From 2134cd7b7b3f57eba03891dd8a5b2ce450c59cdf Mon Sep 17 00:00:00 2001
From: Kyle Bittinger <kylebittinger@gmail.com>
Date: Fri, 1 Dec 2023 15:15:33 -0500
Subject: [PATCH] Add pip and git to conda environment

---
 sbx_kraken_env.yml | 20 +++++++++++---------
 1 file changed, 11 insertions(+), 9 deletions(-)

diff --git a/sbx_kraken_env.yml b/sbx_kraken_env.yml
index b53df82..79fb5fd 100755
--- a/sbx_kraken_env.yml
+++ b/sbx_kraken_env.yml
@@ -1,9 +1,11 @@
-name: sbx_kraken
-channels:
-  - bioconda
-dependencies:
-  - biom-format
-  - kraken2
-  - python>=3
-  - pip:
-    - git+http://github.com/smdabdoub/kraken-biom.git
\ No newline at end of file
+name: sbx_kraken
+channels:
+  - bioconda
+dependencies:
+  - biom-format
+  - kraken2
+  - python>=3
+  - pip
+  - git
+  - pip:
+    - git+http://github.com/smdabdoub/kraken-biom.git