NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(plot,diffnet)
S3method(plot,microNetProps)
S3method(print,GCD)
S3method(print,summary.microNetComp)
S3method(print,summary.microNetProps)
S3method(summary,microNetComp)
S3method(summary,microNetProps)
export(calcGCD)
export(calcGCM)
export(cclasso)
export(colToTransp)
export(createAssoPerm)
export(diffnet)
export(editLabels)
export(gcoda)
export(installNetCoMiPacks)
export(multAdjust)
export(netAnalyze)
export(netCompare)
export(netConstruct)
export(plotHeat)
export(renameTaxa)
export(testGCM)
import(Matrix)
import(doSNOW)
import(filematrix)
import(foreach)
import(igraph)
import(mixedCCA)
import(phyloseq)
importFrom(Biobase,ExpressionSet)
importFrom(MASS,fitdistr)
importFrom(Matrix,colSums)
importFrom(Matrix,nearPD)
importFrom(Matrix,rowSums)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rdpack,reprompt)
importFrom(SPRING,SPRING)
importFrom(SPRING,mclr)
importFrom(SpiecEasi,getOptBeta)
importFrom(SpiecEasi,getOptCov)
importFrom(SpiecEasi,getRefit)
importFrom(SpiecEasi,sparcc)
importFrom(SpiecEasi,sparseiCov)
importFrom(SpiecEasi,spiec.easi)
importFrom(SpiecEasi,symBeta)
importFrom(WGCNA,TOMdist)
importFrom(WGCNA,bicor)
importFrom(WGCNA,labels2colors)
importFrom(WGCNA,pickSoftThreshold)
importFrom(WGCNA,randIndex)
importFrom(corrplot,corrplot)
importFrom(fdrtool,fdrtool)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(graphics,layout)
importFrom(graphics,par)
importFrom(graphics,rect)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(igraph,decompose.graph)
importFrom(igraph,graph_from_adjacency_matrix)
importFrom(orca,count4)
importFrom(phyloseq,tax_table)
importFrom(pulsar,natural.connectivity)
importFrom(qgraph,qgraph)
importFrom(rlang,as_function)
importFrom(stats,as.dist)
importFrom(stats,complete.cases)
importFrom(stats,cor)
importFrom(stats,cutree)
importFrom(stats,hclust)
importFrom(stats,p.adjust)
importFrom(stats,p.adjust.methods)
importFrom(stats,pnorm)
importFrom(stats,pt)
importFrom(stats,qlnorm)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(utils,capture.output)
importFrom(utils,install.packages)
importFrom(utils,installed.packages)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)
importFrom(vegan,rrarefy)
importFrom(vegan,vegdist)