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1. mikado mikado Public

   Forked from EI-CoreBioinformatics/mikado

   Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data and to select the best models in each locus.

   Python 6 2

2. oracle_trainer oracle_trainer Public

   Scripts to automate the training of Augustus, TwinScan, GeneID and SNAP.

   Python 2 1

3. CPC2 CPC2 Public

   Mirror of the CPC2 code.

   Python 2 2

4. pydata-book pydata-book Public

   Forked from wesm/pydata-book

   Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

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5. ei-liftover ei-liftover Public

   Repository to transfer gene models across (sub)genomes and check their coherence.

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6. RagTag RagTag Public

   Forked from malonge/RagTag

   Fast reference-guided genome assembly scaffolding

   Python 1