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    21 repositories

    • timagetk

      Public
      3D and 2D Image processing algorithms in Python for tissues
      trackingimage-processingregistrationsegmentation
      C
      •
      Other
      •5•13•13•0•Updated Sep 4, 2024Sep 4, 2024

    • AML

      Public
      AML: The AMAPmod language for plant architecture analysis
      C++
      •1•1•0•0•Updated Oct 3, 2023Oct 3, 2023

    • tissuelab

      Public
      A multi-platform, plugin-based platform dedicated to the interactive visualization and complex processing of plant tissues
      Python
      •1•2•5•0•Updated Sep 14, 2018Sep 14, 2018

    • lpy

      Public
      An open source python version of the Lindenmayer Systems.
      C++
      •
      Other
      •27•1•2•1•Updated Aug 1, 2018Aug 1, 2018

    • draco_stem

      Public
      OpenAlea library for the reconstruction of 3D meshes from segmented shoot apical meristem (SAM) tissue images : Dual Reconstruction by Adjacency Complex Optimization (DRACO) and SAM Tissue Enhanced Mesh (STEM)
      Python
      •
      Other
      •3•5•0•0•Updated Jun 13, 2018Jun 13, 2018

    • cellcomplex

      Public
      OpenAlea library implementing data structures and algorithms for the representation and manipulation of cellular complexes.
      Python
      •
      Other
      •1•2•2•0•Updated Jun 12, 2018Jun 12, 2018

    • tissue_analysis

      Public
      An OpenAlea library providing image analysis tools to extract quantitative information from 3D segmented tissue images
      Python
      •
      Other
      •1•4•1•0•Updated Feb 14, 2018Feb 14, 2018

    • Lpy-Unity

      Public
      0•0•0•0•Updated Jan 25, 2018Jan 25, 2018

    • openalea-components

      Public
      Openalea components
      Python
      •7•1•2•0•Updated Oct 5, 2017Oct 5, 2017

    • segmentation_evaluation

      Public
      Python
      •
      Other
      •0•1•0•0•Updated Jul 20, 2017Jul 20, 2017

    • tissuelab-conda-recipes

      Public
      Shell
      •
      MIT License
      •1•0•1•0•Updated May 12, 2017May 12, 2017

    • openalea

      Public
      Temporary repository used to merge openalea/core openalea/oalab openalea/vplt. Once merged, move it to openalea/openalea
      Python
      •0•3•0•0•Updated May 10, 2017May 10, 2017

    • openalea-recipes

      Public
      Conda recipes for OpenAlea
      Python
      •6•0•0•0•Updated Apr 26, 2017Apr 26, 2017

    • VirtualPlants-website

      Public
      Sphinx sources for VirtualPlants website
      Jupyter Notebook
      •2•0•0•0•Updated Feb 1, 2017Feb 1, 2017

    • mtg

      Public
      The Mutliscale Tree Graph datastructure
      Python
      •
      Other
      •0•0•0•0•Updated Nov 29, 2016Nov 29, 2016

    • plantlab

      Public
      OpenAleaLab extension "plant"
      Python
      •
      Other
      •3•0•0•0•Updated Nov 22, 2016Nov 22, 2016

    • flowerdemo

      Public
      Demo to manipulate flowers architecture and genes.
      Python
      •
      Other
      •0•0•0•0•Updated Nov 16, 2016Nov 16, 2016

    • dag

      Public
      Formalisation of DAG usage for plant modelling
      Python
      •
      Other
      •0•0•0•0•Updated Nov 10, 2016Nov 10, 2016

    • cgal_meshing

      Public
      Generate coarse meshes of cell tissue from 3D segmented images using the CGAL library.
      Python
      •
      Other
      •1•0•0•0•Updated Jul 4, 2016Jul 4, 2016

    • VirtualPlants.github.io

      Public
      VirtualPlants Website
      HTML
      •0•0•0•0•Updated Dec 9, 2015Dec 9, 2015

    • RSML-conversion-tools

      Public
      Conversion tools for RSML
      Java
      •6•0•0•0•Updated Mar 29, 2015Mar 29, 2015