From 16b1aa799e2b826f6bc8612c252da125cd5bcc4f Mon Sep 17 00:00:00 2001 From: Pavel Makarichev Date: Thu, 8 Jun 2023 11:38:43 +0300 Subject: [PATCH] chore(s3_delta): Add s3_delta (#36) --- config_examples/s3_delta.yaml | 30 + odd_collector_aws/adapters/athena/adapter.py | 15 +- .../athena/mappers/columns/__init__.py | 6 +- .../columns/athena_field_type_transformer.py | 2 +- .../adapters/athena/mappers/metadata.py | 2 +- .../adapters/athena/mappers/tables.py | 3 +- .../adapters/athena/mappers/types.py | 1 + odd_collector_aws/adapters/dms/adapter.py | 16 +- odd_collector_aws/adapters/dms/client.py | 2 +- .../adapters/dms/mappers/endpoints.py | 69 +- .../adapters/dms/mappers/metadata.py | 3 +- .../adapters/dms/mappers/tables.py | 102 +- .../adapters/dms/mappers/tasks.py | 70 +- .../adapters/dms/tests/raw_data.py | 48 +- .../adapters/dynamodb/adapter.py | 14 +- .../adapters/dynamodb/metadata.py | 15 +- odd_collector_aws/adapters/glue/adapter.py | 23 +- .../adapters/glue/mappers/columns/__init__.py | 14 +- .../glue/mappers/columns/field_stat_schema.py | 2 +- .../columns/glue_field_type_transformer.py | 2 +- .../adapters/glue/mappers/jobs.py | 8 +- .../adapters/glue/mappers/metadata.py | 2 +- .../adapters/glue/mappers/tables.py | 2 +- odd_collector_aws/adapters/kinesis/adapter.py | 5 +- .../adapters/kinesis/mappers/metadata.py | 3 +- .../adapters/kinesis/mappers/streams.py | 3 +- .../adapters/quicksight/adapter.py | 24 +- .../adapters/quicksight/mappers/analysis.py | 6 +- .../quicksight/mappers/columns/__init__.py | 2 +- .../adapters/quicksight/mappers/dashboards.py | 6 +- .../quicksight/mappers/data_sources.py | 4 +- .../adapters/quicksight/mappers/datasets.py | 12 +- .../adapters/quicksight/mappers/metadata.py | 2 +- .../adapters/s3_delta/__init__.py | 0 .../adapters/s3_delta/adapter.py | 39 + odd_collector_aws/adapters/s3_delta/client.py | 108 ++ .../adapters/s3_delta/generator.py | 0 odd_collector_aws/adapters/s3_delta/logger.py | 1 + .../adapters/s3_delta/mappers/__init__.py | 0 .../adapters/s3_delta/mappers/delta_table.py | 30 + .../adapters/s3_delta/mappers/field.py | 60 + .../adapters/s3_delta/mappers/metadata.py | 22 + .../adapters/s3_delta/models/__init__.py | 0 .../adapters/s3_delta/models/table.py | 18 + .../adapters/sagemaker/domain/__init__.py | 12 +- .../sagemaker_featurestore/adapter.py | 5 +- .../mappers/metadata.py | 2 +- odd_collector_aws/adapters/sqs/adapter.py | 13 +- odd_collector_aws/domain/fetch_paginator.py | 8 +- odd_collector_aws/domain/paginator_config.py | 2 +- odd_collector_aws/domain/plugin.py | 25 +- odd_collector_aws/utils/__init__.py | 2 +- odd_collector_aws/utils/create_generator.py | 17 +- odd_collector_aws/utils/flat_list_get.py | 2 +- poetry.lock | 1619 +++++++++-------- pyproject.toml | 5 +- tests/utils/get_dataset_class.py | 52 +- 57 files changed, 1518 insertions(+), 1042 deletions(-) create mode 100644 config_examples/s3_delta.yaml create mode 100644 odd_collector_aws/adapters/s3_delta/__init__.py create mode 100644 odd_collector_aws/adapters/s3_delta/adapter.py create mode 100644 odd_collector_aws/adapters/s3_delta/client.py create mode 100644 odd_collector_aws/adapters/s3_delta/generator.py create mode 100644 odd_collector_aws/adapters/s3_delta/logger.py create mode 100644 odd_collector_aws/adapters/s3_delta/mappers/__init__.py create mode 100644 odd_collector_aws/adapters/s3_delta/mappers/delta_table.py create mode 100644 odd_collector_aws/adapters/s3_delta/mappers/field.py create mode 100644 odd_collector_aws/adapters/s3_delta/mappers/metadata.py create mode 100644 odd_collector_aws/adapters/s3_delta/models/__init__.py create mode 100644 odd_collector_aws/adapters/s3_delta/models/table.py diff --git a/config_examples/s3_delta.yaml b/config_examples/s3_delta.yaml new file mode 100644 index 0000000..457e657 --- /dev/null +++ b/config_examples/s3_delta.yaml @@ -0,0 +1,30 @@ +# S3 Delta Lake Adapter +default_pulling_interval: 10 +token: +platform_host_url: "http://localhost:8080" +plugins: + - type: s3_delta + name: s3_adapter + aws_access_key_id: + aws_secret_access_key: + aws_region: + # aws_session_token: # optional if you want to specify the aws session token + delta_tables: + - bucket: bucket + prefix: delta_data + + +# Minio S3 Delta Lake Adapter +default_pulling_interval: 10 +token: +platform_host_url: "http://localhost:8080" +plugins: + - type: s3_delta + name: s3_adapter + endpoint_url: http://localhost:9000 + aws_storage_allow_http: True + aws_access_key_id: minioadmin + aws_secret_access_key: minioadmin + delta_tables: + - bucket: bucket + prefix: delta_data \ No newline at end of file diff --git a/odd_collector_aws/adapters/athena/adapter.py b/odd_collector_aws/adapters/athena/adapter.py index 4b2bbe2..e399305 100644 --- a/odd_collector_aws/adapters/athena/adapter.py +++ b/odd_collector_aws/adapters/athena/adapter.py @@ -1,15 +1,14 @@ from dataclasses import dataclass -from typing import Dict, Callable, Union, Any, Iterable, Optional, List +from typing import Any, Callable, Dict, Iterable, List, Optional, Union import boto3 from more_itertools import flatten -from odd_models.models import DataEntity -from odd_models.models import DataEntityList -from oddrn_generator import AthenaGenerator from odd_collector_sdk.domain.adapter import AbstractAdapter +from odd_models.models import DataEntity, DataEntityList +from oddrn_generator import AthenaGenerator -from odd_collector_aws.domain.plugin import AthenaPlugin from odd_collector_aws.domain.paginator_config import PaginatorConfig +from odd_collector_aws.domain.plugin import AthenaPlugin from .mappers.tables import map_athena_table @@ -111,8 +110,10 @@ def __fetch_paginator(self, conf: PaginatorConfig) -> Iterable: ) for entity in sdk_response.build_full_result()[conf.list_fetch_key]: - yield entity if conf.mapper is None else conf.mapper( - entity, conf.mapper_args + yield ( + entity + if conf.mapper is None + else conf.mapper(entity, conf.mapper_args) ) if sdk_response.resume_token is None: diff --git a/odd_collector_aws/adapters/athena/mappers/columns/__init__.py b/odd_collector_aws/adapters/athena/mappers/columns/__init__.py index 01aeeb5..09f2700 100644 --- a/odd_collector_aws/adapters/athena/mappers/columns/__init__.py +++ b/odd_collector_aws/adapters/athena/mappers/columns/__init__.py @@ -1,5 +1,5 @@ import logging -from typing import List, Dict, Any +from typing import Any, Dict, List from lark import Lark, LarkError from odd_models.models import DataSetField, DataSetFieldType @@ -58,9 +58,7 @@ def __map_column( name = ( column_name if column_name is not None - else type_parsed["field_name"] - if "field_name" in type_parsed - else athena_type + else type_parsed["field_name"] if "field_name" in type_parsed else athena_type ) resource_name = "keys" if is_key else "values" if is_value else "subcolumns" diff --git a/odd_collector_aws/adapters/athena/mappers/columns/athena_field_type_transformer.py b/odd_collector_aws/adapters/athena/mappers/columns/athena_field_type_transformer.py index 927be27..91186b6 100644 --- a/odd_collector_aws/adapters/athena/mappers/columns/athena_field_type_transformer.py +++ b/odd_collector_aws/adapters/athena/mappers/columns/athena_field_type_transformer.py @@ -1,4 +1,4 @@ -from lark import Transformer, Token +from lark import Token, Transformer class AthenaFieldTypeTransformer(Transformer): diff --git a/odd_collector_aws/adapters/athena/mappers/metadata.py b/odd_collector_aws/adapters/athena/mappers/metadata.py index bdcf716..908dd75 100644 --- a/odd_collector_aws/adapters/athena/mappers/metadata.py +++ b/odd_collector_aws/adapters/athena/mappers/metadata.py @@ -1,5 +1,5 @@ import json -from typing import Any, Dict, Set, Callable +from typing import Any, Callable, Dict, Set from humps.main import decamelize diff --git a/odd_collector_aws/adapters/athena/mappers/tables.py b/odd_collector_aws/adapters/athena/mappers/tables.py index 7c826e6..62b0574 100644 --- a/odd_collector_aws/adapters/athena/mappers/tables.py +++ b/odd_collector_aws/adapters/athena/mappers/tables.py @@ -1,4 +1,4 @@ -from typing import Dict, Any +from typing import Any, Dict from more_itertools import flatten from odd_models.models import DataEntity, DataEntityType, DataSet @@ -15,7 +15,6 @@ def map_athena_table( database_name: str, oddrn_generator: AthenaGenerator, ) -> DataEntity: - data_entity_type = TABLE_TYPES_SQL_TO_ODD.get( raw_table_data["TableType"], DataEntityType.UNKNOWN ) diff --git a/odd_collector_aws/adapters/athena/mappers/types.py b/odd_collector_aws/adapters/athena/mappers/types.py index 6969612..bb1ced4 100644 --- a/odd_collector_aws/adapters/athena/mappers/types.py +++ b/odd_collector_aws/adapters/athena/mappers/types.py @@ -1,4 +1,5 @@ from typing import Dict + from odd_models.models import DataEntityType TABLE_TYPES_SQL_TO_ODD: Dict[str, DataEntityType] = { diff --git a/odd_collector_aws/adapters/dms/adapter.py b/odd_collector_aws/adapters/dms/adapter.py index 74cbe96..64f75be 100644 --- a/odd_collector_aws/adapters/dms/adapter.py +++ b/odd_collector_aws/adapters/dms/adapter.py @@ -1,10 +1,13 @@ -from typing import Iterable, Dict, Any +from typing import Any, Dict, Iterable + from odd_collector_sdk.domain.adapter import AbstractAdapter -from odd_collector_aws.domain.plugin import DmsPlugin -from oddrn_generator.generators import DmsGenerator from odd_models.models import DataEntityList -from odd_collector_aws.domain.paginator_config import PaginatorConfig +from oddrn_generator.generators import DmsGenerator + from odd_collector_aws.domain.fetch_paginator import fetch_paginator +from odd_collector_aws.domain.paginator_config import PaginatorConfig +from odd_collector_aws.domain.plugin import DmsPlugin + from .client import DMSClient from .mappers.tasks import map_dms_task @@ -68,4 +71,7 @@ def _get_endpoints_nodes(self) -> Iterable: def _get_endpoints_nodes_arn_dict(self) -> Dict[str, Any]: endpoint_nodes = self._get_endpoints_nodes() - return {endpoint_node.get('EndpointArn'): endpoint_node for endpoint_node in endpoint_nodes} + return { + endpoint_node.get("EndpointArn"): endpoint_node + for endpoint_node in endpoint_nodes + } diff --git a/odd_collector_aws/adapters/dms/client.py b/odd_collector_aws/adapters/dms/client.py index 0148548..92325e4 100644 --- a/odd_collector_aws/adapters/dms/client.py +++ b/odd_collector_aws/adapters/dms/client.py @@ -1,5 +1,5 @@ -from odd_collector_aws.domain.plugin import AwsPlugin from odd_collector_aws.aws.aws_client import AwsClient +from odd_collector_aws.domain.plugin import AwsPlugin class DMSClient: diff --git a/odd_collector_aws/adapters/dms/mappers/endpoints.py b/odd_collector_aws/adapters/dms/mappers/endpoints.py index e86d4bd..14d0ea2 100644 --- a/odd_collector_aws/adapters/dms/mappers/endpoints.py +++ b/odd_collector_aws/adapters/dms/mappers/endpoints.py @@ -1,13 +1,14 @@ +from abc import abstractmethod +from typing import Any, Dict, List, Type + from oddrn_generator.generators import ( - MssqlGenerator, Generator, - S3Generator, + MongoGenerator, + MssqlGenerator, MysqlGenerator, PostgresqlGenerator, - MongoGenerator, + S3Generator, ) -from typing import Dict, Any, Type, List -from abc import abstractmethod class EndpointEngine: @@ -28,11 +29,15 @@ def get_oddrn_for_schema_name(self, generator: Generator, schema_name: str) -> s pass @abstractmethod - def get_oddrn_for_table_schema_names(self, generator: Generator, schema_name: str, table_name: str) -> str: + def get_oddrn_for_table_schema_names( + self, generator: Generator, schema_name: str, table_name: str + ) -> str: pass @abstractmethod - def extend_schema_oddrn_with_table_name(self, schema_oddrn: str, table_name: str) -> str: + def extend_schema_oddrn_with_table_name( + self, schema_oddrn: str, table_name: str + ) -> str: pass @@ -45,19 +50,25 @@ def get_oddrn_for_schema_name(self, generator: Generator, schema_name: str) -> s generator.set_oddrn_paths(**{self.schemas_path_name: schema_name}) return generator.get_oddrn_by_path(self.schemas_path_name) - def get_oddrn_for_table_schema_names(self, generator: Generator, schema_name: str, table_name: str) -> str: - generator.set_oddrn_paths(**{self.schemas_path_name: schema_name, self.tables_path_name: table_name}) + def get_oddrn_for_table_schema_names( + self, generator: Generator, schema_name: str, table_name: str + ) -> str: + generator.set_oddrn_paths( + **{self.schemas_path_name: schema_name, self.tables_path_name: table_name} + ) return generator.get_oddrn_by_path(self.tables_path_name) - def extend_schema_oddrn_with_table_name(self, schema_oddrn: str, table_name: str) -> str: + def extend_schema_oddrn_with_table_name( + self, schema_oddrn: str, table_name: str + ) -> str: return f"{schema_oddrn}/{self.tables_path_name}/{table_name}" class MongodbEngine(JdbcEngine): engine_name = "mongodb" settings_node_name = "MongoDbSettings" - schemas_path_name = 'schemas' - tables_path_name = 'collections' + schemas_path_name = "schemas" + tables_path_name = "collections" def get_generator(self) -> Generator: return MongoGenerator( @@ -69,8 +80,8 @@ def get_generator(self) -> Generator: class MysqlEngine(JdbcEngine): engine_name = "mysql" settings_node_name = "MySQLSettings" - schemas_path_name = 'schemas' - tables_path_name = 'tables' + schemas_path_name = "schemas" + tables_path_name = "tables" def get_generator(self) -> Generator: return MysqlGenerator( @@ -82,8 +93,8 @@ def get_generator(self) -> Generator: class MariadbEngine(JdbcEngine): engine_name = "mariadb" settings_node_name = "MySQLSettings" - schemas_path_name = 'schemas' - tables_path_name = 'tables' + schemas_path_name = "schemas" + tables_path_name = "tables" def get_generator(self) -> Generator: return MysqlGenerator( @@ -95,8 +106,8 @@ def get_generator(self) -> Generator: class PostgresqlEngine(JdbcEngine): engine_name = "postgres" settings_node_name = "PostgreSQLSettings" - schemas_path_name = 'schemas' - tables_path_name = 'tables' + schemas_path_name = "schemas" + tables_path_name = "tables" def get_generator(self) -> Generator: return PostgresqlGenerator( @@ -108,8 +119,8 @@ def get_generator(self) -> Generator: class MssqlEngine(JdbcEngine): engine_name = "sqlserver" settings_node_name = "MicrosoftSQLServerSettings" - schemas_path_name = 'schemas' - tables_path_name = 'tables' + schemas_path_name = "schemas" + tables_path_name = "tables" def get_generator(self) -> Generator: return MssqlGenerator( @@ -135,17 +146,25 @@ def source_oddrn(self): def get_oddrn_for_schema_name(self, generator: Generator, schema_name: str) -> str: return f"{self.source_oddrn}\\{schema_name}" - def get_oddrn_for_table_schema_names(self, generator: Generator, schema_name: str, table_name: str) -> str: + def get_oddrn_for_table_schema_names( + self, generator: Generator, schema_name: str, table_name: str + ) -> str: return f"{self.source_oddrn}\\{schema_name}\\{table_name}" - def extend_schema_oddrn_with_table_name(self, schema_oddrn: str, table_name: str) -> str: + def extend_schema_oddrn_with_table_name( + self, schema_oddrn: str, table_name: str + ) -> str: return f"{schema_oddrn}\\{table_name}" engines: List[Type[EndpointEngine]] = [ - MssqlEngine, S3Engine, MysqlEngine, - PostgresqlEngine, MariadbEngine, MongodbEngine, - ] + MssqlEngine, + S3Engine, + MysqlEngine, + PostgresqlEngine, + MariadbEngine, + MongodbEngine, +] engines_factory: Dict[str, Type[EndpointEngine]] = { engine.engine_name: engine for engine in engines diff --git a/odd_collector_aws/adapters/dms/mappers/metadata.py b/odd_collector_aws/adapters/dms/mappers/metadata.py index 09dd8ab..eefec37 100644 --- a/odd_collector_aws/adapters/dms/mappers/metadata.py +++ b/odd_collector_aws/adapters/dms/mappers/metadata.py @@ -1,5 +1,6 @@ +from typing import Any, Dict, List + from odd_models.models import MetadataExtension -from typing import List, Dict, Any def create_metadata_extension_list( diff --git a/odd_collector_aws/adapters/dms/mappers/tables.py b/odd_collector_aws/adapters/dms/mappers/tables.py index 0aa32e5..1417cdd 100644 --- a/odd_collector_aws/adapters/dms/mappers/tables.py +++ b/odd_collector_aws/adapters/dms/mappers/tables.py @@ -1,64 +1,90 @@ -from typing import Dict, List, Any -from odd_collector_aws.adapters.dms.mappers.endpoints import EndpointEngine -import requests -from json import loads import copy +from json import loads +from typing import Any, Dict, List + +import requests + +from odd_collector_aws.adapters.dms.mappers.endpoints import EndpointEngine class SelectionMappingRule: def __init__(self, rules_node: Dict[str, Any]): - self.rule_id: str = rules_node['rule-id'] + self.rule_id: str = rules_node["rule-id"] - object_locator = rules_node['object-locator'] + object_locator = rules_node["object-locator"] - self.schema_name: str = None if object_locator['schema-name'] == '%' else object_locator['schema-name'] - self.table_name: str = None if object_locator['table-name'] == '%' else object_locator['table-name'] - self.include: bool = False if rules_node['rule-action'] == 'exclude' else True + self.schema_name: str = ( + None + if object_locator["schema-name"] == "%" + else object_locator["schema-name"] + ) + self.table_name: str = ( + None + if object_locator["table-name"] == "%" + else object_locator["table-name"] + ) + self.include: bool = False if rules_node["rule-action"] == "exclude" else True class EntitiesExtractor: - def __init__(self, rules_nodes: List[Dict[str, Any]], - platform_host_url: str, endpoint_engine: EndpointEngine): - + def __init__( + self, + rules_nodes: List[Dict[str, Any]], + platform_host_url: str, + endpoint_engine: EndpointEngine, + ): self.endpoint_engine = endpoint_engine self.platform_host_url = platform_host_url self.rules_nodes = rules_nodes def __request_items_by_deg(self, oddrn: str) -> List[Dict[str, str]]: - url = f'{self.platform_host_url}/ingestion/entities/degs/children' + url = f"{self.platform_host_url}/ingestion/entities/degs/children" params = {"oddrn": oddrn} resp = requests.get(url=url, params=params) - return loads(resp.content)['items'] + return loads(resp.content)["items"] - def __extract_tables_oddrns_from_items(self, deg_oddrn: str, accum_list: List[str]) -> List[str]: + def __extract_tables_oddrns_from_items( + self, deg_oddrn: str, accum_list: List[str] + ) -> List[str]: items_from_request = self.__request_items_by_deg(deg_oddrn) if len(items_from_request) == 0: return [] for item in items_from_request: - entity_type = item['type'] - if entity_type == 'TABLE': - accum_list.append(item['oddrn']) + entity_type = item["type"] + if entity_type == "TABLE": + accum_list.append(item["oddrn"]) else: - if entity_type == 'DATABASE_SERVICE': - self.__extract_tables_oddrns_from_items(deg_oddrn=item['oddrn'], accum_list=accum_list) + if entity_type == "DATABASE_SERVICE": + self.__extract_tables_oddrns_from_items( + deg_oddrn=item["oddrn"], accum_list=accum_list + ) else: raise NotImplementedError("not implemented entity type yet") return accum_list def __create_selection_rules_list(self) -> List[SelectionMappingRule]: - return [SelectionMappingRule(rule_node) for rule_node in self.rules_nodes if - rule_node["rule-type"] == 'selection'] - - def __one_schema_one_table_strategy(self, schema_name: str, table_name: str) -> List[str]: + return [ + SelectionMappingRule(rule_node) + for rule_node in self.rules_nodes + if rule_node["rule-type"] == "selection" + ] + + def __one_schema_one_table_strategy( + self, schema_name: str, table_name: str + ) -> List[str]: """ returns one table from one schema """ gen = copy.copy(self.endpoint_engine.get_generator()) - table_oddrn = self.endpoint_engine.get_oddrn_for_table_schema_names(gen, schema_name, table_name) + table_oddrn = self.endpoint_engine.get_oddrn_for_table_schema_names( + gen, schema_name, table_name + ) schema_oddrn = self.endpoint_engine.get_oddrn_for_schema_name(gen, schema_name) accum = [] - tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items(schema_oddrn, accum) + tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items( + schema_oddrn, accum + ) if table_oddrn in tables_oddrns_in_platform: return [table_oddrn] return [] @@ -72,7 +98,9 @@ def __one_schema_all_tables_strategy(self, schema_name: str) -> List[str]: gen.set_oddrn_paths(**{self.endpoint_engine.schemas_path_name: schema_name}) schema_oddrn = self.endpoint_engine.get_oddrn_for_schema_name(gen, schema_name) accum = [] - tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items(schema_oddrn, accum) + tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items( + schema_oddrn, accum + ) return tables_oddrns_in_platform def __all_schemas_one_table_strategy(self, table_name: str) -> List[str]: @@ -85,14 +113,16 @@ def __all_schemas_one_table_strategy(self, table_name: str) -> List[str]: items = self.__request_items_by_deg(db_deg_oddrn) schemas_oddrns_in_platform: List[str] = [] for item in items: - if item['type'] == 'DATABASE_SERVICE': - schemas_oddrns_in_platform.append(item['oddrn']) + if item["type"] == "DATABASE_SERVICE": + schemas_oddrns_in_platform.append(item["oddrn"]) else: raise NotImplementedError("not database") tables_oddrns_to_return: List[str] = [] for schema_oddrn in schemas_oddrns_in_platform: - table_oddrn = self.endpoint_engine.extend_schema_oddrn_with_table_name(schema_oddrn, table_name) + table_oddrn = self.endpoint_engine.extend_schema_oddrn_with_table_name( + schema_oddrn, table_name + ) if table_oddrn in tables_in_platform: tables_oddrns_to_return.append(table_oddrn) @@ -106,13 +136,17 @@ def __all_strategy(self) -> List[str]: gen = copy.copy(self.endpoint_engine.get_generator()) db_deg_oddrn = gen.get_data_source_oddrn() accum = [] - tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items(db_deg_oddrn, accum) + tables_oddrns_in_platform = self.__extract_tables_oddrns_from_items( + db_deg_oddrn, accum + ) return tables_oddrns_in_platform def __get_oddrns_based_on_rule(self, rule: SelectionMappingRule) -> List[str]: if rule.schema_name is not None: if rule.table_name is not None: - return self.__one_schema_one_table_strategy(rule.schema_name, rule.table_name) + return self.__one_schema_one_table_strategy( + rule.schema_name, rule.table_name + ) else: return self.__one_schema_all_tables_strategy(rule.schema_name) else: @@ -133,7 +167,9 @@ def get_oddrns_list(self): else: exclude_oddrns += oddrns - oddrns_after_exclusion = [oddrn for oddrn in all_tables_oddrns if oddrn not in exclude_oddrns] + oddrns_after_exclusion = [ + oddrn for oddrn in all_tables_oddrns if oddrn not in exclude_oddrns + ] if len(include_oddrns) == 0: return oddrns_after_exclusion return [oddrn for oddrn in include_oddrns if oddrn in oddrns_after_exclusion] diff --git a/odd_collector_aws/adapters/dms/mappers/tasks.py b/odd_collector_aws/adapters/dms/mappers/tasks.py index b6ce5c5..8bfe0a1 100644 --- a/odd_collector_aws/adapters/dms/mappers/tasks.py +++ b/odd_collector_aws/adapters/dms/mappers/tasks.py @@ -1,23 +1,26 @@ +import os +from datetime import datetime +from json import loads +from typing import Any, Dict, List, Type, Union + from odd_models.models import ( DataEntity, DataEntityType, DataTransformer, - JobRunStatus, DataTransformerRun, + JobRunStatus, ) -from typing import Dict, Any, Type, List, Union -from datetime import datetime +from oddrn_generator.generators import DmsGenerator +from yaml import safe_load + from odd_collector_aws.adapters.dms import ( - _keys_to_include_task, _METADATA_SCHEMA_URL_PREFIX, + _keys_to_include_task, ) -from oddrn_generator.generators import DmsGenerator + +from .endpoints import EndpointEngine, engines_factory from .metadata import create_metadata_extension_list -from json import loads from .tables import EntitiesExtractor -from .endpoints import engines_factory, EndpointEngine -import os -from yaml import safe_load DMS_TASK_STATUSES: Dict[str, JobRunStatus] = { "creating": JobRunStatus.UNKNOWN, @@ -35,10 +38,13 @@ class IOTransformer: - def __init__(self, endpoints_arn_dict: Dict[str, Dict[str, Any]], - raw_job_data: Dict[str, Any], factory: Dict[str, Type[EndpointEngine]], - rules_nodes: List[Dict[str, Any]] - ): + def __init__( + self, + endpoints_arn_dict: Dict[str, Dict[str, Any]], + raw_job_data: Dict[str, Any], + factory: Dict[str, Type[EndpointEngine]], + rules_nodes: List[Dict[str, Any]], + ): self.rules_nodes = rules_nodes self.factory = factory self.raw_job_data = raw_job_data @@ -46,11 +52,11 @@ def __init__(self, endpoints_arn_dict: Dict[str, Dict[str, Any]], @property def __input_endpoint_node(self) -> Dict[str, Any]: - return self.__get_endpoint_node('SourceEndpointArn') + return self.__get_endpoint_node("SourceEndpointArn") @property def __output_endpoint_node(self) -> Dict[str, Any]: - return self.__get_endpoint_node('TargetEndpointArn') + return self.__get_endpoint_node("TargetEndpointArn") def __get_endpoint_node(self, arn_node_name: str) -> Dict[str, Any]: return self.endpoints_arn_dict.get(self.raw_job_data.get(arn_node_name)) @@ -58,17 +64,21 @@ def __get_endpoint_node(self, arn_node_name: str) -> Dict[str, Any]: @staticmethod def __get_platform_host_url() -> str: config_file_name = "collector_config.yaml" - path = os.path.dirname(os.path.abspath(config_file_name)) + '/' + config_file_name + path = ( + os.path.dirname(os.path.abspath(config_file_name)) + "/" + config_file_name + ) with open(path) as f: config_dict: Dict[str, Any] = safe_load(f) - return config_dict['platform_host_url'] + return config_dict["platform_host_url"] @property def __platform_host_url(self): return self.__get_platform_host_url() - def __find_endpoint_engine_cls(self, endpoint_node: Dict[str, Any]) -> Union[Type[EndpointEngine], None]: - engine_name = endpoint_node.get('EngineName') + def __find_endpoint_engine_cls( + self, endpoint_node: Dict[str, Any] + ) -> Union[Type[EndpointEngine], None]: + engine_name = endpoint_node.get("EngineName") return self.factory.get(engine_name) def __extract_oddrns(self, endpoint_node: Dict[str, Any]) -> List[str]: @@ -76,7 +86,9 @@ def __extract_oddrns(self, endpoint_node: Dict[str, Any]) -> List[str]: if endpoint_engine_cls is None: return [] endpoint_engine = endpoint_engine_cls(endpoint_node) - extractor = EntitiesExtractor(self.rules_nodes, self.__get_platform_host_url(), endpoint_engine) + extractor = EntitiesExtractor( + self.rules_nodes, self.__get_platform_host_url(), endpoint_engine + ) return extractor.get_oddrns_list() def extract_input_oddrns(self): @@ -87,17 +99,19 @@ def extract_output_oddrns(self): def map_dms_task( - raw_job_data: Dict[str, Any], mapper_args: Dict[str, Any] + raw_job_data: Dict[str, Any], mapper_args: Dict[str, Any] ) -> DataEntity: oddrn_generator: DmsGenerator = mapper_args["oddrn_generator"] endpoints_arn_dict: Dict[str, Dict[str, Any]] = mapper_args["endpoints_arn_dict"] - rules_nodes: List[Dict[str, Any]] = loads(raw_job_data['TableMappings'])['rules'] + rules_nodes: List[Dict[str, Any]] = loads(raw_job_data["TableMappings"])["rules"] - io_transformer = IOTransformer(endpoints_arn_dict, raw_job_data, engines_factory, rules_nodes) + io_transformer = IOTransformer( + endpoints_arn_dict, raw_job_data, engines_factory, rules_nodes + ) trans = DataTransformer( inputs=io_transformer.extract_input_oddrns(), - outputs=io_transformer.extract_output_oddrns() + outputs=io_transformer.extract_output_oddrns(), ) data_entity_task = DataEntity( oddrn=oddrn_generator.get_oddrn_by_path( @@ -116,7 +130,7 @@ def map_dms_task( def map_dms_task_run( - raw_job_data: Dict[str, Any], mapper_args: Dict[str, Any] + raw_job_data: Dict[str, Any], mapper_args: Dict[str, Any] ) -> DataEntity: oddrn_generator: DmsGenerator = mapper_args["oddrn_generator"] oddrn_generator.get_oddrn_by_path( @@ -134,9 +148,9 @@ def map_dms_task_run( start_time=datetime(2022, 9, 24), end_time=datetime(2022, 9, 25), transformer_oddrn=oddrn_generator.get_oddrn_by_path("tasks"), - status_reason=raw_job_data.get("StopReason") - if status == "failed" - else None, + status_reason=( + raw_job_data.get("StopReason") if status == "failed" else None + ), status=status, ), ) diff --git a/odd_collector_aws/adapters/dms/tests/raw_data.py b/odd_collector_aws/adapters/dms/tests/raw_data.py index 3a8015f..689cfea 100644 --- a/odd_collector_aws/adapters/dms/tests/raw_data.py +++ b/odd_collector_aws/adapters/dms/tests/raw_data.py @@ -1,13 +1,25 @@ - -endpoint_node = {'EndpointIdentifier': 'database-1id', 'EndpointType': 'SOURCE', 'EngineName': 'sqlserver', - 'EngineDisplayName': 'Microsoft SQL Server', 'Username': 'admin', - 'ServerName': 'database-1.cs2rwctroxbf.eu-west-2.rds.amazonaws.com', 'Port': 1433, - 'DatabaseName': 'test_db', 'Status': 'active', - 'KmsKeyId': 'arn:aws:kms:eu-west-2:245260513500:key/a802067a-e288-441f-b63f-a7ecb5b783f4', - 'EndpointArn': 'arn:aws:dms:eu-west-2:245260513500:endpoint:7DRJ5QSHOPBBCAYW76EA6SHZXMBCCV67XHPML4Y', - 'SslMode': 'none', 'MicrosoftSQLServerSettings': {'Port': 1433, 'DatabaseName': 'test_db', - 'ServerName': 'database-1.cs2rwctroxbf.eu-west-2.rds.amazonaws.com', - 'Username': 'admin'}} +endpoint_node = { + "EndpointIdentifier": "database-1id", + "EndpointType": "SOURCE", + "EngineName": "sqlserver", + "EngineDisplayName": "Microsoft SQL Server", + "Username": "admin", + "ServerName": "database-1.cs2rwctroxbf.eu-west-2.rds.amazonaws.com", + "Port": 1433, + "DatabaseName": "test_db", + "Status": "active", + "KmsKeyId": ( + "arn:aws:kms:eu-west-2:245260513500:key/a802067a-e288-441f-b63f-a7ecb5b783f4" + ), + "EndpointArn": "arn:aws:dms:eu-west-2:245260513500:endpoint:7DRJ5QSHOPBBCAYW76EA6SHZXMBCCV67XHPML4Y", + "SslMode": "none", + "MicrosoftSQLServerSettings": { + "Port": 1433, + "DatabaseName": "test_db", + "ServerName": "database-1.cs2rwctroxbf.eu-west-2.rds.amazonaws.com", + "Username": "admin", + }, +} """ "schema-name": "test_schema", @@ -20,24 +32,18 @@ "rule-type": "selection", "rule-id": "814375997", "rule-name": "814375997", - "object-locator": { - "schema-name": "%", - "table-name": "%" - }, + "object-locator": {"schema-name": "%", "table-name": "%"}, "rule-action": "include", - "filters": [] + "filters": [], }, { "rule-type": "selection", "rule-id": "856276228", "rule-name": "856276228", - "object-locator": { - "schema-name": "1%", - "table-name": "2" - }, + "object-locator": {"schema-name": "1%", "table-name": "2"}, "rule-action": "exclude", - "filters": [] - } + "filters": [], + }, ] # ggen = MssqlGenerator(host_settings='database-1.cs2rwctroxbf.eu-west-2.rds.amazonaws.com', databases='test_db') # ee = EntitiesExtractor(rules_nodes=r, diff --git a/odd_collector_aws/adapters/dynamodb/adapter.py b/odd_collector_aws/adapters/dynamodb/adapter.py index 40b2f33..cb832ed 100644 --- a/odd_collector_aws/adapters/dynamodb/adapter.py +++ b/odd_collector_aws/adapters/dynamodb/adapter.py @@ -1,20 +1,20 @@ from dataclasses import dataclass, field -from typing import Dict, Union, Callable, Any, Iterable, List +from typing import Any, Callable, Dict, Iterable, List, Union import boto3 +from odd_collector_sdk.domain.adapter import AbstractAdapter from odd_models.models import ( DataEntity, + DataEntityList, DataEntityType, DataSet, DataSetField, DataSetFieldType, ) -from odd_models.models import DataEntityList from oddrn_generator import DynamodbGenerator -from odd_collector_sdk.domain.adapter import AbstractAdapter -from odd_collector_aws.domain.plugin import DynamoDbPlugin from odd_collector_aws.domain.paginator_config import PaginatorConfig +from odd_collector_aws.domain.plugin import DynamoDbPlugin from .metadata import MetadataExtractor @@ -105,8 +105,10 @@ def __fetch_paginator(self, conf: PaginatorConfig) -> Iterable: ) for entity in sdk_response_payload: - yield entity if conf.mapper is None else conf.mapper( - entity, conf.mapper_args + yield ( + entity + if conf.mapper is None + else conf.mapper(entity, conf.mapper_args) ) if sdk_response.resume_token is None: diff --git a/odd_collector_aws/adapters/dynamodb/metadata.py b/odd_collector_aws/adapters/dynamodb/metadata.py index 8ad2870..bffbe0c 100644 --- a/odd_collector_aws/adapters/dynamodb/metadata.py +++ b/odd_collector_aws/adapters/dynamodb/metadata.py @@ -1,4 +1,4 @@ -from typing import Any, Dict, Set, Callable +from typing import Any, Callable, Dict, Set from humps import decamelize @@ -41,11 +41,14 @@ def __extract_all_entries( entries[decamelize(k)] = ( self.__extract_all_entries(v, exclude, key_prefix) if isinstance(v, dict) - else [ - self.__extract_all_entries(_v, exclude, key_prefix) for _v in v - ] - if isinstance(v, list) - else v + else ( + [ + self.__extract_all_entries(_v, exclude, key_prefix) + for _v in v + ] + if isinstance(v, list) + else v + ) ) return entries diff --git a/odd_collector_aws/adapters/glue/adapter.py b/odd_collector_aws/adapters/glue/adapter.py index 8513f12..4c59f9e 100644 --- a/odd_collector_aws/adapters/glue/adapter.py +++ b/odd_collector_aws/adapters/glue/adapter.py @@ -1,24 +1,19 @@ -import boto3 +from itertools import chain +from typing import Any, Dict, Iterable -from typing import Dict -from typing import Any -from typing import Iterable +import boto3 from more_itertools import chunked, flatten - -from odd_models.models import DataEntity -from odd_models.models import DataEntityList +from odd_collector_sdk.domain.adapter import AbstractAdapter +from odd_models.models import DataEntity, DataEntityList from oddrn_generator import GlueGenerator -from odd_collector_sdk.domain.adapter import AbstractAdapter -from odd_collector_aws.domain.plugin import GluePlugin from odd_collector_aws.domain.paginator_config import PaginatorConfig +from odd_collector_aws.domain.plugin import GluePlugin from .mappers.columns import map_column_stats from .mappers.jobs import map_glue_job, map_glue_job_run from .mappers.tables import map_glue_table -from itertools import chain - SDK_DATASET_MAX_RESULTS = 1000 SDK_DATASET_COL_STATS_MAX_RESULTS = 100 SDK_DATA_TRANSFORMERS_MAX_RESULTS = 100 @@ -130,8 +125,10 @@ def __fetch_paginator(self, conf: PaginatorConfig) -> Iterable: ) for entity in sdk_response.build_full_result()[conf.list_fetch_key]: - yield entity if conf.mapper is None else conf.mapper( - entity, conf.mapper_args + yield ( + entity + if conf.mapper is None + else conf.mapper(entity, conf.mapper_args) ) if sdk_response.resume_token is None: diff --git a/odd_collector_aws/adapters/glue/mappers/columns/__init__.py b/odd_collector_aws/adapters/glue/mappers/columns/__init__.py index 06a8a07..2861b95 100644 --- a/odd_collector_aws/adapters/glue/mappers/columns/__init__.py +++ b/odd_collector_aws/adapters/glue/mappers/columns/__init__.py @@ -1,5 +1,5 @@ import logging -from typing import List, Tuple, Dict, Any, Iterable +from typing import Any, Dict, Iterable, List, Tuple from lark import Lark, LarkError from odd_models.models import DataSetField, DataSetFieldType @@ -60,18 +60,18 @@ def __map_column( name = ( column_name if column_name is not None - else type_parsed["field_name"] - if "field_name" in type_parsed - else glue_type + else type_parsed["field_name"] if "field_name" in type_parsed else glue_type ) resource_name = "keys" if is_key else "values" if is_value else "subcolumns" dsf = DataSetField( name=name, - oddrn=oddrn_generator.get_oddrn_by_path("columns", name) - if parent_oddrn is None - else f"{parent_oddrn}/{resource_name}/{name}", + oddrn=( + oddrn_generator.get_oddrn_by_path("columns", name) + if parent_oddrn is None + else f"{parent_oddrn}/{resource_name}/{name}" + ), parent_field_oddrn=parent_oddrn, type=DataSetFieldType( type=__map_glue_type(glue_type), diff --git a/odd_collector_aws/adapters/glue/mappers/columns/field_stat_schema.py b/odd_collector_aws/adapters/glue/mappers/columns/field_stat_schema.py index 0f82efc..ee4bc13 100644 --- a/odd_collector_aws/adapters/glue/mappers/columns/field_stat_schema.py +++ b/odd_collector_aws/adapters/glue/mappers/columns/field_stat_schema.py @@ -2,11 +2,11 @@ from typing import Any, Dict from odd_models.models import ( + BinaryFieldStat, BooleanFieldStat, DateTimeFieldStat, NumberFieldStat, StringFieldStat, - BinaryFieldStat, ) diff --git a/odd_collector_aws/adapters/glue/mappers/columns/glue_field_type_transformer.py b/odd_collector_aws/adapters/glue/mappers/columns/glue_field_type_transformer.py index 51606f7..56b6ebc 100644 --- a/odd_collector_aws/adapters/glue/mappers/columns/glue_field_type_transformer.py +++ b/odd_collector_aws/adapters/glue/mappers/columns/glue_field_type_transformer.py @@ -1,4 +1,4 @@ -from lark import Transformer, Token +from lark import Token, Transformer class GlueFieldTypeTransformer(Transformer): diff --git a/odd_collector_aws/adapters/glue/mappers/jobs.py b/odd_collector_aws/adapters/glue/mappers/jobs.py index 1194b06..03ebf11 100644 --- a/odd_collector_aws/adapters/glue/mappers/jobs.py +++ b/odd_collector_aws/adapters/glue/mappers/jobs.py @@ -1,4 +1,4 @@ -from typing import Dict, Any +from typing import Any, Dict from odd_models.models import ( DataEntity, @@ -64,9 +64,9 @@ def map_glue_job_run( start_time=raw_job_run_data["StartedOn"].isoformat(), end_time=raw_job_run_data["CompletedOn"].isoformat(), transformer_oddrn=oddrn_generator.get_oddrn_by_path("jobs"), - status_reason=raw_job_run_data["ErrorMessage"] - if status == "Fail" - else None, + status_reason=( + raw_job_run_data["ErrorMessage"] if status == "Fail" else None + ), status=status, ), ) diff --git a/odd_collector_aws/adapters/glue/mappers/metadata.py b/odd_collector_aws/adapters/glue/mappers/metadata.py index 966427e..59106e8 100644 --- a/odd_collector_aws/adapters/glue/mappers/metadata.py +++ b/odd_collector_aws/adapters/glue/mappers/metadata.py @@ -1,5 +1,5 @@ import json -from typing import Any, Dict, Set, Callable +from typing import Any, Callable, Dict, Set from humps.main import decamelize diff --git a/odd_collector_aws/adapters/glue/mappers/tables.py b/odd_collector_aws/adapters/glue/mappers/tables.py index efba2e8..cecee89 100644 --- a/odd_collector_aws/adapters/glue/mappers/tables.py +++ b/odd_collector_aws/adapters/glue/mappers/tables.py @@ -1,4 +1,4 @@ -from typing import Dict, Any +from typing import Any, Dict from more_itertools import flatten from odd_models.models import DataEntity, DataEntityType, DataSet, DataSetField diff --git a/odd_collector_aws/adapters/kinesis/adapter.py b/odd_collector_aws/adapters/kinesis/adapter.py index 5c097b5..06fc38d 100644 --- a/odd_collector_aws/adapters/kinesis/adapter.py +++ b/odd_collector_aws/adapters/kinesis/adapter.py @@ -1,9 +1,10 @@ -import boto3 - from typing import List + +import boto3 from odd_collector_sdk.domain.adapter import AbstractAdapter from odd_models.models import DataEntity, DataEntityList from oddrn_generator import KinesisGenerator + from .mappers.streams import map_kinesis_stream diff --git a/odd_collector_aws/adapters/kinesis/mappers/metadata.py b/odd_collector_aws/adapters/kinesis/mappers/metadata.py index 7f94cda..f711cdc 100644 --- a/odd_collector_aws/adapters/kinesis/mappers/metadata.py +++ b/odd_collector_aws/adapters/kinesis/mappers/metadata.py @@ -1,11 +1,10 @@ import json -from typing import Any, Dict, Set, Callable +from typing import Any, Callable, Dict, Set SCHEMA_FILE_URL = "https://raw.githubusercontent.com/opendatadiscovery/" class MetadataExtractor: - # attributes to exclude from metadata __data_entity_excludes = {"StreamName"} diff --git a/odd_collector_aws/adapters/kinesis/mappers/streams.py b/odd_collector_aws/adapters/kinesis/mappers/streams.py index 08f0268..83c3cad 100644 --- a/odd_collector_aws/adapters/kinesis/mappers/streams.py +++ b/odd_collector_aws/adapters/kinesis/mappers/streams.py @@ -1,7 +1,8 @@ -from typing import Dict, Any +from typing import Any, Dict from odd_models.models import DataEntity, DataEntityType from oddrn_generator import KinesisGenerator + from . import metadata_extractor diff --git a/odd_collector_aws/adapters/quicksight/adapter.py b/odd_collector_aws/adapters/quicksight/adapter.py index ee182cb..9c7205d 100644 --- a/odd_collector_aws/adapters/quicksight/adapter.py +++ b/odd_collector_aws/adapters/quicksight/adapter.py @@ -1,22 +1,20 @@ import logging -from typing import Dict, Any, Iterable, List from itertools import chain - -from odd_collector_aws.domain.plugin import QuicksightPlugin -from odd_collector_aws.domain.paginator_config import PaginatorConfig +from typing import Any, Dict, Iterable, List import boto3 from more_itertools import flatten -from odd_models.models import DataEntity -from odd_models.models import DataEntityList - -from oddrn_generator import QuicksightGenerator from odd_collector_sdk.domain.adapter import AbstractAdapter +from odd_models.models import DataEntity, DataEntityList +from oddrn_generator import QuicksightGenerator + +from odd_collector_aws.domain.paginator_config import PaginatorConfig +from odd_collector_aws.domain.plugin import QuicksightPlugin -from .mappers.datasets import map_quicksight_dataset -from .mappers.dashboards import map_quicksight_dashboard from .mappers.analysis import map_quicksight_analysis +from .mappers.dashboards import map_quicksight_dashboard from .mappers.data_sources import map_quicksight_data_sources +from .mappers.datasets import map_quicksight_dataset SDK_DATASET_MAX_RESULTS = 1000 SDK_DATASET_COL_STATS_MAX_RESULTS = 100 @@ -181,8 +179,10 @@ def __fetch_paginator(self, conf: PaginatorConfig) -> Iterable: ) for entity in sdk_response.build_full_result()[conf.list_fetch_key]: - yield entity if conf.mapper is None else conf.mapper( - entity, conf.mapper_args + yield ( + entity + if conf.mapper is None + else conf.mapper(entity, conf.mapper_args) ) if sdk_response.resume_token is None: diff --git a/odd_collector_aws/adapters/quicksight/mappers/analysis.py b/odd_collector_aws/adapters/quicksight/mappers/analysis.py index 91b9cfc..b9eabc6 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/analysis.py +++ b/odd_collector_aws/adapters/quicksight/mappers/analysis.py @@ -1,9 +1,9 @@ -from typing import Dict, Any +from typing import Any, Dict -from odd_models.models import DataEntity, DataEntityType, DataConsumer +from odd_models.models import DataConsumer, DataEntity, DataEntityType +from oddrn_generator import QuicksightGenerator from . import metadata_extractor -from oddrn_generator import QuicksightGenerator def map_quicksight_analysis( diff --git a/odd_collector_aws/adapters/quicksight/mappers/columns/__init__.py b/odd_collector_aws/adapters/quicksight/mappers/columns/__init__.py index fe3a103..e89d316 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/columns/__init__.py +++ b/odd_collector_aws/adapters/quicksight/mappers/columns/__init__.py @@ -1,4 +1,4 @@ -from typing import List, Dict, Any +from typing import Any, Dict, List from odd_models.models import DataSetField, DataSetFieldType diff --git a/odd_collector_aws/adapters/quicksight/mappers/dashboards.py b/odd_collector_aws/adapters/quicksight/mappers/dashboards.py index 699e660..6e025bf 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/dashboards.py +++ b/odd_collector_aws/adapters/quicksight/mappers/dashboards.py @@ -1,9 +1,9 @@ -from typing import Dict, Any +from typing import Any, Dict -from odd_models.models import DataEntity, DataEntityType, DataConsumer +from odd_models.models import DataConsumer, DataEntity, DataEntityType +from oddrn_generator import QuicksightGenerator from . import metadata_extractor -from oddrn_generator import QuicksightGenerator def map_quicksight_dashboard( diff --git a/odd_collector_aws/adapters/quicksight/mappers/data_sources.py b/odd_collector_aws/adapters/quicksight/mappers/data_sources.py index e89fe13..1bca507 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/data_sources.py +++ b/odd_collector_aws/adapters/quicksight/mappers/data_sources.py @@ -1,9 +1,9 @@ -from typing import Dict, Any +from typing import Any, Dict from odd_models.models import DataEntity, DataEntityType +from oddrn_generator import QuicksightGenerator from . import metadata_extractor -from oddrn_generator import QuicksightGenerator def map_quicksight_data_sources( diff --git a/odd_collector_aws/adapters/quicksight/mappers/datasets.py b/odd_collector_aws/adapters/quicksight/mappers/datasets.py index 8c30520..a20454c 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/datasets.py +++ b/odd_collector_aws/adapters/quicksight/mappers/datasets.py @@ -1,18 +1,18 @@ -from typing import Dict, Any +from typing import Any, Dict from more_itertools import flatten from odd_models.models import DataEntity, DataEntityType, DataSet, DataTransformer - -from . import metadata_extractor -from .columns import map_column from oddrn_generator import ( - QuicksightGenerator, AthenaGenerator, - PostgresqlGenerator, MysqlGenerator, + PostgresqlGenerator, + QuicksightGenerator, SnowflakeGenerator, ) +from . import metadata_extractor +from .columns import map_column + def map_quicksight_dataset( raw_dataset_data: Dict[str, Any], diff --git a/odd_collector_aws/adapters/quicksight/mappers/metadata.py b/odd_collector_aws/adapters/quicksight/mappers/metadata.py index 2d628eb..2165c40 100644 --- a/odd_collector_aws/adapters/quicksight/mappers/metadata.py +++ b/odd_collector_aws/adapters/quicksight/mappers/metadata.py @@ -1,5 +1,5 @@ import json -from typing import Any, Dict, Set, Callable +from typing import Any, Callable, Dict, Set from humps.main import decamelize diff --git a/odd_collector_aws/adapters/s3_delta/__init__.py b/odd_collector_aws/adapters/s3_delta/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/odd_collector_aws/adapters/s3_delta/adapter.py b/odd_collector_aws/adapters/s3_delta/adapter.py new file mode 100644 index 0000000..4305560 --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/adapter.py @@ -0,0 +1,39 @@ +from typing import Union + +from funcy import lmap, partial +from odd_collector_sdk.domain.adapter import BaseAdapter +from odd_models.models import DataEntityList +from oddrn_generator.generators import Generator, S3Generator + +from odd_collector_aws.domain.plugin import S3DeltaPlugin +from odd_collector_aws.utils.create_generator import create_generator + +from .client import DeltaClient +from .logger import logger +from .mappers.delta_table import map_delta_table + +# TODO: Add tags +# TODO: Complex types types + + +class Adapter(BaseAdapter): + config: S3DeltaPlugin + generator: Union[Generator, S3Generator] + + def __init__(self, config: S3DeltaPlugin) -> None: + super().__init__(config) + self.client = DeltaClient(config=config) + + def create_generator(self) -> Generator: + return create_generator(S3Generator, self.config) + + def get_data_entity_list(self) -> DataEntityList: + logger.debug(f"Getting data entity list for {self.config.delta_tables}") + + tables = lmap(self.client.get_table, self.config.delta_tables) + data_entities = lmap(partial(map_delta_table, self.generator), tables) + + return DataEntityList( + data_source_oddrn=self.generator.get_data_source_oddrn(), + items=list(data_entities), + ) diff --git a/odd_collector_aws/adapters/s3_delta/client.py b/odd_collector_aws/adapters/s3_delta/client.py new file mode 100644 index 0000000..b3f30e4 --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/client.py @@ -0,0 +1,108 @@ +import datetime +import traceback as tb +from dataclasses import asdict, dataclass +from typing import Optional + +from deltalake import DeltaTable +from funcy import complement, isnone, last, partial, select_values, silent, walk + +from odd_collector_aws.domain.plugin import DeltaTableConfig, S3DeltaPlugin + +from .logger import logger +from .models.table import DTable + + +def from_ms(ms) -> datetime.datetime: + return datetime.datetime.fromtimestamp(ms / 1000, tz=datetime.timezone.utc) + + +def add_utc_timezone(dt: datetime.datetime) -> datetime.datetime: + return dt.replace(tzinfo=datetime.timezone.utc) + + +def handle_values(obj: dict, handler: tuple[str, callable]) -> dict[str, Optional[any]]: + key, callback = handler + return key, silent(callback)(obj.get(key)) + + +@dataclass +class StorageOptions: + DEFAULT_REGION = "us-east-1" + + aws_access_key_id: str = None + aws_secret_access_key: str = None + aws_region: str = None + aws_session_token: str = None + aws_storage_allow_http: bool = None + endpoint_url: str = None + + @classmethod + def from_config(cls, config: S3DeltaPlugin) -> "StorageOptions": + return cls( + aws_access_key_id=config.aws_access_key_id, + aws_secret_access_key=config.aws_secret_access_key, + aws_region=config.aws_region or cls.DEFAULT_REGION, + aws_session_token=config.aws_session_token, + aws_storage_allow_http="true" if config.aws_storage_allow_http else None, + endpoint_url=config.endpoint_url, + ) + + def to_dict(self) -> dict[str, str]: + return select_values(complement(isnone), asdict(self)) + + +class DeltaClient: + def __init__(self, config: S3DeltaPlugin) -> None: + self.storage_options: StorageOptions = StorageOptions.from_config(config) + + def get_table(self, delta_table_config: DeltaTableConfig) -> DTable: + # sourcery skip: raise-specific-error + try: + table = DeltaTable( + delta_table_config.path, storage_options=self.storage_options.to_dict() + ) + + metadata = {} + + try: + logger.debug(f"Getting actions list for {delta_table_config.path}") + actions = table.get_add_actions(flatten=True).to_pydict() + + metadata |= walk( + partial(handle_values, actions), + {"size_bytes": sum, "num_records": sum, "modification_time": last}, + ) + except Exception as e: + logger.error( + f"Failed to get actions list for {delta_table_config.path}" + ) + + try: + logger.debug(f"Getting metadata for {delta_table_config.path}") + delta_metadata = table.metadata() + metadata |= { + "id": delta_metadata.id, + "name": delta_metadata.name, + "description": delta_metadata.description, + "partition_columns": ",".join(delta_metadata.partition_columns), + "configuration": delta_metadata.configuration, + "created_time": delta_metadata.created_time, + } + except Exception as e: + logger.debug(tb.format_exc()) + logger.error( + f"Failed to get metadata for {delta_table_config.path}. {e}" + ) + + return DTable( + table_uri=table.table_uri, + schema=table.schema(), + num_rows=metadata.get("num_records"), + metadata=metadata, + created_at=silent(from_ms)(metadata.get("created_time")), + updated_at=silent(add_utc_timezone)(metadata.get("modification_time")), + ) + except Exception as e: + raise Exception( + f"Failed to get delta table {delta_table_config.path}. {e}" + ) from e diff --git a/odd_collector_aws/adapters/s3_delta/generator.py b/odd_collector_aws/adapters/s3_delta/generator.py new file mode 100644 index 0000000..e69de29 diff --git a/odd_collector_aws/adapters/s3_delta/logger.py b/odd_collector_aws/adapters/s3_delta/logger.py new file mode 100644 index 0000000..3e5ed6c --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/logger.py @@ -0,0 +1 @@ +from odd_collector_sdk.logger import logger diff --git a/odd_collector_aws/adapters/s3_delta/mappers/__init__.py b/odd_collector_aws/adapters/s3_delta/mappers/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/odd_collector_aws/adapters/s3_delta/mappers/delta_table.py b/odd_collector_aws/adapters/s3_delta/mappers/delta_table.py new file mode 100644 index 0000000..7735a8e --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/mappers/delta_table.py @@ -0,0 +1,30 @@ +from odd_models.models import DataEntity, DataEntityType, DataSet +from oddrn_generator import S3Generator + +from odd_collector_aws.utils.parse_s3_url import parse_s3_url + +from ..models.table import DTable +from .field import map_field +from .metadata import map_metadata + + +def map_delta_table(generator: S3Generator, delta_table: DTable) -> DataEntity: + bucket, key = parse_s3_url(delta_table.table_uri) + + generator.set_oddrn_paths(buckets=bucket, keys=key) + + return DataEntity( + oddrn=generator.get_oddrn_by_path("keys"), + name=key, + type=DataEntityType.TABLE, + created_at=delta_table.created_at, + updated_at=delta_table.updated_at, + owner=None, + metadata=map_metadata(delta_table), + dataset=DataSet( + rows_number=delta_table.num_rows, + field_list=[ + map_field(generator, field) for field in delta_table.schema.fields + ], + ), + ) diff --git a/odd_collector_aws/adapters/s3_delta/mappers/field.py b/odd_collector_aws/adapters/s3_delta/mappers/field.py new file mode 100644 index 0000000..4181355 --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/mappers/field.py @@ -0,0 +1,60 @@ +from deltalake._internal import ArrayType, Field, MapType, PrimitiveType, StructType +from odd_models.models import DataSetField, DataSetFieldType, Type +from oddrn_generator import S3Generator + +from ..logger import logger + +DELTA_TO_ODD_TYPE_MAP = { + "string": Type.TYPE_STRING, +} + + +def map_to_odd_type(delta_type: str) -> Type: + return DELTA_TO_ODD_TYPE_MAP.get(delta_type, Type.TYPE_UNKNOWN) + + +def unknown_field(generator: S3Generator, field: Field) -> DataSetField: + generator.set_oddrn_paths(columns=field.name) + return DataSetField( + oddrn=generator.get_oddrn_by_path("columns"), + name=field.name, + type=DataSetFieldType( + type=Type.TYPE_UNKNOWN, + logical_type=field.type, + is_nullable=field.nullable, + ), + ) + + +def map_primitive(generator: S3Generator, field: Field) -> DataSetField: + generator.set_oddrn_paths(columns=field.name) + return DataSetField( + oddrn=generator.get_oddrn_by_path("columns"), + name=field.name, + type=DataSetFieldType( + type=map_to_odd_type(field.type.type), + logical_type=field.type.type, + is_nullable=field.nullable, + ), + ) + + +def map_map(generator: S3Generator, field: Field) -> DataSetField: + ... + + +def map_struct(generator: S3Generator, field: Field) -> DataSetField: + ... + + +def map_array(generator: S3Generator, field: Field) -> DataSetField: + ... + + +def map_field(generator: S3Generator, field: Field) -> DataSetField: + type_ = field.type + + if isinstance(type_, PrimitiveType): + return map_primitive(generator, field) + else: + logger.error(f"Unknown field type: {field.type}") diff --git a/odd_collector_aws/adapters/s3_delta/mappers/metadata.py b/odd_collector_aws/adapters/s3_delta/mappers/metadata.py new file mode 100644 index 0000000..2b6112b --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/mappers/metadata.py @@ -0,0 +1,22 @@ +from odd_collector_sdk.utils.metadata import ( + DefinitionType, + MetadataExtension, + extract_metadata, +) + +from ..logger import logger +from ..models.table import DTable + + +def map_metadata(table: DTable) -> list[MetadataExtension]: + try: + return [ + extract_metadata( + datasource="s3", + entity=table, + definition=DefinitionType.DATASET, + ) + ] + except Exception as e: + logger.error("Failed to extract metadata from, error: %s", e) + return [] diff --git a/odd_collector_aws/adapters/s3_delta/models/__init__.py b/odd_collector_aws/adapters/s3_delta/models/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/odd_collector_aws/adapters/s3_delta/models/table.py b/odd_collector_aws/adapters/s3_delta/models/table.py new file mode 100644 index 0000000..3121062 --- /dev/null +++ b/odd_collector_aws/adapters/s3_delta/models/table.py @@ -0,0 +1,18 @@ +from dataclasses import dataclass +from datetime import datetime + +from deltalake import Schema + + +@dataclass +class DTable: + table_uri: str + metadata: dict + schema: Schema + num_rows: int = None + created_at: datetime = None + updated_at: datetime = None + + @property + def odd_metadata(self): + return self.metadata diff --git a/odd_collector_aws/adapters/sagemaker/domain/__init__.py b/odd_collector_aws/adapters/sagemaker/domain/__init__.py index fc01031..9af386e 100644 --- a/odd_collector_aws/adapters/sagemaker/domain/__init__.py +++ b/odd_collector_aws/adapters/sagemaker/domain/__init__.py @@ -1,11 +1,7 @@ -from odd_collector_aws.adapters.sagemaker.domain.artifact import Artifact -from odd_collector_aws.adapters.sagemaker.domain.artifact import Association - - -from odd_collector_aws.adapters.sagemaker.domain.trial import Trial -from odd_collector_aws.adapters.sagemaker.domain.trial_component import TrialComponent - -from odd_collector_aws.adapters.sagemaker.domain.experiment import Experiment +from odd_collector_aws.adapters.sagemaker.domain.artifact import Artifact, Association from odd_collector_aws.adapters.sagemaker.domain.base_sagemaker_entity import ( BaseSagemakerEntity, ) +from odd_collector_aws.adapters.sagemaker.domain.experiment import Experiment +from odd_collector_aws.adapters.sagemaker.domain.trial import Trial +from odd_collector_aws.adapters.sagemaker.domain.trial_component import TrialComponent diff --git a/odd_collector_aws/adapters/sagemaker_featurestore/adapter.py b/odd_collector_aws/adapters/sagemaker_featurestore/adapter.py index f42d1b0..867b27d 100644 --- a/odd_collector_aws/adapters/sagemaker_featurestore/adapter.py +++ b/odd_collector_aws/adapters/sagemaker_featurestore/adapter.py @@ -2,11 +2,10 @@ import boto3 import pytz -from odd_models.models import DataEntity, DataEntityType, DataSet, List -from odd_models.models import DataEntityList +from odd_collector_sdk.domain.adapter import AbstractAdapter +from odd_models.models import DataEntity, DataEntityList, DataEntityType, DataSet, List from odd_collector_aws.domain.plugin import SagemakerFeaturestorePlugin -from odd_collector_sdk.domain.adapter import AbstractAdapter from .mappers.datasets import DatasetMapper from .mappers.metadata import metadata_extractor diff --git a/odd_collector_aws/adapters/sagemaker_featurestore/mappers/metadata.py b/odd_collector_aws/adapters/sagemaker_featurestore/mappers/metadata.py index 361c433..6ba94b9 100644 --- a/odd_collector_aws/adapters/sagemaker_featurestore/mappers/metadata.py +++ b/odd_collector_aws/adapters/sagemaker_featurestore/mappers/metadata.py @@ -1,4 +1,4 @@ -from typing import Any, Dict, Set, Callable, List +from typing import Any, Callable, Dict, List, Set from humps import decamelize from odd_models.models import MetadataExtension diff --git a/odd_collector_aws/adapters/sqs/adapter.py b/odd_collector_aws/adapters/sqs/adapter.py index dc852eb..f41a823 100644 --- a/odd_collector_aws/adapters/sqs/adapter.py +++ b/odd_collector_aws/adapters/sqs/adapter.py @@ -1,13 +1,16 @@ +import datetime from cmath import log +from typing import Any, Dict, List + import boto3 +import pytz from botocore.exceptions import ClientError -from .sqs_generator import SqsGenerator -from odd_models.models import DataEntityList, DataEntity, DataEntityType from odd_collector_sdk.domain.adapter import AbstractAdapter -from typing import Any, Dict, List +from odd_models.models import DataEntity, DataEntityList, DataEntityType + from odd_collector_aws.domain.plugin import SQSPlugin -import datetime -import pytz + +from .sqs_generator import SqsGenerator SCHEMA_FILE_URL = ( "https://raw.githubusercontent.com/opendatadiscovery/opendatadiscovery-specification/" diff --git a/odd_collector_aws/domain/fetch_paginator.py b/odd_collector_aws/domain/fetch_paginator.py index add26e5..1bc9d5d 100644 --- a/odd_collector_aws/domain/fetch_paginator.py +++ b/odd_collector_aws/domain/fetch_paginator.py @@ -1,7 +1,9 @@ -from .paginator_config import PaginatorConfig from typing import Iterable + from botocore.client import BaseClient +from .paginator_config import PaginatorConfig + def fetch_paginator(conf: PaginatorConfig, client: BaseClient) -> Iterable: paginator = client.get_paginator(operation_name=conf.op_name) @@ -14,8 +16,8 @@ def fetch_paginator(conf: PaginatorConfig, client: BaseClient) -> Iterable: ) for entity in sdk_response.build_full_result()[conf.list_fetch_key]: - yield entity if conf.mapper is None else conf.mapper( - entity, conf.mapper_args + yield ( + entity if conf.mapper is None else conf.mapper(entity, conf.mapper_args) ) if sdk_response.resume_token is None: diff --git a/odd_collector_aws/domain/paginator_config.py b/odd_collector_aws/domain/paginator_config.py index bfb6a9c..e50e918 100644 --- a/odd_collector_aws/domain/paginator_config.py +++ b/odd_collector_aws/domain/paginator_config.py @@ -1,4 +1,4 @@ -from typing import Dict, Union, Callable, Any, Optional +from typing import Any, Callable, Dict, Optional, Union from pydantic import BaseModel, Field diff --git a/odd_collector_aws/domain/plugin.py b/odd_collector_aws/domain/plugin.py index 99e58e0..7c94efc 100644 --- a/odd_collector_aws/domain/plugin.py +++ b/odd_collector_aws/domain/plugin.py @@ -1,7 +1,8 @@ -from typing import List, Literal, Optional +from typing import Any, List, Literal, Optional from odd_collector_sdk.domain.plugin import Plugin from odd_collector_sdk.types import PluginFactory +from pydantic import BaseModel, Field from odd_collector_aws.domain.dataset_config import DatasetConfig @@ -36,6 +37,27 @@ class SQSPlugin(AwsPlugin): type: Literal["sqs"] +class DeltaTableConfig(BaseModel): + scheme: str = Field(default="s3", alias="schema") + bucket: str + prefix: str + + @property + def path(self) -> str: + return f"{self.scheme}://{self.bucket}/{self.prefix.strip('/')}" + + +class S3DeltaPlugin(AwsPlugin): + type: Literal["s3_delta"] + aws_secret_access_key: Optional[str] + aws_access_key_id: Optional[str] + aws_region: Optional[str] + aws_session_token: Optional[str] + endpoint_url: Optional[str] + aws_storage_allow_http: Optional[bool] = False + delta_tables: list[DeltaTableConfig] + + class S3Plugin(AwsPlugin): type: Literal["s3"] aws_secret_access_key: Optional[str] @@ -81,4 +103,5 @@ class KinesisPlugin(AwsPlugin): "sagemaker_featurestore": SagemakerFeaturestorePlugin, "sagemaker": SagemakerPlugin, "sqs": SQSPlugin, + "s3_delta": S3DeltaPlugin, } diff --git a/odd_collector_aws/utils/__init__.py b/odd_collector_aws/utils/__init__.py index af1d19b..cbc9da7 100644 --- a/odd_collector_aws/utils/__init__.py +++ b/odd_collector_aws/utils/__init__.py @@ -1,5 +1,5 @@ +from .create_generator import create_generator from .flat_list_get import safe_list_get from .flatdict import flatdict from .get_file_extension import get_file_extension from .parse_s3_url import parse_s3_url -from .create_generator import create_generator diff --git a/odd_collector_aws/utils/create_generator.py b/odd_collector_aws/utils/create_generator.py index 7ec8261..8762e11 100644 --- a/odd_collector_aws/utils/create_generator.py +++ b/odd_collector_aws/utils/create_generator.py @@ -4,7 +4,7 @@ from botocore.exceptions import ClientError from oddrn_generator import Generator -from oddrn_generator.generators import S3Generator +from oddrn_generator.generators import S3CustomGenerator, S3Generator from odd_collector_aws.aws.aws_client import AwsClient from odd_collector_aws.domain.plugin import AwsPlugin @@ -17,12 +17,13 @@ def create_generator(generator_cls: Type[T], aws_plugin: AwsPlugin) -> T: aws_client = AwsClient(aws_plugin) - region = aws_plugin.aws_region - account_id = aws_plugin.aws_account_id - if generator_cls == S3Generator: + if aws_plugin.endpoint_url: + return S3CustomGenerator(endpoint=aws_plugin.endpoint_url) + return generator_cls() + account_id = aws_plugin.aws_account_id if account_id is None: try: account_id = aws_client.get_account_id() @@ -30,8 +31,6 @@ def create_generator(generator_cls: Type[T], aws_plugin: AwsPlugin) -> T: logging.debug(e) raise AccountIdError from e - if generator_cls != S3Generator or not aws_plugin.endpoint_url: - return generator_cls(cloud_settings={"region": region, "account": account_id}) - - endpoint_url = urlparse(aws_plugin.endpoint_url).hostname - return S3CompatibleGenerator(host_settings=endpoint_url) + return generator_cls( + cloud_settings={"region": aws_plugin.aws_region, "account": account_id} + ) diff --git a/odd_collector_aws/utils/flat_list_get.py b/odd_collector_aws/utils/flat_list_get.py index a374530..abcaf76 100644 --- a/odd_collector_aws/utils/flat_list_get.py +++ b/odd_collector_aws/utils/flat_list_get.py @@ -1,4 +1,4 @@ -from typing import Optional, TypeVar, List +from typing import List, Optional, TypeVar T = TypeVar("T") diff --git a/poetry.lock b/poetry.lock index fa1d194..f35ee9d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,17 +2,106 @@ [[package]] name = "aiohttp" -version = "3.8.3" +version = "3.8.4" description = "Async http client/server framework (asyncio)" category = "main" optional = false python-versions = 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[tool.poetry.dependencies] python = "^3.9" -oddrn-generator = "0.1.77" +oddrn-generator = "^0.1.80" python-dotenv = "0.19.0" boto3 = "1.18.44" pyhumps = "3.0.2" -pyarrow = "6.0.1" +pyarrow = "^10.0.1" humps = "0.2.2" flatdict = "4.0.1" odd-collector-sdk = "^0.3.27" lark-parser = "^0.12.0" +deltalake = "^0.9.0" [tool.poetry.group.dev.dependencies] black = "^23.1.0" diff --git a/tests/utils/get_dataset_class.py b/tests/utils/get_dataset_class.py index 5eb3e10..c16653e 100644 --- a/tests/utils/get_dataset_class.py +++ b/tests/utils/get_dataset_class.py @@ -1,21 +1,51 @@ -from odd_collector_aws.adapters.s3.domain.dataset import get_dataset_class -from odd_collector_aws.adapters.s3.domain.dataset import CSVS3Dataset, TSVS3Dataset, ParquetS3Dataset +from odd_collector_aws.adapters.s3.domain.dataset import ( + CSVS3Dataset, + ParquetS3Dataset, + TSVS3Dataset, + get_dataset_class, +) def test_get_dataset_class(): assert get_dataset_class("file.with.dots.in.name.csv") == CSVS3Dataset assert get_dataset_class("file.with.dots.in.name.csv.gz") == CSVS3Dataset assert get_dataset_class("file.with.dots.in.name.csv.bz2") == CSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.csv") == CSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.csv.gz") == CSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.csv.bz2") == CSVS3Dataset + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.csv") + == CSVS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.csv.gz") + == CSVS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.csv.bz2") + == CSVS3Dataset + ) assert get_dataset_class("file.with.dots.in.name.tsv") == TSVS3Dataset assert get_dataset_class("file.with.dots.in.name.tsv.gz") == TSVS3Dataset assert get_dataset_class("file.with.dots.in.name.tsv.bz2") == TSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv") == TSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv.gz") == TSVS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv.bz2") == TSVS3Dataset + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv") + == TSVS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv.gz") + == TSVS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.tsv.bz2") + == TSVS3Dataset + ) assert get_dataset_class("file.with.dots.in.name.parquet") == ParquetS3Dataset - assert get_dataset_class("file.with.dots.in.name.snappy.parquet") == ParquetS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.parquet") == ParquetS3Dataset - assert get_dataset_class("very/long/path/to/file.with.dots.in.name.snappy.parquet") == ParquetS3Dataset + assert ( + get_dataset_class("file.with.dots.in.name.snappy.parquet") == ParquetS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.parquet") + == ParquetS3Dataset + ) + assert ( + get_dataset_class("very/long/path/to/file.with.dots.in.name.snappy.parquet") + == ParquetS3Dataset + )