Update _datasets.py #649
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Update _datasets.py #649
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Update sciplex3 and shifrutmarson to pointers to new scperturb version (1.4), which fixes processing errors in the old versions
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should probably note: latest scperturb version also fixes an issue with Dixit, and that's now separated into three separate datasets on our end. I think the one currently linked should map to https://zenodo.org/records/13350497/files/DixitRegev2016_K562_TFs_High_MOI.h5ad but wasn't 100% sure and didn't want to risk breaking anything. |
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #649 +/- ##
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Coverage 66.40% 66.40%
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Files 46 46
Lines 5963 5963
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Hits 3960 3960
Misses 2003 2003
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Thank you! |
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Update sciplex3 and shifrutmarson to pointers to new scperturb version (1.4), which fixes processing errors in the old versions on scPerturb. The only change is swapping the Zenodo accession numbers for those two files.