diff --git a/modules/local/cellrangerarc/Dockerfile b/modules/nf-core/cellrangerarc/Dockerfile similarity index 100% rename from modules/local/cellrangerarc/Dockerfile rename to modules/nf-core/cellrangerarc/Dockerfile diff --git a/modules/local/cellrangerarc/README.md b/modules/nf-core/cellrangerarc/README.md similarity index 100% rename from modules/local/cellrangerarc/README.md rename to modules/nf-core/cellrangerarc/README.md diff --git a/modules/local/cellrangerarc/count/main.nf b/modules/nf-core/cellrangerarc/count/main.nf similarity index 100% rename from modules/local/cellrangerarc/count/main.nf rename to modules/nf-core/cellrangerarc/count/main.nf diff --git a/modules/local/cellrangerarc/count/meta.yml b/modules/nf-core/cellrangerarc/count/meta.yml similarity index 97% rename from modules/local/cellrangerarc/count/meta.yml rename to modules/nf-core/cellrangerarc/count/meta.yml index f69bc1fa..919de4dc 100644 --- a/modules/local/cellrangerarc/count/meta.yml +++ b/modules/nf-core/cellrangerarc/count/meta.yml @@ -10,7 +10,8 @@ tools: homepage: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc documentation: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc tool_dev_url: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc - licence: 10x Genomics EULA + licence: + - 10x Genomics EULA input: - meta: type: map diff --git a/modules/local/cellrangerarc/mkgtf/main.nf b/modules/nf-core/cellrangerarc/mkgtf/main.nf similarity index 100% rename from modules/local/cellrangerarc/mkgtf/main.nf rename to modules/nf-core/cellrangerarc/mkgtf/main.nf diff --git a/modules/local/cellrangerarc/mkgtf/meta.yml b/modules/nf-core/cellrangerarc/mkgtf/meta.yml similarity index 96% rename from modules/local/cellrangerarc/mkgtf/meta.yml rename to modules/nf-core/cellrangerarc/mkgtf/meta.yml index 7ce211eb..923c3e18 100644 --- a/modules/local/cellrangerarc/mkgtf/meta.yml +++ b/modules/nf-core/cellrangerarc/mkgtf/meta.yml @@ -10,7 +10,8 @@ tools: homepage: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc documentation: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc tool_dev_url: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc - licence: 10x Genomics EULA + licence: + - 10x Genomics EULA input: - gtf: type: file diff --git a/modules/local/cellrangerarc/mkref/main.nf b/modules/nf-core/cellrangerarc/mkref/main.nf similarity index 100% rename from modules/local/cellrangerarc/mkref/main.nf rename to modules/nf-core/cellrangerarc/mkref/main.nf diff --git a/modules/local/cellrangerarc/mkref/meta.yml b/modules/nf-core/cellrangerarc/mkref/meta.yml similarity index 97% rename from modules/local/cellrangerarc/mkref/meta.yml rename to modules/nf-core/cellrangerarc/mkref/meta.yml index 1eac878a..cf98e60c 100644 --- a/modules/local/cellrangerarc/mkref/meta.yml +++ b/modules/nf-core/cellrangerarc/mkref/meta.yml @@ -10,7 +10,8 @@ tools: homepage: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc documentation: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc tool_dev_url: https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/what-is-cell-ranger-arc - licence: 10x Genomics EULA + licence: + - 10x Genomics EULA input: - fasta: type: file