Name		Name	Last commit message	Last commit date
Latest commit History 33 Commits
PhaME.pm		PhaME.pm
README.md		README.md
SNP_INDEL_count.pl		SNP_INDEL_count.pl
blast2sam.pl		blast2sam.pl
bowtie2sam.pl		bowtie2sam.pl
buildSNPDB.pl		buildSNPDB.pl
catAlign.pl		catAlign.pl
checkNUCmer.pl		checkNUCmer.pl
extractGenes.pl		extractGenes.pl
fastq_utility.pm		fastq_utility.pm
get_repeat_coords.pl		get_repeat_coords.pl
pal2nal.pl		pal2nal.pl
parallel_run.pl		parallel_run.pl
parseGapsNUCmer.pl		parseGapsNUCmer.pl
phame.ctl		phame.ctl
removeGaps.pl		removeGaps.pl
removeRepeats.pl		removeRepeats.pl
runContigNUCmer.pl		runContigNUCmer.pl
runHyPhy.pl		runHyPhy.pl
runNUCmer.pl		runNUCmer.pl
runPhaME.pl		runPhaME.pl
runReadsMapping.pl		runReadsMapping.pl
runReadsToGenome.pl		runReadsToGenome.pl
samtools.pl		samtools.pl
translate.pl		translate.pl

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Phylogenetic and Molecular Evolution (PhaME) analysis tool

SYSTEM REQUIREMENT

QUICK START

DETAIL INSTRUCTIONS

Obtaining PhaME

Installation

Running PhaME

CITATION

AUTHORS

ACKNOWLEDGEMENTS

CHANGE LOG

Version 1.0b:

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