From e8320fa7fb64d229da75f3cbe2a6dba19de6f99d Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Mon, 10 Feb 2020 10:48:04 +0100 Subject: [PATCH] fix params --- download-singularity-img.nf | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/download-singularity-img.nf b/download-singularity-img.nf index 2b1b5303..37de4428 100644 --- a/download-singularity-img.nf +++ b/download-singularity-img.nf @@ -57,13 +57,13 @@ if (params.help) exit 0, helpMessage() params.running_tools = ["nf-core/rnafusion/${workflow.manifest.version}"] if (!params.outdir) exit 1, "Output directory not specified!" -if (params.arriba || download_all) params.running_tools.add("Arriba") -if (params.star_fusion || download_all) params.running_tools.add("STAR-Fusion") -if (params.fusioncatcher || download_all) params.running_tools.add("Fusioncatcher") -if (params.ericscript || download_all) params.running_tools.add("Ericscript") -if (params.pizzly || download_all) params.running_tools.add("Pizzly") -if (params.squid || download_all) params.running_tools.add("Squid") -if (params.fusion_inspector || download_all) params.running_tools.add("Fusion-Inspector") +if (params.arriba || params.download_all) params.running_tools.add("Arriba") +if (params.star_fusion || params.download_all) params.running_tools.add("STAR-Fusion") +if (params.fusioncatcher || params.download_all) params.running_tools.add("Fusioncatcher") +if (params.ericscript || params.download_all) params.running_tools.add("Ericscript") +if (params.pizzly || params.download_all) params.running_tools.add("Pizzly") +if (params.squid || params.download_all) params.running_tools.add("Squid") +if (params.fusion_inspector || params.download_all) params.running_tools.add("Fusion-Inspector") // Header log info log.info nfcoreHeader()