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main.tex
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\documentclass[11pt,twoside,openright]{book}
\usepackage[paperwidth=170mm,paperheight=240mm,top=20mm,total={130mm,195mm}]{geometry}
% Reccomendations for thesis printing:
% - Write in (a) A4, (b) 170x240 mm.
% - Minimum margin of 2 cm on top and sides, 2.5 on bottom. Page numbers underneath margin. (Is this for a or b?) latex A4 does well above this automatically.
% - Fontsize: (a) 12, (b) 11
% - Numbering: Bottom centered or side aliged (right align odd, left align even numbers)
% - Chapters, table of contents, foreword etc on odd (right) pages.
% Force bibliography to appear in table of contents
\usepackage[nottoc]{tocbibind}
%For the title page pdf
\usepackage{pdfpages}
% For fancy quote
\usepackage{epigraph}
% Fancy chapter headings
\usepackage{titlesec, color}
\definecolor{gray75}{gray}{0.75}
\newcommand{\hsp}{\hspace{20pt}}
\titleformat{\chapter}[hang]{\Huge\bfseries}{\thechapter\hsp\textcolor{gray75}{|}\hsp}{0pt}{\Huge\bfseries}
% For norwegian characters (fontenc also needed for fancy chapter headings).
\usepackage[utf8]{inputenc}
\usepackage[T1]{fontenc}
\usepackage{comment}
% urls
\usepackage[hidelinks]{hyperref}
% Math
\usepackage{amsmath,bm}
% Subfigures etc
\usepackage{graphicx,subcaption}
\usepackage{dirtytalk}
% Reference management
\newcommand{\Eqref}[1]{Eq.~\eqref{#1}}
\newcommand{\Eqsref}[1]{Eqs.~\eqref{#1}}
\newcommand{\Figref}[1]{Fig.~\ref{#1}}
\newcommand{\Figsref}[1]{Figs.~\ref{#1}}
\newcommand{\Secref}[1]{Sec.~\ref{#1}}
\newcommand{\Chapref}[1]{Chapter~\ref{#1}}
\newcommand{\first}{Paper I}
% Bibliography management
\usepackage[numbers,sort,compress]{natbib}
%\bibliographystyle{apsrev4-1}
\bibliographystyle{unsrtnat}
\begin{document}
\frontmatter
\includepdf{figures/PHD_first_page.pdf}
% To ensure: titlepage-blank-epigraph-blank-preface, with preface the first numbered page.
% We start counting from the first page, wiich is the epigraph.
\newpage\null\thispagestyle{empty}\newpage
\setcounter{page}{1}\thispagestyle{empty}\newpage
%\newpage\null\thispagestyle{empty}\newpage
\section*{Abstract}
\input{abstract.tex}
\newpage\null\newpage
\section*{Acknowledgements}
\input{acknowledgement.tex}
\newpage\null\newpage
\tableofcontents
\mainmatter
% Chapter: First chapter
\chapter{Fluctuations in magnetized plasmas}
\input{first_chapter.tex}
% Chapter: Second chapter
\chapter{Reduced fluid models for SOL plasmas}
\input{second_chapter.tex}
\chapter{Stochastic modeling}
\input{third_chapter.tex}
\chapter{Summary of Papers}\label{ch:sum-paper}
\input{summary_of_papers.tex}
%\section{List of other works}
%{\bf Unpublished manuscripts}\\
%{\bf Oral Conference Presentations}\\
\chapter{Conclusion and future work}\label{ch:conclusion}
\input{conclusion.tex}
\backmatter
\bibliography{sources}
%\begin{comment}
% Page break in TOC
\addtocontents{toc}{\protect\newpage}
\chapter{Paper I: \\ Intermittent fluctuations due to Lorentzian pulses in turbulent thermal convection}
\chaptermark{Paper I}
G. Decristoforo, A. Theodorsen and O. E. Garcia,\\
Physics of Fluids {\bf 32}, 085102 (2020),\\
doi:\href{https://doi.org/10.1063/5.0012017}{10.1063/5.0012017}
\newpage\null\newpage
\includepdf[pages=-]{papers/Intermittent_fluctuations.pdf}
\chapter{Paper II: \\ Dirac comb and exponential frequency spectra in chaotic dynamics}
\chaptermark{Paper II}
A. Theodorsen, G. Decristoforo and O. E. Garcia,\\
To be submitted to Chaos: An Interdisciplinary Journal of Nonlinear Science
\newpage\null\newpage
\includepdf[pages=-]{papers/Dirac_comb.pdf}
\chapter{Paper III: \\ Numerical turbulence simulations of intermittent fluctuations in the scrape-off layer of magnetized plasmas}
\chaptermark{Paper III}
G. Decristoforo, A. Theodorsen, J. Omotani, T. Nicholas, and O. E. Garcia,\\
Submitted to Physics of Plasmas on 15.2.2021,\\
Available online: \href{https://arxiv.org/abs/2102.04723}{arXiv:2102.04723 [physics.plasm-ph]}
\newpage\null\newpage
\includepdf[pages=-]{papers/Numerical_turbulence.pdf}
\chapter{Paper IV: \\ Blob interactions in 2D scrape-off layer simulations}
\chaptermark{Paper IV}
G. Decristoforo, F. Militello, T. Nicholas, J. Omotani, C. Marsden, N. Walkden and O. E. Garcia,\\
Physics of Plasmas {\bf 27}, 122301 (2020),\\
doi:\href{https://doi.org/10.1063/5.0021314}{10.1063/5.0021314}
\newpage\null\newpage
\includepdf[pages=-]{papers/Blob_interactions.pdf}
%\end{comment}
\end{document}