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XPO terms using obsolete GO classes #166

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seger opened this issue May 3, 2024 · 0 comments
Open

XPO terms using obsolete GO classes #166

seger opened this issue May 3, 2024 · 0 comments
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seger commented May 3, 2024

XPO: abnormal carbon dioxide homeostasis XPO_0141738
GO: obsolete carbon dioxide homeostasis GO_1903171
Replaced by: respiratory chemosensitivity GO_0160061

XPO: abnormal cellular hormone metabolic process XPO_0141784
GO: obsolete cellular hormone metabolic process GO_0034754
Replaced by: hormone metabolic process GO_0042445

XPO: abnormal chemical homeostasis within a tissue XPO_0141743
GO: obsolete chemical homeostasis within a tissue GO_0048875
No replacement or consider term

XPO: abnormal creatinine homeostasis XPO_0141745
GO: obsolete creatinine homeostasis GO_0097273
Consider: renal system process GO_0003014

XPO: abnormal gas homeostasis XPO_0141748
GO: obsolete gas homeostasis GO_0033483
No replacement or consider term

XPO: abnormal histone methylation XPO_0131716
GO: obsolete histone methylation GO_0016571
Changed from GOBP to GOMF: histone methyltransferase activity GO_0042054

XPO: abnormal pathway-restricted SMAD protein phosphorylation XPO_0131723
GO: obsolete pathway-restricted SMAD protein phosphorylation GO_0060389
Consider: protein kinase activity GO_0004672
Consider: positive regulation of SMAD protein signal transduction GO_0060391
Consider: SMAD protein signal transduction GO_0060395

XPO: abnormal phosphorylation of RNA polymerase II C-terminal domain XPO_0131725
GO: obsolete phosphorylation of RNA polymerase II C-terminal domain GO_0070816
Consider: RNA polymerase II CTD heptapeptide repeat kinase activity GO_0008353

XPO: abnormal urate homeostasis XPO_0141770
GO: obsolete urate homeostasis GO_1903118
Consider: renal system process GO_0003014

XPO: abnormal urea homeostasis XPO_0141771
GO: obsolete urea homeostasis GO_0097274
Consider: renal system process GO_0003014

XPO: abnormal water homeostasis XPO_0141772
GO: obsolete water homeostasis GO_0030104
Consider: renal water homeostasis GO_0003091
Consider: intracellular water homeostasis GO_0009992
Consider: multicellular organismal-level water homeostasis GO_0050891

@seger seger self-assigned this May 3, 2024
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