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fix: indexing of operations which are $refs #339

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@mfbx9da4 mfbx9da4 commented Oct 18, 2024

Why
We have a linting rule which checks for duplicate operation IDs / duplicate operations. This linting rule wasn't catching duplicates if the operations were living in an external $ref.

What
Currently when building the index of operations we weren't checking for refs, this PR changes that.

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