From 38fe6d2568fc12dbba9de3855911aad60e265e3f Mon Sep 17 00:00:00 2001 From: David Laehnemann Date: Tue, 15 Aug 2023 10:29:10 +0200 Subject: [PATCH] unpin snakemake github action to use newest, update super linter action to v5 --- .github/workflows/main.yml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 7dbfb270..18f524e7 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -43,7 +43,7 @@ jobs: steps: - uses: actions/checkout@v1 - name: Formatting - uses: github/super-linter@v4 + uses: github/super-linter@v5 env: VALIDATE_ALL_CODEBASE: false DEFAULT_BRANCH: main @@ -54,7 +54,7 @@ jobs: steps: - uses: actions/checkout@v1 - name: Linting - uses: snakemake/snakemake-github-action@v1.22.0 + uses: snakemake/snakemake-github-action@v1 with: directory: .test snakefile: workflow/Snakefile @@ -73,7 +73,7 @@ jobs: submodules: recursive - name: Test workflow - uses: snakemake/snakemake-github-action@v1.23.0 + uses: snakemake/snakemake-github-action@v1 with: directory: .test snakefile: workflow/Snakefile @@ -92,7 +92,7 @@ jobs: submodules: recursive - name: Test 3-prime-workflow - uses: snakemake/snakemake-github-action@v1.23.0 + uses: snakemake/snakemake-github-action@v1 with: directory: .test/3-prime-config snakefile: workflow/Snakefile @@ -101,7 +101,7 @@ jobs: # TODO: add some kind of test mode to report generation which does not really try to include # results. # - name: Test report - # uses: snakemake/snakemake-github-action@v1.22.0 + # uses: snakemake/snakemake-github-action@v1 # with: # directory: .test # snakefile: workflow/Snakefile