From a21b558f696423b0455589be3546a64884d0503b Mon Sep 17 00:00:00 2001 From: ctbus Date: Tue, 16 May 2023 14:09:06 -0400 Subject: [PATCH] Working tests --- .tests/e2e/test_full_run.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.tests/e2e/test_full_run.py b/.tests/e2e/test_full_run.py index ddb8476..6c716a9 100755 --- a/.tests/e2e/test_full_run.py +++ b/.tests/e2e/test_full_run.py @@ -99,7 +99,7 @@ def test_full_run(run_sunbeam): lines = f.readlines() print(lines) assert ( - any(["2\t200.0\tk__Bacteria; p__; c__; o__; f__; g__; s__" in x.strip() for x in lines]) + any(["2\t0.0\t200.0\tk__Bacteria; p__; c__; o__; f__; g__; s__" in x.strip() for x in lines]) ) with open(os.path.join(output_fp, "logs/kraken2_classify_report_EMPTY.log")) as f: