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ci-tests.yaml
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name: CI
on:
push:
branches:
- master
pull_request:
branches:
- master
jobs:
test:
name: "Tests Core"
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"]
python-version: ["3.9", "3.12"]
pytest_opts: ["--workers 4 --tests-per-worker 1"]
steps:
- name: Checkout source
uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- uses: prefix-dev/[email protected]
with:
pixi-version: v0.29.0
cache: true
- name: set numba parallel flags
run: |
echo "NUMBA_NUM_THREADS=1" >> $GITHUB_ENV
- name: Setup r2u
uses: eddelbuettel/github-actions/r2u-setup@master
- name: Print R version
run: |
Rscript -e 'R.version'
- name: Install R packages
run: |
R_LIB_PATH="${{ github.workspace }}/.pixi/envs/dev/lib/R/library"
mkdir -p $R_LIB_PATH
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages(c('fixest', 'broom', 'did2s', 'wildrwolf', 'ivDiag', 'car'), lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library')"
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages('ritest', lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://grantmcdermott.r-universe.dev'))"
- name: Run 'regular 'tests
run: |
pixi run tests-regular
- name: Upload to Codecov
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
partial: true
flags: core-tests
test_slow:
name: "Tests vs fixest"
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"]
python-version: ["3.9", "3.12"]
pytest_opts: ["--workers 4 --tests-per-worker 1"]
steps:
- name: Checkout source
uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- uses: prefix-dev/[email protected]
with:
pixi-version: v0.29.0
cache: true
- name: set numba parallel flags
run: |
echo "NUMBA_NUM_THREADS=1" >> $GITHUB_ENV
- name: Setup r2u
uses: eddelbuettel/github-actions/r2u-setup@master
- name: Install R packages
run: |
R_LIB_PATH="${{ github.workspace }}/.pixi/envs/dev/lib/R/library"
mkdir -p $R_LIB_PATH
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages(c('fixest', 'broom','did2s', 'wildrwolf', 'ivDiag', 'car'), lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library')"
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages('ritest', lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://grantmcdermott.r-universe.dev'))"
- name: Run 'slow 'tests
run: |
pixi run tests-slow
#- name: Upload to Codecov
# uses: codecov/codecov-action@v4
# with:
# token: ${{ secrets.CODECOV_TOKEN }}
# partial: true
# flags: tests-vs-fixest
build-docs:
name: "Build Docs"
runs-on: ubuntu-latest
needs: ["test"]
steps:
- name: Checkout source
uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: "3.11"
- uses: prefix-dev/[email protected]
with:
pixi-version: v0.29.0
cache: true
- name: Set up Quarto
uses: quarto-dev/quarto-actions/setup@v2
- name: install tinytex
run: |
quarto install tinytex
- name: Compile docstrings with quartodoc
run: |
pixi run docs-build
- name: Render docs
run: |
pixi run docs-render
- name: Save docs artifact
uses: actions/upload-artifact@v4
with:
name: docs-html
path: docs/_site
publish-docs:
name: "Publish Docs"
runs-on: ubuntu-latest
permissions:
contents: write
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
needs: ["build-docs", "test"]
if: github.ref == 'refs/heads/master'
steps:
- name: Download docs artifact
uses: actions/download-artifact@v4
with:
name: docs-html
path: docs/_site
- name: Publish docs to GitHub Pages
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: docs/_site