotated","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Number of times this normalized fragment has been measured"},{"cid":3,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"fixedmass","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Monoisotopic fragment mass"},{"cid":4,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"mz_min","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Minimum mass-to-charge ratio at which a given fragment id has been measured."},{"cid":5,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"mz_max","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Maximum mass-to-charge ratio at which a given fragment id has been measured."},{"cid":6,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"mz_mean","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mean mass-to-charge ratio at which a given fragment id has been measured."},{"cid":7,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"ppm_min","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Minimum mass-to-charge ratio at which a given fragment id has been measured."},{"cid":8,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"ppm_max","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Maximum mass-to-charge ratio at which a given fragment id has been measured."},{"cid":9,"table_name":"view_fragment_mz_stats","table_comment":"Mean measures of measured_mz values - a supplementary calculation table.","name":"ppm_error_mean","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mean part per million error of measured fragments compared with idealized fixed mass"}],"view_fragment_sources":[{"cid":0,"table_name":"view_fragment_sources","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_sources\" normalized by \"norm_generation_type\".","name":"annotated_fragments_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'fragment_id' from table 'fragment_sources'."},{"cid":1,"table_name":"view_fragment_sources","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_sources\" normalized by \"norm_generation_type\".","name":"generation_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_generation_type'."},{"cid":2,"table_name":"view_fragment_sources","table_comment":"[autogenerated by sqlite_auto_view()] View of \"fragment_sources\" normalized by \"norm_generation_type\".","name":"citation","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'citation' from table 'fragment_sources'."}],"view_logs":[{"cid":0,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'id' from table 'logs'."},{"cid":1,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"category","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'category' from table 'logs'."},{"cid":2,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"bundle","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'bundle' from table 'logs'."},{"cid":3,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"description","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'description' from table 'logs'."},{"cid":4,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"effect","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_log_effect'."},{"cid":5,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"affects_table","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'affects_table' from table 'logs'."},{"cid":6,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"affects_ids","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'affects_ids' from table 'logs'."},{"cid":7,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"executed_by","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'executed_by' from table 'logs'."},{"cid":8,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"executed_from","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_log_executed_from'."},{"cid":9,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"executed_on","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'executed_on' from table 'logs'."},{"cid":10,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"new_vals","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'new_vals' from table 'logs'."},{"cid":11,"table_name":"view_logs","table_comment":"[autogenerated by sqlite_auto_view()] View of \"logs\" normalized by \"norm_log_effect\" and \"norm_log_executed_from\".","name":"old_vals","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'old_vals' from table 'logs'."}],"view_mass_analyzers":[{"cid":0,"table_name":"view_mass_analyzers","table_comment":"View all mass analyzers used in methods","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"mass spectrometric method id"},{"cid":1,"table_name":"view_mass_analyzers","table_comment":"View all mass analyzers used in methods","name":"acronym","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"mass spectrometer acronym"},{"cid":2,"table_name":"view_mass_analyzers","table_comment":"View all mass analyzers used in methods","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"mass spectrometer type used in this method"}],"view_masserror":[{"cid":0,"table_name":"view_masserror","table_comment":"Get the mass error information for all peaks","name":"peak_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Foreign key to peaks.id"},{"cid":1,"table_name":"view_masserror","table_comment":"Get the mass error information for all peaks","name":"sample_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Foreign key to samples.id"},{"cid":2,"table_name":"view_masserror","table_comment":"Get the mass error information for all peaks","name":"precursor_mz","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Precursor mass of the peak"},{"cid":3,"table_name":"view_masserror","table_comment":"Get the mass error information for all peaks","name":"value","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"msaccuracy value from qc_data"}],"view_method":[{"cid":0,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Method id"},{"cid":1,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"chromatography_system_vendor","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Chromatograhic system vendor"},{"cid":2,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"chromatograph_model","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Chromatographic system model"},{"cid":3,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"chromatographic_type","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Chromatographic separation type name"},{"cid":4,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"mass_spectrometer_vendor","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Vendor name"},{"cid":5,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"mass_spectrometer_model","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mass spectrometer system model"},{"cid":6,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"detector","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mass spectrometer type"},{"cid":7,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"columns","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Chromatographic columns used in this method"},{"cid":8,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"fragmentation_acronym","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mass spectrometer fragmentation type acronym"},{"cid":9,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"fragmentation_name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Mass spectrometer fragmentation type"},{"cid":10,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"polarity","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Polarity setting"},{"cid":11,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"ionization","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Ionization type"},{"cid":12,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"voltage","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Ionization energy"},{"cid":13,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"collision_energy","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Collision energy in electron volts"},{"cid":14,"table_name":"view_method","table_comment":"View mass spectrometer information and method settings","name":"collision_energy_description","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Collision energy description"}],"view_method_narrative":[{"cid":0,"table_name":"view_method_narrative","table_comment":"Collapses the contents of view_method into a single narrative string by ID","name":"Method ID","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"primary key"},{"cid":1,"table_name":"view_method_narrative","table_comment":"Collapses the contents of view_method into a single narrative string by ID","name":"Narrative","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"narrative string collapsed into readable form from view_method"}],"view_mobile_phase_narrative":[{"cid":0,"table_name":"view_mobile_phase_narrative","table_comment":"A print convenience view creating a narrative from the elution profile of each ms_methods_id, with one row for each profile stage.","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"MS Methods ID, foreign key to ms_methods.id"},{"cid":1,"table_name":"view_mobile_phase_narrative","table_comment":"A print convenience view creating a narrative from the elution profile of each ms_methods_id, with one row for each profile stage.","name":"sample_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Sample ID, foreign key to samples.id"},{"cid":2,"table_name":"view_mobile_phase_narrative","table_comment":"A print convenience view creating a narrative from the elution profile of each ms_methods_id, with one row for each profile stage.","name":"peak_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Peak ID, foreign key to peaks.id"},{"cid":3,"table_name":"view_mobile_phase_narrative","table_comment":"A print convenience view creating a narrative from the elution profile of each ms_methods_id, with one row for each profile stage.","name":"narrative","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Summary narrative of this elution profile"}],"view_mobile_phases":[{"cid":0,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'ms_methods_id' from table 'mobile_phases'."},{"cid":1,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"sample_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'sample_id' from table 'mobile_phases'."},{"cid":2,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"peak_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'peak_id' from table 'mobile_phases'."},{"cid":3,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"carrier_mix_collection_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'carrier_mix_collection_id' from table 'mobile_phases'."},{"cid":4,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"flow","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'flow' from table 'mobile_phases'."},{"cid":5,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"flow_units","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_flow_units'."},{"cid":6,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"duration","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'duration' from table 'mobile_phases'."},{"cid":7,"table_name":"view_mobile_phases","table_comment":"[autogenerated by sqlite_auto_view()] View of \"mobile_phases\" normalized by \"norm_flow_units\" and \"norm_duration_units\".","name":"duration_units","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_duration_units'."}],"view_ms_descriptions":[{"cid":0,"table_name":"view_ms_descriptions","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_descriptions\" normalized by \"norm_ms_types\" and \"norm_vendors\".","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'ms_methods_id' from table 'ms_descriptions'."},{"cid":1,"table_name":"view_ms_descriptions","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_descriptions\" normalized by \"norm_ms_types\" and \"norm_vendors\".","name":"ms_types_id","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_ms_types'."},{"cid":2,"table_name":"view_ms_descriptions","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_descriptions\" normalized by \"norm_ms_types\" and \"norm_vendors\".","name":"vendor_id","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_vendors'."},{"cid":3,"table_name":"view_ms_descriptions","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_descriptions\" normalized by \"norm_ms_types\" and \"norm_vendors\".","name":"vendor_model","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'vendor_model' from table 'ms_descriptions'."},{"cid":4,"table_name":"view_ms_descriptions","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_descriptions\" normalized by \"norm_ms_types\" and \"norm_vendors\".","name":"reference","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'reference' from table 'ms_descriptions'."}],"view_ms_methods":[{"cid":0,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'id' from table 'ms_methods'."},{"cid":1,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"ionization","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_ionization'."},{"cid":2,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"voltage","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'voltage' from table 'ms_methods'."},{"cid":3,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"voltage_units","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_voltage_units'."},{"cid":4,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"polarity","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_polarity_types'."},{"cid":5,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"ce_value","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'ce_value' from table 'ms_methods'."},{"cid":6,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"ce_units","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_ce_units'."},{"cid":7,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"ce_desc","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_ce_desc'."},{"cid":8,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"fragmentation","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_fragmentation_types'."},{"cid":9,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"ms2_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_ms_n_types'."},{"cid":10,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"has_qc_method","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'has_qc_method' from table 'ms_methods'."},{"cid":11,"table_name":"view_ms_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"ms_methods\" normalized by \"norm_ionization\", \"norm_voltage_units\", \"norm_polarity_types\", \"norm_ce_units\", \"norm_ce_desc\", \"norm_fragmentation_types\", and \"norm_ms_n_types\".","name":"citation","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'citation' from table 'ms_methods'."}],"view_peaks":[{"cid":0,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'id' from table 'p'."},{"cid":1,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"sample_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'sample_id' from table 'p'."},{"cid":2,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"num_points","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'num_points' from table 'p'."},{"cid":3,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"precursor_mz","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'precursor_mz' from table 'p'."},{"cid":4,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"ion_state","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'nis'."},{"cid":5,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"rt_start","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'rt_start' from table 'p'."},{"cid":6,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"rt_centroid","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'rt_centroid' from table 'p'."},{"cid":7,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"rt_end","type":"REAL","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'rt_end' from table 'p'."},{"cid":8,"table_name":"view_peaks","table_comment":"View of \"peaks\" with text values displayed from normalization tables.","name":"confidence","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Narrative form of confidence from table 'norm_peak_confidence'."}],"view_qc_methods":[{"cid":0,"table_name":"view_qc_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"qc_methods\" normalized by \"norm_qc_methods_name\" and \"norm_qc_methods_reference\".","name":"peak_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'peak_id' from table 'peaks'."},{"cid":1,"table_name":"view_qc_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"qc_methods\" normalized by \"norm_qc_methods_name\" and \"norm_qc_methods_reference\".","name":"name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_qc_methods_name'."},{"cid":2,"table_name":"view_qc_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"qc_methods\" normalized by \"norm_qc_methods_name\" and \"norm_qc_methods_reference\".","name":"value","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'value' from table 'qc_methods'."},{"cid":3,"table_name":"view_qc_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"qc_methods\" normalized by \"norm_qc_methods_name\" and \"norm_qc_methods_reference\".","name":"reference","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_qc_methods_reference'."},{"cid":4,"table_name":"view_qc_methods","table_comment":"[autogenerated by sqlite_auto_view()] View of \"qc_methods\" normalized by \"norm_qc_methods_name\" and \"norm_qc_methods_reference\".","name":"reference_text","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'reference_text' from table 'qc_methods'."}],"view_sample_narrative":[{"cid":0,"table_name":"view_sample_narrative","table_comment":"Collapses the contents of view_samples and view_contributors into a single narrative string by ID","name":"Sample ID","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Sample PK ID"},{"cid":1,"table_name":"view_sample_narrative","table_comment":"Collapses the contents of view_samples and view_contributors into a single narrative string by ID","name":"Narrative","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"narrative string collapsed into readable form from view_samples and view_contributors"}],"view_samples":[{"cid":0,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'id' from table 'samples'."},{"cid":1,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"mzml_name","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'mzml_name' from table 'samples'."},{"cid":2,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"description","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'description' from table 'samples'."},{"cid":3,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"sample_class_id","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'nsc'."},{"cid":4,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"source_citation","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'source_citation' from table 'samples'."},{"cid":5,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"sample_contributor","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'sample_contributor' from table 'samples'."},{"cid":6,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"generation_type","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_generation_type'."},{"cid":7,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"generated_on","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'generated_on' from table 'samples'."},{"cid":8,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Direct use column 'ms_methods_id' from table 'samples'."},{"cid":9,"table_name":"view_samples","table_comment":"View of \"samples\" normalized by \"norm_sample_classes\", \"norm_generation_type\", and \"norm_carriers\".","name":"sample_solvent","type":"TEXT","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"Normalized value column 'name' from table 'norm_carriers'."}],"view_separation_types":[{"cid":0,"table_name":"view_separation_types","table_comment":"Convenience view to build view_method_as by providing a single character string for chromatography type","name":"ms_methods_id","type":"INTEGER","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatography_descriptions id"},{"cid":1,"table_name":"view_separation_types","table_comment":"Convenience view to build view_method_as by providing a single character string for chromatography type","name":"chrom_vendor","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatography system vendor"},{"cid":2,"table_name":"view_separation_types","table_comment":"Convenience view to build view_method_as by providing a single character string for chromatography type","name":"chrom_model","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatography system vendor"},{"cid":3,"table_name":"view_separation_types","table_comment":"Convenience view to build view_method_as by providing a single character string for chromatography type","name":"chrom_type","type":"","notnull":0,"pk":0,"hidden":0,"unique":false,"field_comments":"chromatography type (e.g. LC, GC, etc.)"}]}