The CLEAN R package contains functions to compute the R functions to perform the Clustering Enrichment Analysis.
Installation:
#In order to avoid unnecessary warnings, check for installation of devtools (>= 1.12.0):
packageVersion("devtools")
[1] ‘1.12.0’
#Companion data packages
devtools::install_github("uc-bd2k/CLEAN.Hs")
devtools::install_github("uc-bd2k/CLEAN.Mm")
devtools::install_github("uc-bd2k/CLEAN.Rn")
#Main package
devtools::install_github("uc-bd2k/CLEAN")