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Quadram Institute Bioscience

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  1. socru socru Public

    Order and orientation of complete bacterial genomes

    Python 27 6

  2. dadaist2 dadaist2 Public

    Dadaist2 🟨 Highway to R

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  3. albatradis albatradis Public

    Comparative TraDIS analysis

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  4. phage-annotation-workshop phage-annotation-workshop Public

    Phage Annotation Workshop 2021

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    Run virfinder in parallel

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  6. scagaire scagaire Public

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Repositories

Showing 10 of 94 repositories
  • st_illumina_sample_sheet_validator Public

    Sample sheet validator for demultiplexing Illumina runs

    quadram-institute-bioscience/st_illumina_sample_sheet_validator’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Nov 7, 2024
  • sample_sheet_validator Public Forked from thanhleviet/sample_sheet_validator

    Python script validates the contents of a Nextseq 2k sample sheet, ensuring that it meets the expected format

    quadram-institute-bioscience/sample_sheet_validator’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Nov 7, 2024
  • qib-irida-uploader Public

    A wrapper of iridauploader for creating project and uploading samples to QIB IRIDA

    quadram-institute-bioscience/qib-irida-uploader’s past year of commit activity
    Python 0 1 0 0 Updated Oct 25, 2024
  • ebame-viromics Public Forked from p2pu/course-in-a-box

    Ebame workshop website, built by P2PU

    quadram-institute-bioscience/ebame-viromics’s past year of commit activity
    SCSS 0 MIT 499 0 0 Updated Oct 20, 2024
  • phylobarcode Public

    <pilot> in-silico amplicons optimised for phylogenetic signal

    quadram-institute-bioscience/phylobarcode’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 18, 2024
  • mg-tk Public Forked from hildebra/mg-tk

    metagenomic toolkit - end-to-end solution for analysing metagenomes

    quadram-institute-bioscience/mg-tk’s past year of commit activity
    Perl 1 GPL-2.0 1 0 0 Updated Oct 9, 2024
  • QuaTradis Public

    A pipeline to analyse transposon directed insertion-site sequencing

    quadram-institute-bioscience/QuaTradis’s past year of commit activity
    Gnuplot 3 GPL-3.0 0 2 0 Updated Sep 28, 2024
  • n50 Public

    Calculate N50 from FASTA and FASTX files

    quadram-institute-bioscience/n50’s past year of commit activity
    C 0 MIT 0 0 0 Updated Sep 25, 2024
  • NBI-Slurm Public

    Experimental interface to slurm

    quadram-institute-bioscience/NBI-Slurm’s past year of commit activity
    Perl 1 0 0 0 Updated Sep 25, 2024
  • uvaia Public

    Reference-based alignment and sequence database search of SARS-CoV-2 genomes.

    quadram-institute-bioscience/uvaia’s past year of commit activity
    C 4 GPL-3.0 0 0 0 Updated Sep 2, 2024
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