-
Notifications
You must be signed in to change notification settings - Fork 10
/
ubuntu_24_04_base
81 lines (79 loc) · 2.37 KB
/
ubuntu_24_04_base
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
FROM ubuntu:24.04
# TODO: needs to be bumped before next DP3 release
# ENV IDG_VERSION=0.8
ENV EVERYBEAM_VERSION=0578473cacf64c69bc2e05e15754cf94dd1051b9
ENV IDG_VERSION=9ce6fa88b9d746d8d7146c474992aba9b98eb41f
ENV AOFLAGGER_VERSION=b1256de90b00a5a83477274390decd6671cdcd38
RUN export DEBIAN_FRONTEND="noninteractive" && \
apt-get update && \
apt-get install -y \
bison \
build-essential \
casacore-dev \
casacore-tools \
clang-format-14 \
cmake \
doxygen \
flex \
gcovr \
gfortran \
git \
libarmadillo-dev \
libboost-date-time-dev \
libboost-filesystem-dev \
libboost-program-options-dev \
libboost-python-dev \
libboost-system-dev \
libboost-test-dev \
libcfitsio-dev \
libfftw3-dev \
libgtkmm-3.0-dev \
libhdf5-serial-dev \
liblua5.3-dev \
libpng-dev \
ninja-build \
pkg-config \
pybind11-dev \
python3-dev \
python3-h5py \
python3-numpy \
python3-pip \
python3-pytest \
python3-sphinx \
python3-sphinx-rtd-theme \
wcslib-dev \
wget \
&& \
rm -rf /var/lib/apt/lists/*
# Build aoflagger3
RUN mkdir /aoflagger && cd /aoflagger \
&& git clone https://gitlab.com/aroffringa/aoflagger.git src \
&& ( cd src/ && git checkout ${AOFLAGGER_VERSION} ) \
&& mkdir build && cd build \
&& cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr ../src \
&& ninja install \
&& cd / && rm -rf aoflagger
# Build IDG
# (PORTABLE: it may run on a different node than where it was compiled)
RUN mkdir /idg && cd /idg \
&& git clone https://git.astron.nl/RD/idg.git src \
&& ( cd src/ && git checkout ${IDG_VERSION} ) \
&& mkdir build && cd build \
&& cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DPORTABLE=ON ../src \
&& ninja install \
&& cd / && rm -rf idg
# Build EveryBeam
RUN mkdir /everybeam && cd /everybeam \
&& git clone https://git.astron.nl/RD/EveryBeam.git src \
&& ( cd src/ && git checkout ${EVERYBEAM_VERSION} ) \
&& mkdir build && cd build \
&& cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr ../src -DPYTHON_EXECUTABLE=/usr/bin/python3 \
&& ninja install \
&& cd / && rm -rf everybeam
# Install WSRT Measures (extra casacore data, for integration tests)
# Note: The file on the ftp site is updated daily. When warnings regarding leap
# seconds appear, ignore them or regenerate the docker image.
RUN wget -nv -O /WSRT_Measures.ztar ftp://ftp.astron.nl/outgoing/Measures/WSRT_Measures.ztar \
&& cd /var/lib/casacore/data \
&& tar xfz /WSRT_Measures.ztar \
&& rm /WSRT_Measures.ztar