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Currently, the ingest workflow produces 3 metadata TSV + 3 FASTA files for the L/M/S segments and 1 all metadata + all sequences FASTA.
In discussion on Slack and nextstrain/pathogen-repo-guide#59, the suggested path forward is to switch this to 1 central metadata TSV with 3 FASTA files. This should follow the suggested plan to collapse and dedup strain metadata into a single record.
The text was updated successfully, but these errors were encountered:
Currently, the ingest workflow produces 3 metadata TSV + 3 FASTA files for the L/M/S segments and 1 all metadata + all sequences FASTA.
In discussion on Slack and nextstrain/pathogen-repo-guide#59, the suggested path forward is to switch this to 1 central metadata TSV with 3 FASTA files. This should follow the suggested plan to collapse and dedup strain metadata into a single record.
The text was updated successfully, but these errors were encountered: