From fcfbf27737b873d9d79f1c56c448bdf880c0a625 Mon Sep 17 00:00:00 2001 From: MilagrosMarin Date: Tue, 14 May 2024 06:44:08 +0200 Subject: [PATCH 1/2] update ephys_organoids --- element_array_ephys/ephys_organoids.py | 9 +++------ 1 file changed, 3 insertions(+), 6 deletions(-) diff --git a/element_array_ephys/ephys_organoids.py b/element_array_ephys/ephys_organoids.py index 2f877706..f97a9c54 100644 --- a/element_array_ephys/ephys_organoids.py +++ b/element_array_ephys/ephys_organoids.py @@ -758,9 +758,7 @@ def make(self, key): # Filter for used electrodes. If probe_info["used_electrodes"] is None, it means all electrodes were used. number_of_electrodes = len(electrode_query) probe_info["used_electrodes"] = ( - probe_info["used_electrodes"] - if probe_info["used_electrodes"] is not None - else list(range(number_of_electrodes)) + probe_info["used_electrodes"] if probe_info["used_electrodes"] is not None else list(range(number_of_electrodes)) ) electrode_query &= ( f"electrode IN {tuple(probe_info['used_electrodes'])}" @@ -914,9 +912,8 @@ def make(self, key): # Filter for used electrodes. If probe_info["used_electrodes"] is None, it means all electrodes were used. number_of_electrodes = len(electrode_query) probe_info["used_electrodes"] = ( - probe_info["used_electrodes"] - if probe_info["used_electrodes"] is not None - else list(range(number_of_electrodes)) + probe_info["used_electrodes"] if probe_info["used_electrodes"] is not None else list(range(number_of_electrodes)) + ) electrode_query &= ( f"electrode IN {tuple(probe_info['used_electrodes'])}" ) From cebd2c1f6b53cb85a3d5e229582234b064689fa3 Mon Sep 17 00:00:00 2001 From: MilagrosMarin Date: Wed, 15 May 2024 14:06:45 +0200 Subject: [PATCH 2/2] black formatting --- element_array_ephys/ephys_organoids.py | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/element_array_ephys/ephys_organoids.py b/element_array_ephys/ephys_organoids.py index f97a9c54..fa9cc848 100644 --- a/element_array_ephys/ephys_organoids.py +++ b/element_array_ephys/ephys_organoids.py @@ -758,11 +758,11 @@ def make(self, key): # Filter for used electrodes. If probe_info["used_electrodes"] is None, it means all electrodes were used. number_of_electrodes = len(electrode_query) probe_info["used_electrodes"] = ( - probe_info["used_electrodes"] if probe_info["used_electrodes"] is not None else list(range(number_of_electrodes)) - ) - electrode_query &= ( - f"electrode IN {tuple(probe_info['used_electrodes'])}" + probe_info["used_electrodes"] + if probe_info["used_electrodes"] is not None + else list(range(number_of_electrodes)) ) + electrode_query &= f"electrode IN {tuple(probe_info['used_electrodes'])}" channel2electrode_map = electrode_query.fetch(as_dict=True) channel2electrode_map: dict[int, dict] = { chn.pop("channel_idx"): chn for chn in channel2electrode_map @@ -912,11 +912,11 @@ def make(self, key): # Filter for used electrodes. If probe_info["used_electrodes"] is None, it means all electrodes were used. number_of_electrodes = len(electrode_query) probe_info["used_electrodes"] = ( - probe_info["used_electrodes"] if probe_info["used_electrodes"] is not None else list(range(number_of_electrodes)) - ) - electrode_query &= ( - f"electrode IN {tuple(probe_info['used_electrodes'])}" + probe_info["used_electrodes"] + if probe_info["used_electrodes"] is not None + else list(range(number_of_electrodes)) ) + electrode_query &= f"electrode IN {tuple(probe_info['used_electrodes'])}" channel2electrode_map = electrode_query.fetch(as_dict=True) channel2electrode_map: dict[int, dict] = { chn.pop("channel_idx"): chn for chn in channel2electrode_map