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Libcrypto.so.1.1 not available? #85
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We have seen this ourselves, this was down to an undocumented implicit dependency in an upstream package that can mess up linking of curl. We fixed this for newer versions of the respective bioconda packages, but the changes pulling this into this workflow are still unmerged (and thus unreleased). They are in pull request #77. As a dirty fix to get past this, you could change the
However, this will stop working once we merge the pull request. So you will then have to switch back to the latest release. I'll try to remember to ping you here, once this is merged and released. |
ok. got it. will try and report back. |
I made changes to the Snakefiles as you suggested. This time I have following error.
This While
Since there is a message with
Is there something wrong? |
There's nothing obviously sticking out for me. But are you sure that your sample sheet is called Also, a Also, the column names And finally, just look at input and output files of the rule that is failing and those that come before it. Maybe you can spot what and where it goes wrong. |
I hope this is resolved for you, so I am closing it for now. If you run into further problems, please feel free to open new issues for those. |
I am seeing an error while running kallisto sleuth pipline.
When I looked at the log files.
Do I need to install some other library?
Thank you.
Following is the output of snakemake/log/2023-12-18T142901.516512.snakemake.log
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