From 5bf0c528e7e4cf1687ba72b95a547ad16a33130e Mon Sep 17 00:00:00 2001
From: David Laehnemann <david.laehnemann@hhu.de>
Date: Tue, 31 Oct 2023 22:16:40 +0100
Subject: [PATCH] dirty fix, until newest bioconductor release becomes
 available on bioconda

---
 workflow/envs/biomart.yaml | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/workflow/envs/biomart.yaml b/workflow/envs/biomart.yaml
index 85a86d4e..8ff9a136 100644
--- a/workflow/envs/biomart.yaml
+++ b/workflow/envs/biomart.yaml
@@ -3,4 +3,8 @@ channels:
   - bioconda
 dependencies:
   - bioconductor-biomart =2.56
-  - r-tidyverse =2.0
\ No newline at end of file
+  - r-tidyverse =2.0
+  # remove once we can update to bioconductor-biomart of the 3.18 release, which will
+  # include this proper fix for the underlying compatibility issue:
+  # https://github.com/Bioconductor/BiocFileCache/pull/50
+  - r-dbplyr=2.3.4