From 48aea9d2a8c770839bbc9408dbb5c5ddd3ea58a8 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Mon, 8 Dec 2014 14:22:39 -0800 Subject: [PATCH] removed fake IAO property. Issue #1 --- src/ontology/caro.owl | 514 +++++++++++++++++++++--------------------- 1 file changed, 255 insertions(+), 259 deletions(-) diff --git a/src/ontology/caro.owl b/src/ontology/caro.owl index 1b3d222..e83020f 100644 --- a/src/ontology/caro.owl +++ b/src/ontology/caro.owl @@ -8,19 +8,19 @@ Prefix(rdfs:=) Ontology( Import() Import() -Import() -Import() Import() +Import() +Import() Import() -Import() Import() +Import() Annotation( ""^^xsd:string) Annotation(owl:versionInfo "2012-07-25"^^xsd:string) Declaration(Class()) AnnotationAssertion( "CARO:0000000"^^xsd:string) -AnnotationAssertion(Annotation( "CAROC:Brownsville2014") "A part of a multicellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or a substance produced by a multicellular organism with granularity above the level of a protein complex."^^xsd:string) AnnotationAssertion(rdfs:comment "Following BFO, material anatomical entities may have immaterial parts (the lumen of your stomach is part of your stomach). The granularity limit follows the limits set by the Gene Ontology on the granularity limit for GO:cellular_component.") +AnnotationAssertion(Annotation( "CAROC:Brownsville2014") "A part of a multicellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex. Or a substance produced by a multicellular organism with granularity above the level of a protein complex."^^xsd:string) AnnotationAssertion(rdfs:label "anatomical entity"^^xsd:string) SubClassOf( ) DisjointUnion( ) @@ -480,11 +480,9 @@ SubClassOf( ObjectSomeValuesFrom()) AnnotationAssertion(rdfs:label "epidermis") AnnotationAssertion( "Epithelium of the integumentary system.") -AnnotationAssertion( "epidermis"@en) EquivalentClasses( ObjectIntersectionOf(ObjectSomeValuesFrom( ) )) Declaration(Class()) AnnotationAssertion(rdfs:label "integumentary system") -AnnotationAssertion( "integumentary system"@en) AnnotationAssertion( "Connected anatomical system that forms a barrier between an animal and its environment - generally consisting of an epidermis, which may be covered by some acellular structure.") SubClassOf( ) Declaration(Class()) @@ -570,7 +568,6 @@ AnnotationAssertion( "cellular organism"^^xsd:string) AnnotationAssertion( "CARO:0010004"^^xsd:string) AnnotationAssertion(rdfs:comment "A general term for organism that is agnostic about single cell vs multi-cellular. Note that this is a subclass of 'anatomical structure', meaning that an organism must be a connected structure. So, if I take one plant and make a rooted cutting from a it, I now have two (clonally related) organisms. "^^xsd:string) -AnnotationAssertion( "organism"@en) SubClassOf( ) SubClassOf( ) Declaration(Class()) @@ -678,7 +675,6 @@ Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) AnnotationAssertion(rdfs:label "expand expression to"^^xsd:string) -Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) AnnotationAssertion(rdfs:label "term replaced by"^^xsd:string) @@ -734,26 +730,26 @@ AnnotationAssertion(rdfs:label ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion( "FBbt:00000663"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00000663"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0134726"^^xsd:string) "Larval neurosecretory neuron whose soma is located in the cortex of the antero-dorsal region of the lateral protocerebrum and whose axon innervates the corpora allatum. This axon runs caudally on a slightly curved path from to the nervus corporis cardiaci (NCC). It emerges from the NCC at the ring gland and passes the copora cardiaca and the lateral limb of the prothoracic gland before innervating the corpora allatum. There is only one bilaterally symmetric pair of these cells per animal."^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0134726"^^xsd:string) "Larval neurosecretory neuron whose soma is located in the cortex of the antero-dorsal region of the lateral protocerebrum and whose axon innervates the corpora allatum. This axon runs caudally on a slightly curved path from to the nervus corporis cardiaci (NCC). It emerges from the NCC at the ring gland and passes the copora cardiaca and the lateral limb of the prothoracic gland before innervating the corpora allatum. There is only one bilaterally symmetric pair of these cells per animal."^^xsd:string) AnnotationAssertion( "FBbt:00004715"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00005687"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0042883"^^xsd:string) "MXN"^^xsd:string) AnnotationAssertion( "2008-11-06T02:12:48Z"^^xsd:string) AnnotationAssertion( "2011-01-12T02:59:20Z"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) Annotation( "FlyBase:FBrf0034075"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "VFB:FBbt_00003913"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) Annotation( "FlyBase:FBrf0034075"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) @@ -763,50 +759,50 @@ AnnotationAssertion( "djs93"^^xsd:string) AnnotationAssertion( "2008-11-03T06:37:01Z"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10178"^^xsd:string) "Y1"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "lobula layer Lo4"^^xsd:string) -AnnotationAssertion( "peduncle"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "peduncle"^^xsd:string) AnnotationAssertion( "FBbt:00005570"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "VFB:FBbt_00007446"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "T1 LA"^^xsd:string) +AnnotationAssertion( "VFB:FBbt_00007446"^^xsd:string) AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "T1 LA"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "ventrolateral serotonin neuron"^^xsd:string) -AnnotationAssertion( "FBbt:00004345"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00004345"^^xsd:string) AnnotationAssertion( "postEndoP2"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "CL:0000372"^^xsd:string) -AnnotationAssertion( "FBbt:00004163"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00004163"^^xsd:string) +AnnotationAssertion( "CL:0000372"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0151928"^^xsd:string) "vmd1"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion( "FBbt:00002805"^^xsd:string) -AnnotationAssertion( "FBbt:00110048"^^xsd:string) AnnotationAssertion( "ligaments"^^xsd:string) +AnnotationAssertion( "FBbt:00110048"^^xsd:string) +AnnotationAssertion( "FBbt:00002805"^^xsd:string) +AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion( "prothoracic leg gustatory bristle"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002201"^^xsd:string) -AnnotationAssertion( "82a"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "82a"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00001123"^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10461"^^xsd:string) "MB-V1"^^xsd:string) +AnnotationAssertion( "FBbt:00001123"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion( "FBbt:00001838"^^xsd:string) -AnnotationAssertion( "FBbt:00004994"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00057172"^^xsd:string) +AnnotationAssertion( "FBbt:00004994"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0107836"^^xsd:string) "Ventro-anterior glomerulus of the adult antennal lobe. It is composed of two compartments which together lie dorsal to glomerulus VA3, and dorsomedial to glomerulus VA5."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) @@ -818,25 +814,25 @@ AnnotationAssertion( "FlyBase:FBrf0098344"^^xsd:string) "Neuroblast located at the embryonic segment border close to the tracheal pit and produces both neurons and glial cells (Schmidt et al., 1997)."^^xsd:string) AnnotationAssertion(rdfs:comment "Naming of sensilla is based on figure 2(b) of Hiroi et al., (2002). It corresponds to sensilla I3 in Weiss et al., (2011). Note that both Shanbhag et al., (2001) and Hiroi et al., (2002) claim there are between 9 and 10 I-type sensilla present."^^xsd:string) AnnotationAssertion(Annotation( "FBC:ds555"^^xsd:string) "P2 TrMes"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "2009-08-12T04:30:28Z"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FBC:ds555"^^xsd:string) "A ProvI"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "acidos grasos"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "david"^^xsd:string) -AnnotationAssertion( "FBbt:00002574"^^xsd:string) AnnotationAssertion( "FBbt:00000611"^^xsd:string) +AnnotationAssertion( "FBbt:00002574"^^xsd:string) AnnotationAssertion( "FBbt:00100652"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0179238"^^xsd:string) "ORN ab4A"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00001767"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0212061"^^xsd:string) "INP"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0212061"^^xsd:string) "INP"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00003622"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) @@ -848,11 +844,11 @@ AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00007260"^^xsd:string) AnnotationAssertion( "FBbt:00004751"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "antennomaxillary complex"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0179238"^^xsd:string) Annotation( "FlyBase:FBrf0187305"^^xsd:string) "Bilateral olfactory receptor neuron (ORN) that expresses Or67c (FBgn0036078). Its axon branches, with one branch innervating the ipsilateral antennal lobe glomerulus VC4 and the other fasciculating with the antennal commissure and innervating the contralateral antennal lobe glomerulus VC4. Its dendrite transduces signals from antennal basiconic sensillum ab7."^^xsd:string) -AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "SFA"^^xsd:string) AnnotationAssertion( "FlyBrain_NDB:10435"^^xsd:string) +AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "SFA"^^xsd:string) AnnotationAssertion( "DG5"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0049409"^^xsd:string) "segment C of fan-shaped body"^^xsd:string) AnnotationAssertion( "2010-11-02T04:58:18Z"^^xsd:string) @@ -864,68 +860,68 @@ AnnotationAssertion(Annotation( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0048551"^^xsd:string) "T neuron"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0074012"^^xsd:string) Annotation( "FlyBase:FBrf0167539"^^xsd:string) Annotation( "FlyBase:FBrf0208984"^^xsd:string) "Most posterior of the two dorsal cibarial sensilla (Montell, 2009). Innervated by three gustatory receptors (Gendre et al, 2004)."^^xsd:string) -AnnotationAssertion( "FBbt:00100647"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00100647"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0074012"^^xsd:string) Annotation( "FlyBase:FBrf0167539"^^xsd:string) Annotation( "FlyBase:FBrf0208984"^^xsd:string) "Most posterior of the two dorsal cibarial sensilla (Montell, 2009). Innervated by three gustatory receptors (Gendre et al, 2004)."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00007396"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0213690"^^xsd:string) "vGlutTmnew1"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0213690"^^xsd:string) "vGlutTmnew1"^^xsd:string) AnnotationAssertion( "premandibular sulcus"^^xsd:string) AnnotationAssertion(rdfs:comment "The neurotransmitter was assessed by co-labelling cells with a Cha-GAL4.7.4 driver [FBtp0014830] and an anti-ChAT antibody (Varija Raghu et al., 2011). Pre- versus postsynaptic innervation judged by scoring of terminal morphology from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB."^^xsd:string) AnnotationAssertion(Annotation( "FBC:SPR"^^xsd:string) "Hair plate found on the coxa of the adult mesothoracic leg."^^xsd:string) -AnnotationAssertion( "2011-12-15T10:03:31Z"^^xsd:string) AnnotationAssertion( "FBbt:00004603"^^xsd:string) +AnnotationAssertion( "2011-12-15T10:03:31Z"^^xsd:string) AnnotationAssertion( "FBbt:00040016"^^xsd:string) AnnotationAssertion( "FBbt:00004094"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0045359"^^xsd:string) Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSdescription0.html"^^xsd:string) "Sensory PNS neuron of embryonic/larval abdominal segments 1-7, the pro-, meta- or mesothoracic segments (Dambly-Chaudiere and Ghysen, 1986). In the abdominal segments it is located dorsal to vesC, and ventral to v'esB. In the thoracic segments 2 and 3 it is located ventral to the cluster of vesA-E neurons, but is located anterior to it in thoracic segment T1."^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "2009-06-24T07:24:30Z"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "VPM1"^^xsd:string) AnnotationAssertion( "FBbt:00002626"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "VPM1"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00002395"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "recurrent nerve"^^xsd:string) +AnnotationAssertion( "FBbt:00002395"^^xsd:string) AnnotationAssertion(rdfs:comment "Naming of sensilla is based on figure 2(b) of Hiroi et al., (2002). It corresponds to sensilla I2 in Weiss et al., (2011). Note that both Shanbhag et al., (2001) and Hiroi et al., (2002) claim there are between 9 and 10 I-type sensilla present."^^xsd:string) AnnotationAssertion( "embryonic proventriculus"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "cations"^^xsd:string) -AnnotationAssertion( "FBbt:00005358"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) +AnnotationAssertion( "FBbt:00005358"^^xsd:string) +AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "cations"^^xsd:string) AnnotationAssertion( "FBbt:10000445"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "2011-11-23T01:13:06Z"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0107836"^^xsd:string) "Dorso-medial glomerulus of the adult antennal lobe. It lies immediately ventral to glomerulus DM1 in the posterior most strata of the antennal lobe."^^xsd:string) AnnotationAssertion(rdfs:comment "That this bristle is mechanosensory is primarily based on the presence of a characteristic microtubular body present in the single innervating neuron (Palka et al., 1979)."^^xsd:string) -AnnotationAssertion( "FBbt:00000026"^^xsd:string) AnnotationAssertion( "T2 lateral black dot"^^xsd:string) -AnnotationAssertion( "b1mn"^^xsd:string) +AnnotationAssertion( "FBbt:00000026"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "b1mn"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0211729"^^xsd:string) Annotation( "doi:10.1371/journal.pbio.1000461.g004"^^xsd:string) "Antennal lobe projection neuron from the ad neuroblast lineage (embryonic born) whose dendrites innervate only antennal lobe glomerulus DL4. Neurons of this class are born during the 20th and final division of the antero-dorsal antennal lobe neuroblast during embryogenesis (Yu et al., 2010)."^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0212834"^^xsd:string) "I-type sensilla I0"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0212834"^^xsd:string) "I-type sensilla I0"^^xsd:string) AnnotationAssertion( "FBbt:00100445"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00001366"^^xsd:string) AnnotationAssertion( "FBbt:00005553"^^xsd:string) -AnnotationAssertion( "VFB:FBbt_00040039"^^xsd:string) +AnnotationAssertion( "FBbt:00001366"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "VFB:FBbt_00040039"^^xsd:string) AnnotationAssertion( "FBbt:00000839"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "djs93"^^xsd:string) AnnotationAssertion( "FBbt:00003667"^^xsd:string) -AnnotationAssertion( "FBbt:00100600"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00100600"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00100672"^^xsd:string) AnnotationAssertion( "FBbt:00003955"^^xsd:string) @@ -938,14 +934,14 @@ AnnotationAssertion( "djs93"^^xsd:string) AnnotationAssertion(Annotation( "KEGG COMPOUND:"^^xsd:string) "4-(2-Aminoethyl)benzene-1,2-diol"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00003694"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00003694"^^xsd:string) AnnotationAssertion( "FBbt:00005114"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00005051"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00001731"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00001731"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "lobular columnar neuron Lcn1"^^xsd:string) @@ -1151,13 +1147,13 @@ AnnotationAssertion( "FlyBase:FBrf0141649"^^xsd:string) "I-3"^^xsd:string) AnnotationAssertion(Annotation( "answers.com:http://www.answers.com/"^^xsd:string) "A structural quality inhering in a bearer by virtue of whether the bearer forms a bundle of anatomical fibers, as of muscle or nerve."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00006038"^^xsd:string) AnnotationAssertion( "FlyBrain_NDB:10249"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) Annotation( "FlyBase:FBrf0054529"^^xsd:string) "A lamina monopolar neuron that arborizes in the proximal lamina, forms a spreading arbor in medulla layer M2 and a small terminal arbor in M5 that penetrates adjacent columns (Fischbach and Dittrich, 1989; Takemura et al., 2008). In the proximal lamina it receives synaptic input from outer photoreceptor (R1-6) axons and forms reciprocal synapses with lamina monopolar neuron L2 within the same column and, via collaterals, with L2s in adjacent columns (Meinertzhagen and O'Neil, 1991). In the medulla it has presynaptic terminals in both M2 and M5 (Takemura et al., 2008)."^^xsd:string) AnnotationAssertion( "FBbt:00005651"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) Annotation( "FlyBase:FBrf0054529"^^xsd:string) "A lamina monopolar neuron that arborizes in the proximal lamina, forms a spreading arbor in medulla layer M2 and a small terminal arbor in M5 that penetrates adjacent columns (Fischbach and Dittrich, 1989; Takemura et al., 2008). In the proximal lamina it receives synaptic input from outer photoreceptor (R1-6) axons and forms reciprocal synapses with lamina monopolar neuron L2 within the same column and, via collaterals, with L2s in adjacent columns (Meinertzhagen and O'Neil, 1991). In the medulla it has presynaptic terminals in both M2 and M5 (Takemura et al., 2008)."^^xsd:string) AnnotationAssertion( "odorant receptor neuron Or49a"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) @@ -1169,23 +1165,23 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion( "FBbt:00001699"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0031012"^^xsd:string) "Tubular system of the embryo/larva through which hemolymph flows."^^xsd:string) AnnotationAssertion( "FBbt:00004760"^^xsd:string) -AnnotationAssertion( "hypopharynx specific anlage"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(rdfs:comment "Made obsolete because of redundancy with GO cell component term. Please use: striated muscle thin filament ; GO:0005865 . ds060616."^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "hypopharynx specific anlage"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0123036"^^xsd:string) "An acellular anatomical structure at the posterior pole of the eggshell that is postulated to act in respiration. It consists of the imprints of 6-15 small central cells surrounded by the imprints of 10-15 peripheral cells, which can be distinguished from the larger imprints of the main body follicle cells."^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0090460"^^xsd:string) "Interneuron originating from the neuroblast NB4-2 lineage. These project contralaterally via the anterior commissure."^^xsd:string) AnnotationAssertion( "FBbt:00100233"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0090460"^^xsd:string) "Interneuron originating from the neuroblast NB4-2 lineage. These project contralaterally via the anterior commissure."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0123036"^^xsd:string) "An acellular anatomical structure at the posterior pole of the eggshell that is postulated to act in respiration. It consists of the imprints of 6-15 small central cells surrounded by the imprints of 10-15 peripheral cells, which can be distinguished from the larger imprints of the main body follicle cells."^^xsd:string) AnnotationAssertion( "protocerebral posteriomedial dopaminergic cluster 3 neuron"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0082171"^^xsd:string) "A-subperineurial glial cell located in thoracic segment 3."^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0082171"^^xsd:string) "A-subperineurial glial cell located in thoracic segment 3."^^xsd:string) AnnotationAssertion( "FBbt:00003402"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "vertical plate"^^xsd:string) AnnotationAssertion( "FBbt:00100725"^^xsd:string) +AnnotationAssertion( "vertical plate"^^xsd:string) AnnotationAssertion( "FBbt:00003576"^^xsd:string) AnnotationAssertion( "FBbt:00000177"^^xsd:string) AnnotationAssertion( ) @@ -1193,31 +1189,31 @@ AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) Annotation( "FlyBase:FBrf0064793"^^xsd:string) "An indirect flight muscle that functions as a wing depressor. The six pairs of dorsal medial muscles function to depress the wings by longitudinal arching of the scutum (Miller, 1950)."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0058826"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "Apodeme located at the boundary between two abdominal segments."^^xsd:string) AnnotationAssertion( "ocellus photoreceptor"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10174"^^xsd:string) "TmY5a"^^xsd:string) AnnotationAssertion( "a7"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00007329"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0194812"^^xsd:string) "main trunk"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00007329"^^xsd:string) AnnotationAssertion( "FBbt:00005059"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0152101"^^xsd:string) Annotation( "FlyBase:FBrf0195358"^^xsd:string) "Posteriorly located member of the Period-expressing DN1 cluster that expresses glass (FBgn0004618). There are 14-17 DN1p cells per cluster. Many, perhaps all cells in this cluster project through the dorsal fusion commissure (Helfrich-Forster et al., 2007)."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0194812"^^xsd:string) "main trunk"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0152101"^^xsd:string) Annotation( "FlyBase:FBrf0195358"^^xsd:string) "Posteriorly located member of the Period-expressing DN1 cluster that expresses glass (FBgn0004618). There are 14-17 DN1p cells per cluster. Many, perhaps all cells in this cluster project through the dorsal fusion commissure (Helfrich-Forster et al., 2007)."^^xsd:string) AnnotationAssertion( "FBbt:00000367"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00003718"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0194268"^^xsd:string) Annotation( "FlyBase:FBrf0212841"^^xsd:string) "Neuron developing from the DPLp2 neuroblast."^^xsd:string) AnnotationAssertion( "ectodermal derivative"^^xsd:string) -AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) "A lobula tangential neuron that branches extensively as it enters the lobula in layer 6, with each branch forming a fine, bushy arbor. Together, these arbors cover the whole width of layer 6."^^xsd:string) +AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion( "oesophagus primordium"^^xsd:string) AnnotationAssertion( "dTR"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "larval somatic muscle"^^xsd:string) AnnotationAssertion( "FBbt:00001918"^^xsd:string) +AnnotationAssertion( "larval somatic muscle"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "ganglion mother cell GMC 7-1b"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0206543"^^xsd:string) Annotation( "PMID:20109517"^^xsd:string) "Small, oblong-shaped glial cell that is part of the (outer) perineurial sheath layer on the surface of the adult brain. It is located on top of the basal glial cell layer that is composed of the subperineurial glial cells."^^xsd:string) @@ -1231,27 +1227,27 @@ AnnotationAssertion(Annotation( "FBbt:00005931"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0054242"^^xsd:string) Annotation( "FlyBase:FBrf0057603"^^xsd:string) Annotation( "FlyBase:FBrf0082171"^^xsd:string) "A large subperineural glial cell that lies anterior to the anterior segment border and anterior commissure and medial to the longitudinal connective in each abdominal and thoracic neuromere, (Klambt and Goodman, 1991; Ito et al., 1995). It sends a process to the dorsoventral channel (Ito et al., 1995)."^^xsd:string) AnnotationAssertion( "FBbt:00004598"^^xsd:string) -AnnotationAssertion( "FBbt:00003777"^^xsd:string) AnnotationAssertion( "FBbt:00110013"^^xsd:string) +AnnotationAssertion( "FBbt:00003777"^^xsd:string) AnnotationAssertion( "larval antennal lobe glomerulus 1a"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "CARO:MAH"^^xsd:string) Annotation( "FBC:DOS"^^xsd:string) "Material anatomical entity that has inherent 3D shape, whose parts are all connected and that is generated by coordinated expression of the organism's own genome."^^xsd:string) -AnnotationAssertion( "FBbt:00007535"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0049409"^^xsd:string) "Median fan-shaped neuron Fm whose perikarya lie in a dorso-caudal cluster near to the mushroom body calyx and have a domain of spiny fibers in the dorso-medial protocerebrum."^^xsd:string) +AnnotationAssertion( "FBbt:00007535"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "A collective term for stages 9-12."^^xsd:string) AnnotationAssertion( "FBbt:00100187"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( "larval midgut"^^xsd:string) AnnotationAssertion( "posteriorlateral protocerebrum"^^xsd:string) @@ -1259,66 +1255,66 @@ AnnotationAssertion( "FBbt:00003956"^^xsd:string) AnnotationAssertion( "FBbt:00001741"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0167997"^^xsd:string) "HANC"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "2011-04-15T01:40:49Z"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "2011-04-15T01:40:49Z"^^xsd:string) AnnotationAssertion( "FBbt:00004614"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "DEPRECATION WARNING"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "VFB:FBbt_00100347"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00100317"^^xsd:string) AnnotationAssertion( "mmc46"^^xsd:string) -AnnotationAssertion( "FBbt:00003467"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0205814"^^xsd:string) "A local interneuron of the adult antennal lobe that is derived from the lateral antennal lobe neuroblast and whose terminal arbors form glomerular shapes. Many of these neurons are oligo-glomerular - making connections with only subsets of glomeruli."^^xsd:string) +AnnotationAssertion( "FBbt:00003467"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0082171"^^xsd:string) "Surface-associated, subperineurial glial cell located on the ventral surface of the embryonic/larval ventral nerve cord. It lies between the intersegmental nerve roots, at 30-60% along the medio-lateral axis, slightly antero-lateral to the medial intersegmental nerve root glial cell."^^xsd:string) AnnotationAssertion( "FBbt:00067036"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion(Annotation( "PMID:21438012"^^xsd:string) "Segmental nerve root glial cell located along the longitudinal axis of the segmental nerve. There are two cells in this class that lie in tandem covering several branches of the nerve root and, unlike the medial intersegmental nerve glial cells, are slightly detached from the neuropil proper."^^xsd:string) -AnnotationAssertion( "FBbt:00004419"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00004419"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "The only lateral longitudinal muscle in each of embryonic/larval abdominal segments 1-7."^^xsd:string) -AnnotationAssertion( "FBbt:00004502"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A6 VA2"^^xsd:string) +AnnotationAssertion( "FBbt:00004502"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0191451"^^xsd:string) "OSN"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0090460"^^xsd:string) "Interneuron that develops from neuroblast NB3-1 of the thorax. The projections of these interneurons form a fascicle that projects through the anterior commissure. Unlike the fascicle formed by abdominal 3-1I, it does not show any appreciable bifurcation in the contralateral connective."^^xsd:string) AnnotationAssertion( "FBbt:00005226"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(rdfs:comment "Hanesch et al., (1989) define 8 segments (A-H), 4 per hemisphere, that correspond to the segment pairs (groups) defined by BrainName and used here. Segment group Y corresponds to C and F in Hanesch's nomenclature."^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "BH-"^^xsd:string) -AnnotationAssertion( "cerebral cortex"^^xsd:string) -AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) -AnnotationAssertion( "subesophageal ganglion neuron 3"^^xsd:string) +AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "."^^xsd:string) +AnnotationAssertion( "cerebral cortex"^^xsd:string) AnnotationAssertion( "antennal glomerulus VC1"^^xsd:string) +AnnotationAssertion( "subesophageal ganglion neuron 3"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0007734"^^xsd:string) "postvertical seta"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00000417"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00007497"^^xsd:string) +AnnotationAssertion( "FBbt:00000417"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00045014"^^xsd:string) AnnotationAssertion( "FBbt:00004106"^^xsd:string) -AnnotationAssertion( "FBbt:00000123"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00000123"^^xsd:string) AnnotationAssertion( "FBbt:00000608"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "male genital disc specific anlage"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "djs93"^^xsd:string) AnnotationAssertion( "translobula plate neuron Tpl14"^^xsd:string) AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) Annotation( "FlyBase:FBrf0049409"^^xsd:string) "A radial subdivision of the ellipsoid body arising from the arborization patterns of small field radial fibers. There are 16 of these per ellipsoid body, 8 per hemisphere numbered 1-8, top to bottom."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) "Ht1"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) "Ht1"^^xsd:string) AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion( "FBbt:00001000"^^xsd:string) AnnotationAssertion(Annotation( "FBC:SPR"^^xsd:string) Annotation( "FlyBase:FBrf0085956"^^xsd:string) "Chordotonal organ that is part of a leg."^^xsd:string) @@ -1327,8 +1323,8 @@ AnnotationAssertion( "FlyBase:FBrf0194268"^^xsd:string) Annotation( "FlyBase:FBrf0212841"^^xsd:string) "Neuron developing from the BLD2 neuroblast."^^xsd:string) AnnotationAssertion( "FBbt:00001690"^^xsd:string) AnnotationAssertion( "2010-09-08T02:45:39Z"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00003483"^^xsd:string) AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion( "FBbt:00003993"^^xsd:string) @@ -1913,31 +1909,31 @@ AnnotationAssertion( "FBbt:00001599"^^xsd:string) AnnotationAssertion(rdfs:comment "This term comes from Crossley's classification of larval hypodermal muscles (FBrf0031016 == Crossley, 1978, Ashburner, Wright, 1978-1980 b: 499--560). This partially classifies on the basis of whether a muscle is in a layer immediately below the epidermis (external) or under another layer of hypodermal muscle (internal). This system is now little used and was only ever partially implemented in this ontology. Mappings for specific internal and external muscle classes to the modern nomenclature (FBrf0064793 == Bate, 1993, Bate, Martinez Arias, 1993: 1013--1090; FBrf0089570 == Campos-Ortega and Hartenstein, 1997, The embryonic development of Drosophila melanogaster. 2nd ed.) can be found as synonyms for the relevant terms. The most likely replacements for this term are abdominal ventral longitudinal muscles 3 & 4."^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion( "camcur"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "Ir76a"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "VFB:FBbt_00003775"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0031004"^^xsd:string) "Proximal-most segment of the costal vein. It bears two rows (dorsal an ventral) of bracted microchaetae with a single unbracted microchaeta between the two rows."^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0031004"^^xsd:string) "Proximal-most segment of the costal vein. It bears two rows (dorsal an ventral) of bracted microchaetae with a single unbracted microchaeta between the two rows."^^xsd:string) AnnotationAssertion( "FBbt:00005320"^^xsd:string) AnnotationAssertion( "djs93"^^xsd:string) -AnnotationAssertion(Annotation( "PMID:18535862"^^xsd:string) "ORN at2A"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "PMID:18535862"^^xsd:string) "ORN at2A"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064792"^^xsd:string) Annotation( "FlyBase:FBrf0159337"^^xsd:string) "Y-shaped tube that carries the secretions from the salivary glands to the embryonic/larval mouth."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064792"^^xsd:string) Annotation( "FlyBase:FBrf0159337"^^xsd:string) "Y-shaped tube that carries the secretions from the salivary glands to the embryonic/larval mouth."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00001293"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) "Transmedullary neuron that terminates in lobula layer 4 with both fine and bleb-type arborizations. It displays fine arborizations in medulla layers M1, M3, M8 and M9."^^xsd:string) +AnnotationAssertion( "FBbt:00001293"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0074007"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) Annotation( "FlyBase:FBrf0201176"^^xsd:string) "An external compound sense organ of the antenno-maxillary complex of the larval head consisting of a dome shaped cuticular process, innervated by seven circularly arranged triplets of olfactory receptor neuron dendrites. Six small papillae surround the base of the central dome."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) "Transmedullary neuron that terminates in lobula layer 4 with both fine and bleb-type arborizations. It displays fine arborizations in medulla layers M1, M3, M8 and M9."^^xsd:string) AnnotationAssertion( "FBbt:00003835"^^xsd:string) AnnotationAssertion( "FBbt:00004750"^^xsd:string) AnnotationAssertion( "FBbt:00000421"^^xsd:string) @@ -1945,49 +1941,49 @@ AnnotationAssertion( "FBC:BrainName"^^xsd:string) Annotation( ) "IPS"^^xsd:string) AnnotationAssertion( "FBbt:00001246"^^xsd:string) AnnotationAssertion( "FBbt:00005258"^^xsd:string) -AnnotationAssertion( "FBbt:00002379"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00002379"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00100313"^^xsd:string) AnnotationAssertion( "2011-07-11T11:44:11Z"^^xsd:string) +AnnotationAssertion( "FBbt:00100313"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002952"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A small ganglion of the larval stomatogastric nervous system. It consists of approximately 25-30 neurons that form a U-shaped ganglion wedged between the anterior aspect of the brain hemispheres and the dorsal pharynx. The somata of the neurons surround a sparse neuropil domain and are enclosed in a glial sheath. Lateral projections from these neurons form the frontal connective. Medial projections that turn anteriorly on reaching the midline form the frontal nerve. Medial projections that turn posteriorly on reaching the midline form the recurrent nerve."^^xsd:string) AnnotationAssertion( "FBbt:00003925"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0151893"^^xsd:string) Annotation( "FlyBase:FBrf0209956"^^xsd:string) "Air sac tracheoblast that is not at the tip or leading edge of an air sac primordium."^^xsd:string) AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "Azetylcholin"^^xsd:string) -AnnotationAssertion( "FBbt:00003866"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00003866"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0085744"^^xsd:string) "TTMn"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The position of the cell body of ePG3 is variable. It is the most lateral cell of the exit zone 46% of the time, but it can also be found at the positions of ePG1 (8%) or ePG2 (46%). This analysis was done using specific cell markers and taking into account which nerve the cell is associated with (von Hilchen et al., 2008)."^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "LF10"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "LF10"^^xsd:string) AnnotationAssertion( "quality of a continuant"^^xsd:string) AnnotationAssertion(rdfs:comment "Helfrich-Forster (1997) notes that the Pdf staining is faint and is only visible in 50% of examined larval brains."^^xsd:string) -AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "A compartment boundary that divides the wing pouch into anterior and posterior compartments."^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "A compartment boundary that divides the wing pouch into anterior and posterior compartments."^^xsd:string) AnnotationAssertion( "FBbt:00004497"^^xsd:string) AnnotationAssertion( "Bolwig's organ"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0204826"^^xsd:string) "ePG12"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "terminal"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "terminal"^^xsd:string) AnnotationAssertion( "sph"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) @@ -1995,29 +1991,29 @@ AnnotationAssertion( "2011-03-08T10:57:50Z"^^xsd:string) AnnotationAssertion( "FBbt:00005201"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064795"^^xsd:string) "."^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Connectivity in the lamina is extrapolated from serial EM of a single column (Meinertzhagen and O'Neil, 1991). Connectivity in the distal medulla is extrapolated from serial EM of 3 columns from a single sample (Takemura et al., 2008). Pre- versus postsynaptic innervation in the proximal medulla was inferred by scoring of terminal morphology from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB."^^xsd:string) -AnnotationAssertion( "DAC2"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00003453"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "DAC2"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "http://flybrain.neurobio.arizona.edu/Flybrain/html/atlas/silver/horiz/hrsil22.html"^^xsd:string) "Region of the cortex overlying the mushroom body calyx. It is distinct from the surrounding cortex because it contains the cell bodies of Kenyon cells (globuli cell bodies) which are smaller than other neuronal cell bodies (soma) in the midbrain cortex."^^xsd:string) -AnnotationAssertion( "FBbt:00002268"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00002268"^^xsd:string) AnnotationAssertion( "FBbt:00100424"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00004667"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0214320"^^xsd:string) "aPSO"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0155900"^^xsd:string) "A synaptic neuropil domain of the larval brain located posterior to the medial lobe of the mushroom body. It is separated from the centro-posterior medial compartment by the antenno-cerebral tract to which it is connected by a branch. Its axons project mainly into the posterior transverse tract and it receives a branch of the antenno-cerebral tract."^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00002785"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0155900"^^xsd:string) "A synaptic neuropil domain of the larval brain located posterior to the medial lobe of the mushroom body. It is separated from the centro-posterior medial compartment by the antenno-cerebral tract to which it is connected by a branch. Its axons project mainly into the posterior transverse tract and it receives a branch of the antenno-cerebral tract."^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0075001"^^xsd:string) "Esophageal ganglion of the embryonic/larval brain. It is formed by a group of cells connected through the proventricular nerve to the proventricular ganglion. From a dorsal perspective, it lies to the right of esophageal ganglion 1."^^xsd:string) -AnnotationAssertion( "larval mesothoracic ventral sensory cluster"^^xsd:string) AnnotationAssertion( "FBbt:00002261"^^xsd:string) +AnnotationAssertion( "larval mesothoracic ventral sensory cluster"^^xsd:string) AnnotationAssertion( "chebi_ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00003812"^^xsd:string) @@ -2032,8 +2028,8 @@ AnnotationAssertion(Annotation( "FlyBase:FBrf0206543"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "FBbt:00003597"^^xsd:string) AnnotationAssertion( "FBbt:00000727"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0051437"^^xsd:string) Annotation( "FlyBase:FBrf0179739"^^xsd:string) Annotation( "FlyBase:FBrf0187305"^^xsd:string) "Ipsilateral odorant receptor neuron that expresses Gr21a (FBgn0041250). It innervates antennal lobe glomerulus V. Unlike many other antennal olfactory receptor neurons, it does not send an axon branch through the antennal commissure to innervate the equivalent contralateral glomerulus. Suh et al., (2004), identify this neuron as being sensitive to CO2 levels."^^xsd:string) AnnotationAssertion( "2011-03-08T10:05:57Z"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0051437"^^xsd:string) Annotation( "FlyBase:FBrf0179739"^^xsd:string) Annotation( "FlyBase:FBrf0187305"^^xsd:string) "Ipsilateral odorant receptor neuron that expresses Gr21a (FBgn0041250). It innervates antennal lobe glomerulus V. Unlike many other antennal olfactory receptor neurons, it does not send an axon branch through the antennal commissure to innervate the equivalent contralateral glomerulus. Suh et al., (2004), identify this neuron as being sensitive to CO2 levels."^^xsd:string) AnnotationAssertion( "2008-09-08T01:01:44Z"^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10158"^^xsd:string) "Tm5Y(11)"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) @@ -2041,55 +2037,55 @@ AnnotationAssertion( "FlyBrain_NDB:10437"^^xsd:string) "ORN (VM1)"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00003031"^^xsd:string) -AnnotationAssertion( "FBbt:00000971"^^xsd:string) AnnotationAssertion( "FBbt:10005245"^^xsd:string) +AnnotationAssertion( "FBbt:00000971"^^xsd:string) +AnnotationAssertion( "FBbt:00003031"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00004272"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "sternal bristle"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00003134"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "I1mn"^^xsd:string) +AnnotationAssertion( "FBbt:00003134"^^xsd:string) AnnotationAssertion( "larval alary muscle 3"^^xsd:string) -AnnotationAssertion( "VBC"^^xsd:string) -AnnotationAssertion( "SB2"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "SB2"^^xsd:string) +AnnotationAssertion( "VBC"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0137194"^^xsd:string) Annotation( "FlyBase:FBrf0152351"^^xsd:string) "Most anterior L-type chemosensilla of the labellum."^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0068700"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00004699"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0068700"^^xsd:string) "."^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00004699"^^xsd:string) AnnotationAssertion( "adult ORN Or43a"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( "2010-02-12T04:14:18Z"^^xsd:string) -AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00040041"^^xsd:string) +AnnotationAssertion( "sr544"^^xsd:string) +AnnotationAssertion( "2010-02-12T04:14:18Z"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00005696"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( "somatic stem cell"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "VFB:FBbt_00003921"^^xsd:string) AnnotationAssertion(rdfs:comment "Pre- versus postsynaptic innervation judged by scoring of terminal morphology from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB."^^xsd:string) +AnnotationAssertion( "VFB:FBbt_00003921"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00100299"^^xsd:string) AnnotationAssertion( "FBbt:00100639"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "ANON:ANON"^^xsd:string) "An oxoacid containing a single carboxy group."^^xsd:string) -AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "lLNv"^^xsd:string) AnnotationAssertion( "FBbt:00003097"^^xsd:string) @@ -3451,63 +3447,63 @@ AnnotationAssertion( "FBbt:00000865"^^xsd:string) AnnotationAssertion( "FBbt:00001999"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBrain_NDB:10161"^^xsd:string) "Tm7"^^xsd:string) AnnotationAssertion( "FBbt:00003139"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBrain_NDB:10161"^^xsd:string) "Tm7"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0055900"^^xsd:string) Annotation( "FlyBase:FBrf0064795"^^xsd:string) Annotation( "FlyBase:FBrf0090460"^^xsd:string) Annotation( "http://www.neuro.uoregon.edu/doelab/lineages/texts/62 description.html"^^xsd:string) "First born ganglion mother cell of neuroblast NB6-2."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0105282"^^xsd:string) "A massive bundle of neurons crossing the midline at the boundary between subesophageal and supraesophageal ganglia. It carries axons of mainly tritocerebral origin although some axons of neurons located in the mandibular neuromere also contribute to this commissure."^^xsd:string) AnnotationAssertion( "FBbt:00000489"^^xsd:string) -AnnotationAssertion( "FBbt:00000384"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0031012"^^xsd:string) "caudal end fibers"^^xsd:string) +AnnotationAssertion( "FBbt:00000384"^^xsd:string) AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "A subdivision of the gut along its long axis."^^xsd:string) AnnotationAssertion( "FBbt:00000495"^^xsd:string) AnnotationAssertion( "david"^^xsd:string) -AnnotationAssertion( "mmc46"^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10182"^^xsd:string) "Y6"^^xsd:string) -AnnotationAssertion( "FBbt:00000104"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "mmc46"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00000104"^^xsd:string) AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) Annotation( ) "LCA"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002755"^^xsd:string) AnnotationAssertion(rdfs:comment "The position of the cell body of ePG4 is very stable: it is found at its position 96% of the time. Rarely, it can be found at the position of ePG5 (4%). This analysis was done using specific cell markers and taking into account which nerve the cell is associated with (von Hilchen et al., 2008)."^^xsd:string) AnnotationAssertion(Annotation( "FlyBrain_NDB:10137"^^xsd:string) "Tm14"^^xsd:string) AnnotationAssertion( "FBbt:00002671"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0194268"^^xsd:string) Annotation( "FlyBase:FBrf0212841"^^xsd:string) "."^^xsd:string) -AnnotationAssertion( "larval peritracheal cell"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0130087"^^xsd:string) "tritocerebral neuron TC1"^^xsd:string) -AnnotationAssertion( "dl"^^xsd:string) +AnnotationAssertion( "larval peritracheal cell"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "dl"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0068700"^^xsd:string) "Mechanosensory neuron innervating a mesothoracic leg taste bristle. Each bristle is singly innervated by a mechanosensory neuron (Stocker 1994)."^^xsd:string) AnnotationAssertion( "abdominal tergite 11"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSdescription.html#dp1"^^xsd:string) "A dorsal, mono-innervated campaniform sensillum of larval abdominal segments 1-7."^^xsd:string) AnnotationAssertion( "djs93"^^xsd:string) -AnnotationAssertion(Annotation( "FBC:ds555"^^xsd:string) "P1 SalG"^^xsd:string) +AnnotationAssertion(Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSdescription.html#dp1"^^xsd:string) "A dorsal, mono-innervated campaniform sensillum of larval abdominal segments 1-7."^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) +AnnotationAssertion(Annotation( "FBC:ds555"^^xsd:string) "P1 SalG"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00007153"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "Germ layer that forms the middle layer of the embryo (between ectoderm and endoderm) following gastrulation. Its restricted fate includes forming muscle, heart, hemocytes and fat body."^^xsd:string) AnnotationAssertion( "oACT"^^xsd:string) -AnnotationAssertion( "FBbt:00045037"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00000474"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "heterotip tracheal tip cell"^^xsd:string) +AnnotationAssertion( "FBbt:00045037"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0007734"^^xsd:string) "A thin-walled ovoid ampulla about 20 x 10 um in size, located medially against the front wall of the head, directly beneath the ptilinal fold and antennae. The frontal pulsatile organ muscle 16 is inserted on its rear wall."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "heterotip tracheal tip cell"^^xsd:string) +AnnotationAssertion( "FBbt:00000474"^^xsd:string) AnnotationAssertion( "FBbt:00003390"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00000623"^^xsd:string) -AnnotationAssertion( "FBbt:00002728"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00002728"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "mVN1"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0107836"^^xsd:string) "Dorso-lateral glomerulus of the adult antennal lobe. It lies dorsomedial to glomerulus VM7 and dorsomedial to glomerulus DM3."^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00001717"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00001717"^^xsd:string) AnnotationAssertion( "FBbt:00000938"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A dorsolaterally located, embryonic/larval hypodermal muscle that extends from the wall of the pharynx to the epidermis of the prothoracic segment."^^xsd:string) AnnotationAssertion( "FBbt:00013245"^^xsd:string) @@ -3516,108 +3512,108 @@ AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "DN2"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00000744"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0211729"^^xsd:string) Annotation( "doi:10.1371/journal.pbio.1000461.g004"^^xsd:string) "Multiglomerular adult antennal lobe projection neuron of the adPN lineage. It is born from the antero-dorsal neuroblast, from the 12th embryonic division of the antero-dorsal antennal lobe neuroblast after the division that produce DC1 adPN."^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00005338"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00000004"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0211729"^^xsd:string) Annotation( "doi:10.1371/journal.pbio.1000461.g004"^^xsd:string) "Antennal lobe projection neuron from the ad neuroblast lineage whose dendrites innervate only antennal lobe glomerulus DM4. This neuron is born from the 15th division of the antero-dorsal antennal lobe neuroblast during embryogenesis (Yu et al., 2010)."^^xsd:string) -AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00000530"^^xsd:string) +AnnotationAssertion( "FBbt:00000004"^^xsd:string) AnnotationAssertion( "FBbt:00004252"^^xsd:string) +AnnotationAssertion( "FBbt:00000530"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "camcur"^^xsd:string) AnnotationAssertion( "FBbt:00110052"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00003971"^^xsd:string) AnnotationAssertion( "FBbt:00016023"^^xsd:string) +AnnotationAssertion( "FBbt:00003971"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "T1 DO1"^^xsd:string) -AnnotationAssertion( "49a"^^xsd:string) AnnotationAssertion( "2010-10-19T05:57:01Z"^^xsd:string) -AnnotationAssertion( "2011-03-08T10:57:11Z"^^xsd:string) +AnnotationAssertion( "49a"^^xsd:string) AnnotationAssertion( "genital chamber"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "2011-03-08T10:57:11Z"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "CARO:MAH"^^xsd:string) "Cell that has as its part a cytoskeleton that allows for tight cell to cell contact and which has apical-basal cell polarity."^^xsd:string) AnnotationAssertion( "embryonic cuprophilic cell specific anlage"^^xsd:string) -AnnotationAssertion( "anterior spiracle specific anlage"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "gracilis"^^xsd:string) -AnnotationAssertion( "CL:0000441"^^xsd:string) +AnnotationAssertion( "anterior spiracle specific anlage"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A4 VO6"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "CL:0000441"^^xsd:string) +AnnotationAssertion( "gracilis"^^xsd:string) AnnotationAssertion( "FBbt:00110027"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00000523"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064803"^^xsd:string) "PMG"^^xsd:string) -AnnotationAssertion( "FBbt:00000628"^^xsd:string) -AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00000595"^^xsd:string) +AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00000628"^^xsd:string) AnnotationAssertion( "FBbt:00004245"^^xsd:string) +AnnotationAssertion( "FBbt:00000595"^^xsd:string) AnnotationAssertion( "2011-07-26T03:57:28Z"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Names are assigned according to the area of the mushroom body they arborize, as detailed in Tanaka et al., (2008). A precise number for the MB-M7 neurons was not possible by Tanaka et al., (2008) due to the enhancer trap they used (NP2297) also labelling the cell bodies of other neurons in close proximity. Also, because the arborization pattern of the MB-CP1, MB-M1 and MB-M7 intermingle, it was not possible to distinguish arborization areas for each population."^^xsd:string) AnnotationAssertion( "FBbt:00004461"^^xsd:string) -AnnotationAssertion( "FlyBrain_NDB:10450"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) +AnnotationAssertion( "FlyBrain_NDB:10450"^^xsd:string) AnnotationAssertion(Annotation( "FBC:DOS"^^xsd:string) "embryonic endocrine system"^^xsd:string) -AnnotationAssertion( "FBbt:00000121"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) +AnnotationAssertion( "FBbt:00000121"^^xsd:string) AnnotationAssertion( "FBbt:00000867"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion(Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSorganization0.html"^^xsd:string) "vmd5"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00002940"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0065487"^^xsd:string) Annotation( "FlyBase:FBrf0214320"^^xsd:string) "Larval neuro-secretory neuron whose cell body is located in the superior medial protocerebrum. There is one cell per brain hemisphere (McCormick and Nichols, 1993) and its axon innervates the corpus cardiacum (Wegener et al., 2011)."^^xsd:string) -AnnotationAssertion( "tSNSP"^^xsd:string) -AnnotationAssertion( "VFB:FBbt_00003937"^^xsd:string) -AnnotationAssertion( "FBbt:00004577"^^xsd:string) +AnnotationAssertion( "FBbt:00002940"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0045366"^^xsd:string) Annotation( "FlyBase:FBrf0074007"^^xsd:string) Annotation( "FlyBase:FBrf0075072"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "Multiply innervated sensillum, composed of an anterior and a posterior sensillum, located on the floor of the larval pharynx. It is innervated by 3 or 4 neurons whose axons join an anteriorly directed bundle that joins the labral nerve."^^xsd:string) +AnnotationAssertion( "FBbt:00004577"^^xsd:string) +AnnotationAssertion( "VFB:FBbt_00003937"^^xsd:string) +AnnotationAssertion( "tSNSP"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00001931"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0183937"^^xsd:string) "cluster I muscle founder cell"^^xsd:string) -AnnotationAssertion( "CHEBI:18295"^^xsd:string) +AnnotationAssertion( "FBbt:00001931"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "Aminokarbonsaeure"^^xsd:string) +AnnotationAssertion( "CHEBI:18295"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fan shaped neuron F6"^^xsd:string) -AnnotationAssertion( "FlyBrain_NDB:10471"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00100247"^^xsd:string) +AnnotationAssertion( "FlyBrain_NDB:10471"^^xsd:string) +AnnotationAssertion( "fan shaped neuron F6"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00100383"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0051437"^^xsd:string) "Interneuron whose dendrite innervates the antennal lobe and whose axon innervates some higher brain centre - generally the mushroom body calyx and/or the lateral horn."^^xsd:string) AnnotationAssertion( "FBbt:00007598"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064795"^^xsd:string) Annotation( "FlyBase:FBrf0090460"^^xsd:string) Annotation( "FlyBase:FBrf0138252"^^xsd:string) Annotation( "http://www.neuro.uoregon.edu/doelab/lineages/texts/71 description.html"^^xsd:string) "Fifth born ganglion mother cell of neuroblast NB7-1."^^xsd:string) AnnotationAssertion( "FBbt:00005041"^^xsd:string) -AnnotationAssertion( "FBbt:00002497"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064795"^^xsd:string) Annotation( "FlyBase:FBrf0090460"^^xsd:string) Annotation( "FlyBase:FBrf0138252"^^xsd:string) Annotation( "http://www.neuro.uoregon.edu/doelab/lineages/texts/71 description.html"^^xsd:string) "Fifth born ganglion mother cell of neuroblast NB7-1."^^xsd:string) AnnotationAssertion( "FBbt:00003324"^^xsd:string) +AnnotationAssertion( "FBbt:00002497"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0037847"^^xsd:string) "repressed male genital primordia"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00004286"^^xsd:string) AnnotationAssertion( "wing plate"^^xsd:string) +AnnotationAssertion( "FBbt:00004286"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "M"^^xsd:string) AnnotationAssertion( ) @@ -6521,13 +6517,13 @@ AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "medulla cortex"^^xsd:string) -AnnotationAssertion( "FBbt:00001263"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "FBbt:00001263"^^xsd:string) AnnotationAssertion( "FBbt:00001729"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0208427"^^xsd:string) "A dopaminergic neuron whose cell body is located in a cluster of approximately 2 cell bodies in the cortex of the posterior lateral protocerebrum."^^xsd:string) AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) Annotation( ) "PMS"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002150"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) @@ -6538,38 +6534,38 @@ AnnotationAssertion( "2009-08-13T02:51:35Z"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A1 DO1"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "FBbt:00007464"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00007464"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00100217"^^xsd:string) -AnnotationAssertion(rdfs:comment "Most nerves carry both sensory and motor projections and in most cases the identity of all projections they do carry is not know. This is not, therefore a reliable means of classification. It would only be possible to support this using auto-classification, which is hard. For these reasons, this class has been obsoleted. If no more specific term can be found, please just use nerve (FBbt:00005105)."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion(rdfs:comment "Most nerves carry both sensory and motor projections and in most cases the identity of all projections they do carry is not know. This is not, therefore a reliable means of classification. It would only be possible to support this using auto-classification, which is hard. For these reasons, this class has been obsoleted. If no more specific term can be found, please just use nerve (FBbt:00005105)."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "abdominal 2 neuroblast dorso-lateral cluster"^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "TC4"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00100607"^^xsd:string) AnnotationAssertion( "FBbt:00000670"^^xsd:string) AnnotationAssertion(Annotation( "FBC:ds555"^^xsd:string) "P1 FrGgl"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "quality of an object"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00001099"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0075072"^^xsd:string) Annotation( "FlyBase:FBrf0103263"^^xsd:string) "Papilla of the terminal organ. It is located more lateral than the dorsomedial papilla."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A1 DA"^^xsd:string) AnnotationAssertion( "VFB:FBbt_00003676"^^xsd:string) -AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "positively_regulates"^^xsd:string) @@ -6579,18 +6575,18 @@ AnnotationAssertion(Annotation( "FBbt:00100757"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064789"^^xsd:string) "Imaginal disc that in the adults gives rise to the labrum, anterior and posterior cibarial plates, fish trap bristles, epipharyngeal sclerite and clypeus (Cohen, 1993)."^^xsd:string) AnnotationAssertion( "FBbt:00000465"^^xsd:string) -AnnotationAssertion(Annotation( "http://flybrain.neurobio.arizona.edu/Flybrain/html/terms/terms.html"^^xsd:string) "A neurosecretory organ forming part of the retrocerebral complex."^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) "Inferior (ventral) part of the posterior slope, below the plane of the inferior VLP commissure and the posterior optic commissure."^^xsd:string) +AnnotationAssertion(Annotation( "http://flybrain.neurobio.arizona.edu/Flybrain/html/terms/terms.html"^^xsd:string) "A neurosecretory organ forming part of the retrocerebral complex."^^xsd:string) AnnotationAssertion(Annotation( "KEGG COMPOUND:"^^xsd:string) "2-(3,4-Dihydroxyphenyl)ethylamine"^^xsd:string) +AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) "Inferior (ventral) part of the posterior slope, below the plane of the inferior VLP commissure and the posterior optic commissure."^^xsd:string) AnnotationAssertion( "CARO:0000040"^^xsd:string) AnnotationAssertion( "2011-03-04T03:39:30Z"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "Stage 16 begins when the intersegmental grooves can be distinguished at mid-dorsal level, and ends when the dorsal ridge (frontal sac) has overgrown the tip of the clypeolabrum, which is thereby enclosed in the atrium. During this stage the ventral nerve cord retracts to about 60% egg length. Duration at 25 degrees C: approximately 180 minutes (780-960 minutes after egg laying)."^^xsd:string) AnnotationAssertion( "FBbt:00001180"^^xsd:string) AnnotationAssertion( "FBbt:00003610"^^xsd:string) AnnotationAssertion( "FBbt:00007328"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00001238"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "DP1m adPN"^^xsd:string) @@ -6601,45 +6597,45 @@ AnnotationAssertion(Annotation( ) AnnotationAssertion( ) AnnotationAssertion( "FlyBrain_NDB:10120"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) Annotation( "FlyBase:FBrf0134489"^^xsd:string) Annotation( "FlyBase:FBrf0147119"^^xsd:string) "Gustatory receptor neuron associated with the terminal organ."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A5 DO"^^xsd:string) -AnnotationAssertion( "FBbt:00067052"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) Annotation( "FlyBase:FBrf0134489"^^xsd:string) Annotation( "FlyBase:FBrf0147119"^^xsd:string) "Gustatory receptor neuron associated with the terminal organ."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00067052"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A5 DO"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00110102"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00001923"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "Cell which makes part of the sheath that encloses the soma and dendrite of an eo-type sensory neuron."^^xsd:string) -AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion( "larval dorsal sensory cluster of A1-7"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "david"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00001052"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0054242"^^xsd:string) "EGM1"^^xsd:string) AnnotationAssertion( "dendritic arborising neuron"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "LTa5"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0045359"^^xsd:string) "."^^xsd:string) -AnnotationAssertion( "intersegmental bipolar neuron"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "LTa5"^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion( "intersegmental bipolar neuron"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0045359"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "FBC:SPR"^^xsd:string) "Somatic muscle that is part of the adult head."^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064798"^^xsd:string) "Portion of the eye disc which is posterior to the morphogenetic furrow. It contains developing ommatidial clusters whose maturity increases with distance posterior to the furrow."^^xsd:string) AnnotationAssertion( "FBbt:00007027"^^xsd:string) -AnnotationAssertion( "midline glia"^^xsd:string) -AnnotationAssertion( "FBbt:00000028"^^xsd:string) -AnnotationAssertion( "FBbt:00004323"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064798"^^xsd:string) "Portion of the eye disc which is posterior to the morphogenetic furrow. It contains developing ommatidial clusters whose maturity increases with distance posterior to the furrow."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00004323"^^xsd:string) +AnnotationAssertion( "FBbt:00000028"^^xsd:string) +AnnotationAssertion( "midline glia"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "Tracheal system of the pupa."^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) Annotation( "FlyBase:FBrf0034074"^^xsd:string) "."^^xsd:string) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "FlyBase:FBrf0007735"^^xsd:string) Annotation( "FlyBase:FBrf0034074"^^xsd:string) "."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0105282"^^xsd:string) "Fiber tract founder cluster located dorsally in the protocerebrum. Along with founder clusters D/T and P1, fibers from the P3m fiber tract founder cluster pioneer the cervical connective."^^xsd:string) AnnotationAssertion( "FBbt:00007199"^^xsd:string) AnnotationAssertion( "FBbt:00004274"^^xsd:string) @@ -6647,30 +6643,30 @@ AnnotationAssertion( AnnotationAssertion(Annotation( "FlyBase:FBrf0049410"^^xsd:string) "An amacrine neuron that is intrinsic to the medulla and that branches and arborizes in the proximal medulla. Generally, the soma is located in the cortex adjacent to the medulla and that projects through the proximal surface of the medulla, to form wide (sometimes very wide) terminal arborizations mainly or completely restricted to a single layer of the medulla."^^xsd:string) AnnotationAssertion( "FBbt:00001954"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "FBbt:00001205"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "The neurotransmitter was assessed by co-labelling cells with a Cha-GAL4.7.4 driver [FBtp0014830] and an anti-ChAT antibody (Varija Raghu et al., 2011). Pre- versus postsynaptic innervation judged by scoring of terminal morphology from figures in Fischbach and Dittrich (1989) as assessed by FlyBrain Neuron DB."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0030988"^^xsd:string) "Malpighian tubule attached to the right hand side of the adult alimentary canal and lying in an anterior orientation (Wessing and Eichelberg, 1978)."^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( "DVM I"^^xsd:string) -AnnotationAssertion( "djs93"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002302"^^xsd:string) +AnnotationAssertion( "djs93"^^xsd:string) +AnnotationAssertion( "DVM I"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0041814"^^xsd:string) "T2 pl1"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00004638"^^xsd:string) AnnotationAssertion( "FBbt:00000905"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion(Annotation( "ChemIDplus:"^^xsd:string) "piperidinic acid"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "VFB:FBbt_00003815"^^xsd:string) AnnotationAssertion( "FBbt:00003844"^^xsd:string) +AnnotationAssertion( "VFB:FBbt_00003815"^^xsd:string) AnnotationAssertion( "FBbt:00000679"^^xsd:string) AnnotationAssertion( "subanal plate"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( "VFB:FBbt_00003973"^^xsd:string) AnnotationAssertion( "FBbt:00005260"^^xsd:string) AnnotationAssertion( "abdominal 3 neuroblast dorso-lateral cluster"^^xsd:string) @@ -12671,12 +12667,12 @@ AnnotationAssertion(Annotation( "FlyBase:FBrf0059164"^^xsd:string) "Bilaterally paired (Kolhekar et al., 1997) FMRFamide expressing interneuron of the subesophageal neuromere. They are located more posteriorly than the FMRFamide SE2 neurons (Schneider et al., 1993)."^^xsd:string) AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) "Emerging from cells located in the lateral cell body region, the anterior superior lateral protocerebrum fascicle exhibits a J-shape and terminates in the boundary between the superior intermediate protocerebrum and the superior lateral protocerebrum just posterior to the optic tubercle."^^xsd:string) AnnotationAssertion( "FBbt:00001146"^^xsd:string) -AnnotationAssertion( ) AnnotationAssertion(Annotation( "ANON:ANON"^^xsd:string) "Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element."^^xsd:string) +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion( "FBbt:00004027"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "FBbt:00004027"^^xsd:string) AnnotationAssertion( "2010-07-22T02:50:51Z"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064778"^^xsd:string) "Secondary spermatocyte during meiotic telophase II (GO:0007139)."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0108687"^^xsd:string) "Dorsal vessel of the adult. It extends from the sixth abdominal segment to the dorsal anterior region of the brain (Curtis et al., 1999). The anterior portion, which is devoid of ostia, is the aorta, whilst the posterior (caudal) region, which has ostia, forms the heart proper."^^xsd:string) @@ -12686,9 +12682,9 @@ AnnotationAssertion( "FlyBase:FBrf0041814"^^xsd:string) "pmm1"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0194268"^^xsd:string) Annotation( "FlyBase:FBrf0212841"^^xsd:string) "Neuron developing from the TRvl neuroblast."^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSorganization0.html"^^xsd:string) "A paired cluster of sense organs and multi-dendritic sensory neurons located ventrally on each side of larval abdominal segments 1-7."^^xsd:string) -AnnotationAssertion(rdfs:comment "Needs link to cell.obo term."^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) +AnnotationAssertion(rdfs:comment "Needs link to cell.obo term."^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) Annotation( "http://www.normalesup.org/~vorgogoz/FlyPNS/PNSorganization0.html"^^xsd:string) "A paired cluster of sense organs and multi-dendritic sensory neurons located ventrally on each side of larval abdominal segments 1-7."^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "."^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00002168"^^xsd:string) @@ -12698,15 +12694,15 @@ AnnotationAssertion( "FlyBase:FBrf0049410"^^xsd:string) "A lobula plate tangential neuron that projects along and arborizes in lobula plate layer 4. This arborization remains very close to the projection and includes both bleb-type and fine terminals."^^xsd:string) AnnotationAssertion( "FBbt:00001901"^^xsd:string) AnnotationAssertion( "FBbt:00002314"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( "FBbt:00002558"^^xsd:string) AnnotationAssertion( "a3"^^xsd:string) AnnotationAssertion( "FBbt:00004540"^^xsd:string) -AnnotationAssertion( "larval cardiovascular gland"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00003013"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "larval cardiovascular gland"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBase:FBrf0205263"^^xsd:string) "mushroom body beta lobe tip"^^xsd:string) AnnotationAssertion( "FBbt:00000107"^^xsd:string) @@ -12715,16 +12711,16 @@ AnnotationAssertion( AnnotationAssertion( "FBbt:00007640"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0089570"^^xsd:string) "lda"^^xsd:string) AnnotationAssertion( ) -AnnotationAssertion( "odorant receptor neuron Or98a"^^xsd:string) -AnnotationAssertion( "FBbt:00004659"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0064787"^^xsd:string) "Anterodorsally oriented, embryonic/larval trachea that branches from the dorsal trunk in tracheal metamere 1."^^xsd:string) +AnnotationAssertion( "FBbt:00004659"^^xsd:string) +AnnotationAssertion( "odorant receptor neuron Or98a"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FBC:VH"^^xsd:string) "Superficial layer of the brain, composed of glia and the cell bodies of neurons (soma)."^^xsd:string) AnnotationAssertion( "FBbt:00003085"^^xsd:string) AnnotationAssertion( "FBbt:00002777"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) @@ -12736,12 +12732,12 @@ AnnotationAssertion( "FlyBase:FBrf0064793"^^xsd:string) Annotation( "FlyBase:FBrf0089570"^^xsd:string) "A7 DO3"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0084361"^^xsd:string) Annotation( "FlyBase:FBrf0212455"^^xsd:string) Annotation( "FlyBase:FBrf0215822"^^xsd:string) "Bilateral olfactory receptor neuron that expresses the ionotropic glutamate receptor (Ir) 64a (FBgn0035604) and the co-receptor Ir8a (FBgn0052704). Its axon branches, with one branch innervating the ipsilateral antennal lobe glomeruli DL4 and DP1 medial compartment and the other fasciculating with the antennal commissure and innervating the contralateral antennal lobe glomeruli DL4 and DP1 medial compartment (Ai et al., 2010; Silbering et al., 2011). Its dendrite transduces signals from the grooved sensillum of chamber III of the sacculus (Shanbhag et al., 1995)."^^xsd:string) AnnotationAssertion( "lamina receptor cell R7"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBim0000836"^^xsd:string) Annotation( "FlyBase:FBrf0007734"^^xsd:string) Annotation( "FlyBase:FBrf0111704"^^xsd:string) "Fifth, and most distal, segment of the tarsus."^^xsd:string) AnnotationAssertion( "hematopoietic organ"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBim0000836"^^xsd:string) Annotation( "FlyBase:FBrf0007734"^^xsd:string) Annotation( "FlyBase:FBrf0111704"^^xsd:string) "Fifth, and most distal, segment of the tarsus."^^xsd:string) AnnotationAssertion( "sr544"^^xsd:string) -AnnotationAssertion( "2011-07-11T03:31:44Z"^^xsd:string) -AnnotationAssertion( "FBbt:00040025"^^xsd:string) AnnotationAssertion( "FBbt:00001631"^^xsd:string) +AnnotationAssertion( "FBbt:00040025"^^xsd:string) +AnnotationAssertion( "2011-07-11T03:31:44Z"^^xsd:string) AnnotationAssertion(Annotation( "FBC:SPR"^^xsd:string) "Protocerebrum of the adult."^^xsd:string) AnnotationAssertion( "FBbt:00007601"^^xsd:string) AnnotationAssertion(Annotation( "FBC:BrainName"^^xsd:string) Annotation( ) "FLA"^^xsd:string) @@ -24937,24 +24933,24 @@ AnnotationAssertion( "FlyBase:FBrf0074226"^^xsd:string) Annotation( "http://flybrain.neurobio.arizona.edu/Flybrain/html/atlas/schematic/frontschem2.html"^^xsd:string) "Neuromere of intercalary segment."^^xsd:string) AnnotationAssertion( ) AnnotationAssertion(Annotation( "FlyBrain_NDB:10031"^^xsd:string) "Mt11"^^xsd:string) -AnnotationAssertion( "somatic muscle of neck"^^xsd:string) AnnotationAssertion(rdfs:comment "Maybe - dilator of pharynx."^^xsd:string) +AnnotationAssertion( "somatic muscle of neck"^^xsd:string) AnnotationAssertion(Annotation( "ISBN:978-3-11-014898-5"^^xsd:string) "The bilateral part of the head capsule below the eyes, delimited by the occipital suture behind and the mouthparts below."^^xsd:string) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) -AnnotationAssertion(Annotation( "FlyBase:FBrf0064789"^^xsd:string) "Anterior, bulbous portion of the eye-antennal disc that gives rise to the eye as well as contributing to the head capsule (Cohen, 1993)."^^xsd:string) AnnotationAssertion( "FBbt:00007425"^^xsd:string) +AnnotationAssertion(Annotation( "FlyBase:FBrf0064789"^^xsd:string) "Anterior, bulbous portion of the eye-antennal disc that gives rise to the eye as well as contributing to the head capsule (Cohen, 1993)."^^xsd:string) AnnotationAssertion(Annotation( "ChEBI:"^^xsd:string) "ammonium ions"^^xsd:string) AnnotationAssertion( "2008-09-08T01:01:44Z"^^xsd:string) AnnotationAssertion( "FBbt:00007569"^^xsd:string) AnnotationAssertion(Annotation( "FlyBase:FBrf0054242"^^xsd:string) "EGA"^^xsd:string) -AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "FBbt:00000387"^^xsd:string) -AnnotationAssertion( "d.HCV"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) +AnnotationAssertion( "d.HCV"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "fly_anatomy.ontology"^^xsd:string) AnnotationAssertion( "ORN (Or42a)"^^xsd:string)