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medLLMbenchmark
PublicVoltRon
PublicImageArray
PublicCompassDock
PublicOfficial Implementation of CompassDockflexynesis
Publicpigx_rnaseq
PublicZarrArray
Publicmergenstudio
Publicpigx_bsseq
Publicbisulfite sequencing pipeline from fastq to methylation reportsmergen
PubliconcotrialLLM
Publicflexynesis_manuscript
Publicpigx_docs
PublicDocumentation for PiGxspatialNetSmooth
Publicscregseg
PublicspatialNetSmooth_scripts
Publicflexynesis-benchmarks
Publicscmaui-experiments
PublicTutorials for scMauiikarus
PublicIdentifying tumor cells at the single-cell level using machine learningtibanna-bimsb
PublicTibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.pigx-common
PublicnetSmooth
PublicnetSmooth: A Network smoothing based method for Single Cell RNA-seq imputationpigx_chipseq
Publicrcas-web
Publicbimsbbioinfo.github.io
PublicBayesPrism
PublicGEOparse
PublicRCAS
PublicR package for the RNA Centric Annotation System (RCAS)