From 1a646b2d9da617ca8ae9b132f48dbb79ac93c977 Mon Sep 17 00:00:00 2001
From: Nico Trummer <nictru32@gmail.com>
Date: Mon, 18 Mar 2024 14:50:41 +0100
Subject: [PATCH] Collect more version outputs

---
 subworkflows/local/peaks.nf   | 1 -
 subworkflows/local/ranking.nf | 5 +++++
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/subworkflows/local/peaks.nf b/subworkflows/local/peaks.nf
index c6cce2b..f838164 100644
--- a/subworkflows/local/peaks.nf
+++ b/subworkflows/local/peaks.nf
@@ -1,7 +1,6 @@
 // Modules
 include { GAWK as CLEAN_BED               } from '../../modules/nf-core/gawk/main'
 include { BEDTOOLS_SORT as SORT_PEAKS     } from '../../modules/nf-core/bedtools/sort/main'
-include { BEDTOOLS_SUBTRACT as BLACKLIST  } from '../../modules/nf-core/bedtools/subtract/main'
 include { STARE                           } from '../../modules/local/stare/main'
 include { COMBINE_TABLES as AFFINITY_MEAN } from '../../modules/local/combine_tables/main'
 include { COMBINE_TABLES as AFFINITY_RATIO} from '../../modules/local/combine_tables/main'
diff --git a/subworkflows/local/ranking.nf b/subworkflows/local/ranking.nf
index 4b9fe5f..25c46b4 100644
--- a/subworkflows/local/ranking.nf
+++ b/subworkflows/local/ranking.nf
@@ -32,6 +32,11 @@ workflow RANKING {
                                                 .map{ rankings -> [[id: "all"], rankings]}
     )
 
+    ch_versions = ch_versions.mix(TF_TG_SCORE.out.versions,
+                                  CREATE_RANKING.out.versions,
+                                  COMBINE_RANKINGS.out.versions
+    )
+
 
     emit:
     assay_specific = CREATE_RANKING.out.ranking