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install.packages('terra', repos='https://rspatial.r-universe.dev')
Installing package into ‘/data/lmx/R/x86_64-conda-linux-gnu-library/4.4’
(as ‘lib’ is unspecified)
trying URL 'https://rspatial.r-universe.dev/src/contrib/terra_1.8-0.tar.gz'
Content type 'application/gzip' length 2051555 bytes (2.0 MB)
==================================================
downloaded 2.0 MB
installing source package ‘terra’ ...
** using staged installation
configure: CC: x86_64-conda-linux-gnu-cc
configure: CXX: x86_64-conda-linux-gnu-c++ -std=gnu++17
checking for gdal-config... /data/lmx/.conda/envs/Rlmx/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 3.9.3
checking GDAL version >= 2.0.1... yes
checking for gcc... x86_64-conda-linux-gnu-cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether x86_64-conda-linux-gnu-cc accepts -g... yes
checking for x86_64-conda-linux-gnu-cc option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for gdal.h... yes
checking GDAL: linking with --libs only... no
checking GDAL: linking with --libs and --dep-libs... no
/data/lmx/.conda/envs/Rlmx/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /data/lmx/.conda/envs/Rlmx/lib/libgdal.so: undefined reference to sqlite3_total_changes64' collect2: error: ld returned 1 exit status /data/lmx/.conda/envs/Rlmx/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /data/lmx/.conda/envs/Rlmx/lib/libgdal.so: undefined reference to sqlite3_total_changes64'
collect2: error: ld returned 1 exit status
configure: Install failure: compilation and/or linkage problems.
configure: error: GDALAllRegister not found in libgdal.
ERROR: configuration failed for package ‘terra’
The downloaded source packages are in
‘/tmp/RtmpvQYvt2/downloaded_packages’
Warning message:
In install.packages("terra", repos = "https://rspatial.r-universe.dev") :
installation of package ‘terra’ had non-zero exit status
The text was updated successfully, but these errors were encountered:
** using staged installation
configure: CC: x86_64-conda-linux-gnu-cc
configure: CXX: x86_64-conda-linux-gnu-c++ -std=gnu++17
checking for gdal-config... /data/lmx/.conda/envs/Rlmx/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 3.9.3
checking GDAL version >= 2.0.1... yes
checking for gcc... x86_64-conda-linux-gnu-cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether x86_64-conda-linux-gnu-cc accepts -g... yes
checking for x86_64-conda-linux-gnu-cc option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for gdal.h... yes
checking GDAL: linking with --libs only... no
checking GDAL: linking with --libs and --dep-libs... no
/data/lmx/.conda/envs/Rlmx/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /data/lmx/.conda/envs/Rlmx/lib/libgdal.so: undefined reference to
sqlite3_total_changes64' collect2: error: ld returned 1 exit status /data/lmx/.conda/envs/Rlmx/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: /data/lmx/.conda/envs/Rlmx/lib/libgdal.so: undefined reference to
sqlite3_total_changes64'collect2: error: ld returned 1 exit status
configure: Install failure: compilation and/or linkage problems.
configure: error: GDALAllRegister not found in libgdal.
ERROR: configuration failed for package ‘terra’
The downloaded source packages are in
‘/tmp/RtmpvQYvt2/downloaded_packages’
Warning message:
In install.packages("terra", repos = "https://rspatial.r-universe.dev") :
installation of package ‘terra’ had non-zero exit status
The text was updated successfully, but these errors were encountered: