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modules.json
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modules.json
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{
"name": "nf-core/variantbenchmarking",
"homePage": "https://github.com/nf-core/variantbenchmarking",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bcftools/annotate": {
"branch": "master",
"git_sha": "c1a7fa1c038061b344f2a41be71942061ec40d2e",
"installed_by": ["modules"]
},
"bcftools/filter": {
"branch": "master",
"git_sha": "f85dbddd7a335fc0f5ac331e8d22ca94123b654b",
"installed_by": ["modules"]
},
"bcftools/merge": {
"branch": "master",
"git_sha": "a5ba4d59c2b248c0379b0f8aeb4e7e754566cd1f",
"installed_by": ["modules"]
},
"bcftools/norm": {
"branch": "master",
"git_sha": "44096c08ffdbc694f5f92ae174ea0f7ba0f37e09",
"installed_by": ["modules"]
},
"bcftools/query": {
"branch": "master",
"git_sha": "a5ba4d59c2b248c0379b0f8aeb4e7e754566cd1f",
"installed_by": ["modules"]
},
"bcftools/reheader": {
"branch": "master",
"git_sha": "44096c08ffdbc694f5f92ae174ea0f7ba0f37e09",
"installed_by": ["modules"]
},
"bcftools/sort": {
"branch": "master",
"git_sha": "487d92367b4d7bb9f1ca694bf72736be90720b15",
"installed_by": ["modules"]
},
"bcftools/stats": {
"branch": "master",
"git_sha": "44096c08ffdbc694f5f92ae174ea0f7ba0f37e09",
"installed_by": ["modules"]
},
"bcftools/view": {
"branch": "master",
"git_sha": "1013101da4252623fd7acf19cc581bae91d4f839",
"installed_by": ["modules"]
},
"bedtools/merge": {
"branch": "master",
"git_sha": "a5377837fe9013bde89de8689829e83e84086536",
"installed_by": ["modules"]
},
"happy/happy": {
"branch": "master",
"git_sha": "41fc46dfd94dddf4fdee633629090c1c3bc9f668",
"installed_by": ["modules"]
},
"happy/prepy": {
"branch": "master",
"git_sha": "01b55f288c25490236af1cd044c9bca17598ecfe",
"installed_by": ["modules"]
},
"happy/sompy": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"manta/convertinversion": {
"branch": "master",
"git_sha": "1e2b7fb7106852388610c0360d234b0829eb980e",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "b8d36829fa84b6e404364abff787e8b07f6d058c",
"installed_by": ["modules"]
},
"picard/createsequencedictionary": {
"branch": "master",
"git_sha": "759232fe6aed8761bcb3a5d23813f2fa59d985ed",
"installed_by": ["modules"]
},
"picard/liftovervcf": {
"branch": "master",
"git_sha": "0dee12b56ccecc416d6f7a1ccd85fd571eab3307",
"installed_by": ["modules"]
},
"rtgtools/format": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"rtgtools/vcfeval": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"survivor/filter": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"survivor/merge": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"survivor/stats": {
"branch": "master",
"git_sha": "398375d72766cac92c4ffcf6927cac2d65310cfd",
"installed_by": ["modules"]
},
"svanalyzer/svbenchmark": {
"branch": "master",
"git_sha": "8a2dd9e84cde68ebba45fb2c602c312c999c02a0",
"installed_by": ["modules"]
},
"svync": {
"branch": "master",
"git_sha": "3df1a372b844c98c31ec3446faac7c75e64518a3",
"installed_by": ["modules"]
},
"tabix/bgzip": {
"branch": "master",
"git_sha": "09d3c8c29b31a2dfd610305b10550f0e1dbcd4a9",
"installed_by": ["modules"]
},
"tabix/bgziptabix": {
"branch": "master",
"git_sha": "09d3c8c29b31a2dfd610305b10550f0e1dbcd4a9",
"installed_by": ["modules"]
},
"tabix/tabix": {
"branch": "master",
"git_sha": "09d3c8c29b31a2dfd610305b10550f0e1dbcd4a9",
"installed_by": ["modules"]
},
"truvari/bench": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"ucsc/liftover": {
"branch": "master",
"git_sha": "f67072004d8127beef877e7ba96ca5a05915d253",
"installed_by": ["modules"]
},
"wittyer": {
"branch": "master",
"git_sha": "be84844983b332fa7d3d38dec06af6f953d83189",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "9d05360da397692321d377b6102d2fb22507c6ef",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "772684d9d66f37b650c8ba5146ac1ee3ecba2acb",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "bbd5a41f4535a8defafe6080e00ea74c45f4f96c",
"installed_by": ["subworkflows"]
}
}
}
}
}
}