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cat.html
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<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title>CAT12.9 - Computational Anatomy Toolbox for SPM12</title>
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
<link rel="stylesheet" type="text/css" href="css/cat.css" />
</head>
<body>
<div id="content">
<br />
<p align="center" style="text-align:center;">This is <b>CAT12.9 (r2583) from 2024-05-25</b><br />You can update your copy of CAT12 here: <a href="matlab:cat_update(1);">Check for update</a>.<br />If you find any bug, please report them at <a href="mailto:[email protected]">[email protected]</a>.</p>
<h1 style="text-align:center;"><img src="images/CAT.png" width=40% height=auto alt="CAT" ></h1>
<hr />
</div>
<div id="button">
<p align="center" style="text-align:center;"><a href="matlab:web(fullfile(fileparts(which('cat12')),'doc','index.html#quick'),'-new');">Open ''Quick Start Guide'' in external window</a></p>
</div>
<div style="padding-left: 5%; padding-bottom: 30px; width: 90%; ">
<h2>Description</h2>
<p>This toolbox is a an extension to <a href="matlab:web('http://www.fil.ion.ucl.ac.uk/spm/software/spm12','-new');">SPM12</a> (Wellcome Department of Cognitive Neurology) to provide computational anatomy. This covers diverse morphometric methods such as voxel-based morphometry (VBM), surface-based morphometry (SBM), deformation-based morphometry (DBM), and ROI- or label-based morphometry. It is developed by Christian Gaser and Robert Dahnke (Jena University Hospital, Departments of Psychiatry and Neurology) and free but copyright software, distributed under the terms of the <a href="matlab:web('http://www.gnu.org/licenses/gpl-2.0.html','-new');">GNU General Public Licence</a> as published by the Free Software Foundation; either version 2 of the Licence, or (at your option) any later version. If you use any CAT12 code for commercial application, please send a <a href="mailto:[email protected]">mail</a>.
</p>
<p>
This documentation contains <a class="function">interactive MATLAB links</a> that open SPM and CAT tools, e.g. to display ROIs like the <a class="function" href="matlab:cat_vol_display_label(struct('data',{{fullfile(spm('dir'),'toolbox','cat12','templates_MNI152NLin2009cAsym','Template_T1.nii'); fullfile(spm('dir'),'toolbox','cat12','templates_MNI152NLin2009cAsym','lpba40.nii')}}))">LPBA40 volume map</a>
You can find this help (e.g. if the SPM graphic window was used by SPM/CAT) in the CAT toolbox menu at the left bottom button <em>Tools > Internet/Help....</em>
</p>
<p>
For further instructions check also the <a class="function" href="matlab:web(fullfile(fileparts(which('cat12')),'doc','index.html'),'-new');">CAT12-Manual</a>.
</p>
<p>
Please <a href="matlab:web(fullfile(fileparts(which('cat12')),'doc','index.html#cite'),'-new');">cite our papers</a> and the work of other researchers if you use this software.</p><p>
Our main paper is:<br>
Gaser C, Dahnke R, P.M. Thompson, Kurth K, Luders E, Alzheimer's Disease Neuroimaging Initiative.<br>
<a href="matlab:web('https://www.biorxiv.org/content/10.1101/2022.06.11.495736','-new');">A Computational Anatomy Toolbox for the Analysis of Structural MRI Data.</a>
</p>
</div>
<div id="footer">
<p>Copyright (C) Structural Brain Mapping Group <<a href="mailto:[email protected]">[email protected]</a>></p>
</div>
</body>
</html>