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  1. GeodisTK GeodisTK Public

    geodesic distance transform of 2d/3d images

    C++ 132 35

  2. brats17 brats17 Public

    Brain tumor segmentation for MICCAI 2017 BraTS challenge

    Python 324 130

  3. HiLab-git/SimpleCRF HiLab-git/SimpleCRF Public

    matlab and python wrap of crf and dense crf, both 2d and 3d are supported

    C++ 164 35

  4. NifTK/NiftyNet NifTK/NiftyNet Public archive

    [unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

    Python 1.4k 406

  5. HiLab-git/PyMIC HiLab-git/PyMIC Public

    Python 347 53

  6. HiLab-git/COPLE-Net HiLab-git/COPLE-Net Public

    COVID-19 Pneumonia Lesion segmentation network

    Python 87 16