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https://nf-co.re/differentialabundance/1.5.0/docs/usage/#g should be the full name:gprofiler2, not just g
bug
Something isn't working
#305
opened Oct 22, 2024 by
vmkalbskopf
deseq_lfc_threshold parameter is not working as intended.
bug
Something isn't working
#295
opened Oct 7, 2024 by
erdikucuk
Gene sets in the shinyngs app
enhancement
New feature or request
#294
opened Oct 4, 2024 by
Jeff-hard
For spike-in analysis, remove control features from outputs
enhancement
New feature or request
#277
opened Jun 4, 2024 by
dshechter
Requests: Enhancements to DESeq2 csv outputs and PDF outputs
enhancement
New feature or request
#276
opened Jun 4, 2024 by
dshechter
Provide a parameter to disable rmarkdown report creation in the differential abundance pipeline
enhancement
New feature or request
#275
opened May 24, 2024 by
shreya-sharma20
Missing colour and hover labels in interactive report volcano plot
bug
Something isn't working
#270
opened May 21, 2024 by
ajeffs
Auto-format sample names
enhancement
New feature or request
#262
opened Apr 12, 2024 by
nick-youngblut
Failed to publish file => double forward slashes
bug
Something isn't working
#261
opened Apr 12, 2024 by
nick-youngblut
Error with samplesheet.csv with two column headers that have prefix in common
bug
Something isn't working
#249
opened Mar 12, 2024 by
aghr
Name of blocking variable not correctly recognized
bug
Something isn't working
#245
opened Feb 29, 2024 by
aghr
Dev version: On parameters website list parameter gene_sets_files in section GSEA
enhancement
New feature or request
#243
opened Feb 23, 2024 by
aghr
Mark --matrix as a required parameter in the parameter section on the diffabundance website
enhancement
New feature or request
#238
opened Feb 20, 2024 by
aghr
Setting differential_subset_to_contrast_samples: true with output from nfcore rnaseq causes error
bug
Something isn't working
#234
opened Feb 16, 2024 by
aghr
RMARKDOWNNOTEBOOK - Error in \Something isn't working
cor()\
: ! supply both 'x' and 'y' or a matrix-like 'x'
bug
#230
opened Feb 2, 2024 by
tracelail
PLOT_EXPLORATORY module breaks with large number of samples.
bug
Something isn't working
#214
opened Dec 5, 2023 by
kai-lawsonmcdowall
Multiple variables/interactions
enhancement
New feature or request
#211
opened Dec 4, 2023 by
mtruglio
Add log2_assays docu to nextflow_schema after shiny fix
enhancement
New feature or request
#153
opened Aug 24, 2023 by
WackerO
add apeglm log fold change shrinkage
enhancement
New feature or request
#152
opened Aug 18, 2023 by
bumproo
Differential splicing analysis using rMATS
enhancement
New feature or request
#115
opened Apr 21, 2023 by
dshechter
Reduce file size for report
enhancement
New feature or request
#106
opened Mar 29, 2023 by
pinin4fjords
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