From a58a045d82cbdfe6e35e6810b6dd212c27e66077 Mon Sep 17 00:00:00 2001
From: Wassim Salam <97744975+wassimsalam01@users.noreply.github.com>
Date: Mon, 23 Sep 2024 15:32:21 +0200
Subject: [PATCH 1/4] Update fub_curta.config

---
 conf/fub_curta.config | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/conf/fub_curta.config b/conf/fub_curta.config
index eecb0c3fe..d53fde429 100644
--- a/conf/fub_curta.config
+++ b/conf/fub_curta.config
@@ -2,7 +2,7 @@
 params {
     config_profile_contact = 'Wassim Salam (@wassimsalam01)'
     config_profile_contact_github = '@wassimsalam01'
-    config_profile_contact_email = 'TODO'
+    config_profile_contact_email = 'wassimsalam49@gmail.com'
     config_profile_name = 'FUB Curta'
     config_profile_description = 'Freie Universität Berlin HPC (Curta) profile'
     config_profile_url = 'https://www.fu-berlin.de/en/sites/high-performance-computing/index.html'

From 5459528c8ba13883b658982d13a21471456b6f0f Mon Sep 17 00:00:00 2001
From: Wassim Salam <97744975+wassimsalam01@users.noreply.github.com>
Date: Mon, 23 Sep 2024 15:34:50 +0200
Subject: [PATCH 2/4] Update fub_curta.config

---
 conf/fub_curta.config | 20 ++++++++++----------
 1 file changed, 10 insertions(+), 10 deletions(-)

diff --git a/conf/fub_curta.config b/conf/fub_curta.config
index d53fde429..1ece365c3 100644
--- a/conf/fub_curta.config
+++ b/conf/fub_curta.config
@@ -1,29 +1,29 @@
 // Config profile metadata
 params {
-    config_profile_contact = 'Wassim Salam (@wassimsalam01)'
+    config_profile_contact        = 'Wassim Salam (@wassimsalam01)'
     config_profile_contact_github = '@wassimsalam01'
-    config_profile_contact_email = 'wassimsalam49@gmail.com'
-    config_profile_name = 'FUB Curta'
-    config_profile_description = 'Freie Universität Berlin HPC (Curta) profile'
-    config_profile_url = 'https://www.fu-berlin.de/en/sites/high-performance-computing/index.html'
+    config_profile_contact_email  = 'wassimsalam49@gmail.com'
+    config_profile_name           = 'FUB Curta'
+    config_profile_description    = 'Freie Universität Berlin HPC (Curta) profile'
+    config_profile_url            = 'https://www.fu-berlin.de/en/sites/high-performance-computing/index.html'
 
-    max_cpus = 32
+    max_cpus   = 32
     max_memory = 772.GB
-    max_time = 14.d
+    max_time   = 14.d
 }
 
 def membership = ['/bin/bash', '-c', 'groups'].execute().text.trim()
 
 // Slurm configuration parameters
 process {
-    executor = 'slurm'
-    maxRetries = 3
+    executor       = 'slurm'
+    maxRetries     = 3
     clusterOptions = { (membership.startsWith("b") ? '--partition=begendiv,main ' : '--partition=main ') << ( task.time <= 3.h ? '--qos=hiprio' : ( task.time <= 3.d ? '--qos=prio' : '--qos=standard' ) ) }
 }
 
 // Singularity parameters
 singularity {
-    enabled = true
+    enabled    = true
     autoMounts = true
 }
 

From c7e040918cb2a4a8a657d31703fec63a959a47a1 Mon Sep 17 00:00:00 2001
From: Wassim Salam <97744975+wassimsalam01@users.noreply.github.com>
Date: Mon, 23 Sep 2024 15:36:56 +0200
Subject: [PATCH 3/4] Update fub_curta.md

---
 docs/fub_curta.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/fub_curta.md b/docs/fub_curta.md
index dcf627388..8428a6a93 100644
--- a/docs/fub_curta.md
+++ b/docs/fub_curta.md
@@ -26,7 +26,7 @@ In addition, job submissions are assigned the appropriate quality of service (QO
 
 Institute-specific pipeline profiles exists for:
 
-- [methylseq](pipeline/methylseq/fub_curta.md)
+- [methylseq](https://github.com/wassimsalam01/configs/blob/master/docs/pipeline/methylseq/fub_curta.md)
 
 ## debug profile
 

From 1f8785b5f3120a7b349eb7440380ff5e24666a2b Mon Sep 17 00:00:00 2001
From: Wassim Salam <97744975+wassimsalam01@users.noreply.github.com>
Date: Mon, 23 Sep 2024 22:06:51 +0200
Subject: [PATCH 4/4] Update fub_curta.md

---
 docs/fub_curta.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/fub_curta.md b/docs/fub_curta.md
index 8428a6a93..bfac802a8 100644
--- a/docs/fub_curta.md
+++ b/docs/fub_curta.md
@@ -26,7 +26,7 @@ In addition, job submissions are assigned the appropriate quality of service (QO
 
 Institute-specific pipeline profiles exists for:
 
-- [methylseq](https://github.com/wassimsalam01/configs/blob/master/docs/pipeline/methylseq/fub_curta.md)
+- [methylseq](https://github.com/nf-core/configs/blob/master/docs/pipeline/methylseq/fub_curta.md)
 
 ## debug profile