diff --git a/examples/python/basic/.ipynb_checkpoints/CytoscapeREST_Basic1-checkpoint.ipynb b/examples/python/basic/.ipynb_checkpoints/CytoscapeREST_Basic1-checkpoint.ipynb
new file mode 100644
index 00000000..c1429761
--- /dev/null
+++ b/examples/python/basic/.ipynb_checkpoints/CytoscapeREST_Basic1-checkpoint.ipynb
@@ -0,0 +1,367 @@
+{
+ "metadata": {
+  "name": "",
+  "signature": "sha256:547a7fc519ef97dbedfd1d1a0f31dda26a0310e09a4939a9a5ac0fd2aae81cbc"
+ },
+ "nbformat": 3,
+ "nbformat_minor": 0,
+ "worksheets": [
+  {
+   "cells": [
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "# Basic Workflow Part 1: Fundamentals of Cytoscape RESTful API\n",
+      "\n",
+      "## Introduction\n",
+      "This is a basic workflow how to access Cytoscape via RESTful API.\n",
+      "\n",
+      "## System Requirments\n",
+      "* Java 7+\n",
+      "* Cytoscape 3.1.1 or later\n",
+      "* Latest version of cy-rest app\n",
+      "\n",
+      "## Questions?\n",
+      "Send them to our [mailing list]()."
+     ]
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## 1. Import Python Libraries and Basic Setup\n",
+      "\n",
+      "### Dependent Libraries\n",
+      "In this tutorial, we use several popular Python libraries to make this workflow more realistic.  Since you need to access Cytoscape via RESTful API, HTTP client library is very important tool.  In this example, we use [Requests](http://docs.python-requests.org/en/latest/) library.\n",
+      "\n",
+      "Other libraries:\n",
+      "\n",
+      "* json - for JSON processing\n",
+      "* NetworkX - network generation and analysis\n",
+      "* pandas - very powerful data analysis framework for Python\n",
+      "\n",
+      "### Basic Setup for the API\n",
+      "At this point, there is only one option for the cy-rest module: port number.  By default, port number used by cy-rest module is __1234__.  To change this, you need set a global Cytoscape property from _Edit-->Preserences-->Properties..._ and add a new property __port.number__."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Import libraries\n",
+      "import requests\n",
+      "import json\n",
+      "import networkx as nx\n",
+      "import pandas as pd\n",
+      "\n",
+      "# Basic Setup\n",
+      "PORT_NUMBER = 8080\n",
+      "BASE = 'http://localhost:' + str(PORT_NUMBER) + '/v1/'\n",
+      "\n",
+      "# Header for posting data to the server\n",
+      "HEADERS = {'Content-Type': 'application/json'}"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 31
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## 2. Test Cytoscape REST API\n",
+      "First, run a simple REST call and make sure cy-rest module is running."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Get version number of Cytoscape and REST API version\n",
+      "response1 = requests.get(BASE + 'version')\n",
+      "print(response1.content)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "{ \"apiVersion\":\"1.0.0\",\"cytoscapeVersion\": \"3.1.1\"}\n"
+       ]
+      }
+     ],
+     "prompt_number": 32
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "If the method call above works fine, you are ready to go!\n",
+      "\n",
+      "## 3. Import Networks from various data sources\n",
+      "There are several ways to load networks into Cytoscape:\n",
+      "\n",
+      "* From files\n",
+      "* From web services\n",
+      "* From Cytoscape style json\n",
+      "* From edge list"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Delete all existing networks\n",
+      "requests.delete(BASE + 'networks')\n",
+      "\n",
+      "# Array of data source. \n",
+      "network_files = [\n",
+      "    # SIF file on a web server\n",
+      "    'http://chianti.ucsd.edu/cytoscape-data/galFiltered.sif',\n",
+      "    # PSICQUIC web service query\n",
+      "    'http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/interactor/brca1_human?format=xml25'\n",
+      "]\n",
+      "\n",
+      "response2 = requests.post(BASE + 'networks?source=url', data=json.dumps(network_files), headers=HEADERS)\n",
+      "new_networks = json.loads(response2.content)\n",
+      "print(json.dumps(new_networks, indent=2))"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "[\n",
+        "  {\n",
+        "    \"source\": \"http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/interactor/brca1_human?format=xml25\", \n",
+        "    \"networkSUID\": [\n",
+        "      74052\n",
+        "    ]\n",
+        "  }, \n",
+        "  {\n",
+        "    \"source\": \"http://chianti.ucsd.edu/cytoscape-data/galFiltered.sif\", \n",
+        "    \"networkSUID\": [\n",
+        "      72638\n",
+        "    ]\n",
+        "  }\n",
+        "]\n"
+       ]
+      }
+     ],
+     "prompt_number": 58
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# From Cytoscape.js JSON\n",
+      "\n",
+      "# This is the basic structure of network JSON object:\n",
+      "small_network = {\n",
+      "        'data': {\n",
+      "            'name': 'manually generated empty network'\n",
+      "        },\n",
+      "        'elements': {\n",
+      "            'nodes':[],\n",
+      "            'edges':[]\n",
+      "        }\n",
+      "}\n",
+      "\n",
+      "response3 = requests.post(BASE + 'networks?collection=My%20Collection', data=json.dumps(small_network), headers=HEADERS)\n",
+      "\n",
+      "# From edgelist\n",
+      "edge_list = '1 2\\n' + '2 3\\n' + '1 3'\n",
+      "response3 = requests.post(BASE + 'networks?format=edgelist', data=edge_list, headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 57
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Get the node table as JSON\n",
+      "\n",
+      "# Or CSV\n",
+      "\n",
+      "# Convert it as DataFrame"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": []
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## Import & Generate Data in Python\n",
+      "\n",
+      "### Generate scale-free graphs with NetworkX"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "graphs = []\n",
+      "\n",
+      "# Create 20 small randome networks\n",
+      "for i in range(20):\n",
+      "    # Generate scale-free graph\n",
+      "    g = nx.scale_free_graph(50);\n",
+      "    \n",
+      "    # Perform simple graph analysis\n",
+      "    \n",
+      "    # Node statistics\n",
+      "    bc = nx.betweenness_centrality(g)\n",
+      "    degree = nx.degree(g)\n",
+      "    cc = nx.closeness_centrality(g)\n",
+      "    nx.set_node_attributes(g, 'betweenness', bc)\n",
+      "    nx.set_node_attributes(g, 'closeness', cc)\n",
+      "    nx.set_node_attributes(g, 'degree', degree)\n",
+      "    \n",
+      "    # Network statistics\n",
+      "    g.graph[\"avg_shortest_path_len\"] = nx.average_shortest_path_length(g)\n",
+      "    g.graph[\"density\"] = nx.density(g)\n",
+      "    graphs.append(g)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 50
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "### Send all network models to Cytoscape"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Remove all networks\n",
+      "requests.delete(BASE + 'networks')\n",
+      "\n",
+      "import cytoscape.viewer as cy\n",
+      "\n",
+      "for graph in graphs:\n",
+      "    cyjs_network = cy.from_networkx(graph)\n",
+      "    res1 = requests.post(BASE + 'networks', data=json.dumps(cyjs_network), headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 52
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## (Now graphs are in Cytoscape.  Do analysis, visualization, etc...)"
+     ]
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## Get the visualization back to this notebook."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "response = requests.get(\"http://localhost:8080/v1/networks?format=SUID\")\n",
+      "network_list = json.loads(response.content)\n",
+      "print(network_list)\n",
+      "\n",
+      "network_views = []\n",
+      "for suid in network_list:\n",
+      "    response2 = requests.get(\"http://localhost:8080/v1/networks/\" + str(suid) + \"/views/first\")\n",
+      "    network_views.append(json.loads(response2.content))"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "[67314, 68616, 68922, 67654, 68334, 72226, 66680, 69952, 71912, 69292, 67984, 71240, 65946, 70886, 66996, 69640, 66328, 70578, 71576, 70274]\n"
+       ]
+      }
+     ],
+     "prompt_number": 55
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Visual Style can be a simple Python object!\n",
+      "\n",
+      "my_style = {\n",
+      "  \"title\" : \"My Style 10\",\n",
+      "  \"defaults\" : [ {\n",
+      "    \"visualProperty\" : \"EDGE_WIDTH\",\n",
+      "    \"value\" : 11.0\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"EDGE_STROKE_UNSELECTED_PAINT\",\n",
+      "    \"value\" : \"#00ddff\"\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"NODE_WIDTH\",\n",
+      "    \"value\" : 20\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"NODE_HEIGHT\",\n",
+      "    \"value\" : 20\n",
+      "  }],\n",
+      "  \"mappings\" : [ {\n",
+      "    \"mappingType\" : \"discrete\",\n",
+      "    \"mappingColumn\" : \"degree\",\n",
+      "    \"mappingColumnType\" : \"Integer\",\n",
+      "    \"visualProperty\" : \"NODE_FILL_COLOR\",\n",
+      "    \"map\" : [ {\n",
+      "      \"key\" : \"1\",\n",
+      "      \"value\" : \"#440055\"\n",
+      "    }, {\n",
+      "      \"key\" : \"4\",\n",
+      "      \"value\" : \"#00FF11\"\n",
+      "    } ]\n",
+      "  }, {\n",
+      "    \"mappingType\" : \"passthrough\",\n",
+      "    \"mappingColumn\" : \"name\",\n",
+      "    \"mappingColumnType\" : \"String\",\n",
+      "    \"visualProperty\" : \"NODE_LABEL\"\n",
+      "  } ]\n",
+      "}\n",
+      "\n",
+      "requests.post(\"http://localhost:8080/v1/styles\", data=json.dumps(my_style), headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "metadata": {},
+       "output_type": "pyout",
+       "prompt_number": 53,
+       "text": [
+        "<Response [200]>"
+       ]
+      }
+     ],
+     "prompt_number": 53
+    }
+   ],
+   "metadata": {}
+  }
+ ]
+}
\ No newline at end of file
diff --git a/examples/python/basic/CytoscapeREST_Basic1.ipynb b/examples/python/basic/CytoscapeREST_Basic1.ipynb
new file mode 100644
index 00000000..c1429761
--- /dev/null
+++ b/examples/python/basic/CytoscapeREST_Basic1.ipynb
@@ -0,0 +1,367 @@
+{
+ "metadata": {
+  "name": "",
+  "signature": "sha256:547a7fc519ef97dbedfd1d1a0f31dda26a0310e09a4939a9a5ac0fd2aae81cbc"
+ },
+ "nbformat": 3,
+ "nbformat_minor": 0,
+ "worksheets": [
+  {
+   "cells": [
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "# Basic Workflow Part 1: Fundamentals of Cytoscape RESTful API\n",
+      "\n",
+      "## Introduction\n",
+      "This is a basic workflow how to access Cytoscape via RESTful API.\n",
+      "\n",
+      "## System Requirments\n",
+      "* Java 7+\n",
+      "* Cytoscape 3.1.1 or later\n",
+      "* Latest version of cy-rest app\n",
+      "\n",
+      "## Questions?\n",
+      "Send them to our [mailing list]()."
+     ]
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## 1. Import Python Libraries and Basic Setup\n",
+      "\n",
+      "### Dependent Libraries\n",
+      "In this tutorial, we use several popular Python libraries to make this workflow more realistic.  Since you need to access Cytoscape via RESTful API, HTTP client library is very important tool.  In this example, we use [Requests](http://docs.python-requests.org/en/latest/) library.\n",
+      "\n",
+      "Other libraries:\n",
+      "\n",
+      "* json - for JSON processing\n",
+      "* NetworkX - network generation and analysis\n",
+      "* pandas - very powerful data analysis framework for Python\n",
+      "\n",
+      "### Basic Setup for the API\n",
+      "At this point, there is only one option for the cy-rest module: port number.  By default, port number used by cy-rest module is __1234__.  To change this, you need set a global Cytoscape property from _Edit-->Preserences-->Properties..._ and add a new property __port.number__."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Import libraries\n",
+      "import requests\n",
+      "import json\n",
+      "import networkx as nx\n",
+      "import pandas as pd\n",
+      "\n",
+      "# Basic Setup\n",
+      "PORT_NUMBER = 8080\n",
+      "BASE = 'http://localhost:' + str(PORT_NUMBER) + '/v1/'\n",
+      "\n",
+      "# Header for posting data to the server\n",
+      "HEADERS = {'Content-Type': 'application/json'}"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 31
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## 2. Test Cytoscape REST API\n",
+      "First, run a simple REST call and make sure cy-rest module is running."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Get version number of Cytoscape and REST API version\n",
+      "response1 = requests.get(BASE + 'version')\n",
+      "print(response1.content)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "{ \"apiVersion\":\"1.0.0\",\"cytoscapeVersion\": \"3.1.1\"}\n"
+       ]
+      }
+     ],
+     "prompt_number": 32
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "If the method call above works fine, you are ready to go!\n",
+      "\n",
+      "## 3. Import Networks from various data sources\n",
+      "There are several ways to load networks into Cytoscape:\n",
+      "\n",
+      "* From files\n",
+      "* From web services\n",
+      "* From Cytoscape style json\n",
+      "* From edge list"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Delete all existing networks\n",
+      "requests.delete(BASE + 'networks')\n",
+      "\n",
+      "# Array of data source. \n",
+      "network_files = [\n",
+      "    # SIF file on a web server\n",
+      "    'http://chianti.ucsd.edu/cytoscape-data/galFiltered.sif',\n",
+      "    # PSICQUIC web service query\n",
+      "    'http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/interactor/brca1_human?format=xml25'\n",
+      "]\n",
+      "\n",
+      "response2 = requests.post(BASE + 'networks?source=url', data=json.dumps(network_files), headers=HEADERS)\n",
+      "new_networks = json.loads(response2.content)\n",
+      "print(json.dumps(new_networks, indent=2))"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "[\n",
+        "  {\n",
+        "    \"source\": \"http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/interactor/brca1_human?format=xml25\", \n",
+        "    \"networkSUID\": [\n",
+        "      74052\n",
+        "    ]\n",
+        "  }, \n",
+        "  {\n",
+        "    \"source\": \"http://chianti.ucsd.edu/cytoscape-data/galFiltered.sif\", \n",
+        "    \"networkSUID\": [\n",
+        "      72638\n",
+        "    ]\n",
+        "  }\n",
+        "]\n"
+       ]
+      }
+     ],
+     "prompt_number": 58
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# From Cytoscape.js JSON\n",
+      "\n",
+      "# This is the basic structure of network JSON object:\n",
+      "small_network = {\n",
+      "        'data': {\n",
+      "            'name': 'manually generated empty network'\n",
+      "        },\n",
+      "        'elements': {\n",
+      "            'nodes':[],\n",
+      "            'edges':[]\n",
+      "        }\n",
+      "}\n",
+      "\n",
+      "response3 = requests.post(BASE + 'networks?collection=My%20Collection', data=json.dumps(small_network), headers=HEADERS)\n",
+      "\n",
+      "# From edgelist\n",
+      "edge_list = '1 2\\n' + '2 3\\n' + '1 3'\n",
+      "response3 = requests.post(BASE + 'networks?format=edgelist', data=edge_list, headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 57
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Get the node table as JSON\n",
+      "\n",
+      "# Or CSV\n",
+      "\n",
+      "# Convert it as DataFrame"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": []
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## Import & Generate Data in Python\n",
+      "\n",
+      "### Generate scale-free graphs with NetworkX"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "graphs = []\n",
+      "\n",
+      "# Create 20 small randome networks\n",
+      "for i in range(20):\n",
+      "    # Generate scale-free graph\n",
+      "    g = nx.scale_free_graph(50);\n",
+      "    \n",
+      "    # Perform simple graph analysis\n",
+      "    \n",
+      "    # Node statistics\n",
+      "    bc = nx.betweenness_centrality(g)\n",
+      "    degree = nx.degree(g)\n",
+      "    cc = nx.closeness_centrality(g)\n",
+      "    nx.set_node_attributes(g, 'betweenness', bc)\n",
+      "    nx.set_node_attributes(g, 'closeness', cc)\n",
+      "    nx.set_node_attributes(g, 'degree', degree)\n",
+      "    \n",
+      "    # Network statistics\n",
+      "    g.graph[\"avg_shortest_path_len\"] = nx.average_shortest_path_length(g)\n",
+      "    g.graph[\"density\"] = nx.density(g)\n",
+      "    graphs.append(g)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 50
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "### Send all network models to Cytoscape"
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Remove all networks\n",
+      "requests.delete(BASE + 'networks')\n",
+      "\n",
+      "import cytoscape.viewer as cy\n",
+      "\n",
+      "for graph in graphs:\n",
+      "    cyjs_network = cy.from_networkx(graph)\n",
+      "    res1 = requests.post(BASE + 'networks', data=json.dumps(cyjs_network), headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [],
+     "prompt_number": 52
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## (Now graphs are in Cytoscape.  Do analysis, visualization, etc...)"
+     ]
+    },
+    {
+     "cell_type": "markdown",
+     "metadata": {},
+     "source": [
+      "## Get the visualization back to this notebook."
+     ]
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "response = requests.get(\"http://localhost:8080/v1/networks?format=SUID\")\n",
+      "network_list = json.loads(response.content)\n",
+      "print(network_list)\n",
+      "\n",
+      "network_views = []\n",
+      "for suid in network_list:\n",
+      "    response2 = requests.get(\"http://localhost:8080/v1/networks/\" + str(suid) + \"/views/first\")\n",
+      "    network_views.append(json.loads(response2.content))"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "output_type": "stream",
+       "stream": "stdout",
+       "text": [
+        "[67314, 68616, 68922, 67654, 68334, 72226, 66680, 69952, 71912, 69292, 67984, 71240, 65946, 70886, 66996, 69640, 66328, 70578, 71576, 70274]\n"
+       ]
+      }
+     ],
+     "prompt_number": 55
+    },
+    {
+     "cell_type": "code",
+     "collapsed": false,
+     "input": [
+      "# Visual Style can be a simple Python object!\n",
+      "\n",
+      "my_style = {\n",
+      "  \"title\" : \"My Style 10\",\n",
+      "  \"defaults\" : [ {\n",
+      "    \"visualProperty\" : \"EDGE_WIDTH\",\n",
+      "    \"value\" : 11.0\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"EDGE_STROKE_UNSELECTED_PAINT\",\n",
+      "    \"value\" : \"#00ddff\"\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"NODE_WIDTH\",\n",
+      "    \"value\" : 20\n",
+      "  }, {\n",
+      "    \"visualProperty\" : \"NODE_HEIGHT\",\n",
+      "    \"value\" : 20\n",
+      "  }],\n",
+      "  \"mappings\" : [ {\n",
+      "    \"mappingType\" : \"discrete\",\n",
+      "    \"mappingColumn\" : \"degree\",\n",
+      "    \"mappingColumnType\" : \"Integer\",\n",
+      "    \"visualProperty\" : \"NODE_FILL_COLOR\",\n",
+      "    \"map\" : [ {\n",
+      "      \"key\" : \"1\",\n",
+      "      \"value\" : \"#440055\"\n",
+      "    }, {\n",
+      "      \"key\" : \"4\",\n",
+      "      \"value\" : \"#00FF11\"\n",
+      "    } ]\n",
+      "  }, {\n",
+      "    \"mappingType\" : \"passthrough\",\n",
+      "    \"mappingColumn\" : \"name\",\n",
+      "    \"mappingColumnType\" : \"String\",\n",
+      "    \"visualProperty\" : \"NODE_LABEL\"\n",
+      "  } ]\n",
+      "}\n",
+      "\n",
+      "requests.post(\"http://localhost:8080/v1/styles\", data=json.dumps(my_style), headers=HEADERS)"
+     ],
+     "language": "python",
+     "metadata": {},
+     "outputs": [
+      {
+       "metadata": {},
+       "output_type": "pyout",
+       "prompt_number": 53,
+       "text": [
+        "<Response [200]>"
+       ]
+      }
+     ],
+     "prompt_number": 53
+    }
+   ],
+   "metadata": {}
+  }
+ ]
+}
\ No newline at end of file
diff --git a/examples/python/basic/cytoscape/__init__.py b/examples/python/basic/cytoscape/__init__.py
new file mode 100644
index 00000000..ee2e8b9e
--- /dev/null
+++ b/examples/python/basic/cytoscape/__init__.py
@@ -0,0 +1,15 @@
+import os
+
+JS_LOADER_FILE ="loader.js"
+
+# Initialize
+def init():
+    from IPython.core.display import display, Javascript
+
+    path = os.path.abspath(os.path.dirname(__file__)) + "/" + JS_LOADER_FILE
+    js_loader = open(path).read()
+    return display(Javascript(js_loader))
+
+
+# Load Cytoscape.js and dependent libraries
+init()
\ No newline at end of file
diff --git a/examples/python/basic/cytoscape/__init__.pyc b/examples/python/basic/cytoscape/__init__.pyc
new file mode 100644
index 00000000..2c634c5d
Binary files /dev/null and b/examples/python/basic/cytoscape/__init__.pyc differ
diff --git a/examples/python/basic/cytoscape/arbor.js b/examples/python/basic/cytoscape/arbor.js
new file mode 100755
index 00000000..b6ae116d
--- /dev/null
+++ b/examples/python/basic/cytoscape/arbor.js
@@ -0,0 +1,67 @@
+//
+//  arbor.js - version 0.91
+//  a graph vizualization toolkit
+//
+//  Copyright (c) 2011 Samizdat Drafting Co.
+//  Physics code derived from springy.js, copyright (c) 2010 Dennis Hotson
+// 
+//  Permission is hereby granted, free of charge, to any person
+//  obtaining a copy of this software and associated documentation
+//  files (the "Software"), to deal in the Software without
+//  restriction, including without limitation the rights to use,
+//  copy, modify, merge, publish, distribute, sublicense, and/or sell
+//  copies of the Software, and to permit persons to whom the
+//  Software is furnished to do so, subject to the following
+//  conditions:
+// 
+//  The above copyright notice and this permission notice shall be
+//  included in all copies or substantial portions of the Software.
+// 
+//  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+//  EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
+//  OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+//  NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
+//  HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+//  WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
+//  FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+//  OTHER DEALINGS IN THE SOFTWARE.
+//
+
+(function($){
+
+  /*        etc.js */  var trace=function(msg){if(typeof(window)=="undefined"||!window.console){return}var len=arguments.length;var args=[];for(var i=0;i<len;i++){args.push("arguments["+i+"]")}eval("console.log("+args.join(",")+")")};var dirname=function(a){var b=a.replace(/^\/?(.*?)\/?$/,"$1").split("/");b.pop();return"/"+b.join("/")};var basename=function(b){var c=b.replace(/^\/?(.*?)\/?$/,"$1").split("/");var a=c.pop();if(a==""){return null}else{return a}};var _ordinalize_re=/(\d)(?=(\d\d\d)+(?!\d))/g;var ordinalize=function(a){var b=""+a;if(a<11000){b=(""+a).replace(_ordinalize_re,"$1,")}else{if(a<1000000){b=Math.floor(a/1000)+"k"}else{if(a<1000000000){b=(""+Math.floor(a/1000)).replace(_ordinalize_re,"$1,")+"m"}}}return b};var nano=function(a,b){return a.replace(/\{([\w\-\.]*)}/g,function(f,c){var d=c.split("."),e=b[d.shift()];$.each(d,function(){if(e.hasOwnProperty(this)){e=e[this]}else{e=f}});return e})};var objcopy=function(a){if(a===undefined){return undefined}if(a===null){return null}if(a.parentNode){return a}switch(typeof a){case"string":return a.substring(0);break;case"number":return a+0;break;case"boolean":return a===true;break}var b=($.isArray(a))?[]:{};$.each(a,function(d,c){b[d]=objcopy(c)});return b};var objmerge=function(d,b){d=d||{};b=b||{};var c=objcopy(d);for(var a in b){c[a]=b[a]}return c};var objcmp=function(e,c,d){if(!e||!c){return e===c}if(typeof e!=typeof c){return false}if(typeof e!="object"){return e===c}else{if($.isArray(e)){if(!($.isArray(c))){return false}if(e.length!=c.length){return false}}else{var h=[];for(var f in e){if(e.hasOwnProperty(f)){h.push(f)}}var g=[];for(var f in c){if(c.hasOwnProperty(f)){g.push(f)}}if(!d){h.sort();g.sort()}if(h.join(",")!==g.join(",")){return false}}var i=true;$.each(e,function(a){var b=objcmp(e[a],c[a]);i=i&&b;if(!i){return false}});return i}};var objkeys=function(b){var a=[];$.each(b,function(d,c){if(b.hasOwnProperty(d)){a.push(d)}});return a};var objcontains=function(c){if(!c||typeof c!="object"){return false}for(var b=1,a=arguments.length;b<a;b++){if(c.hasOwnProperty(arguments[b])){return true}}return false};var uniq=function(b){var a=b.length;var d={};for(var c=0;c<a;c++){d[b[c]]=true}return objkeys(d)};var arbor_path=function(){var a=$("script").map(function(b){var c=$(this).attr("src");if(!c){return}if(c.match(/arbor[^\/\.]*.js|dev.js/)){return c.match(/.*\//)||"/"}});if(a.length>0){return a[0]}else{return null}};
+  /*     kernel.js */  var Kernel=function(b){var k=window.location.protocol=="file:"&&navigator.userAgent.toLowerCase().indexOf("chrome")>-1;var a=(window.Worker!==undefined&&!k);var i=null;var c=null;var f=[];f.last=new Date();var l=null;var e=null;var d=null;var h=null;var g=false;var j={system:b,tween:null,nodes:{},init:function(){if(typeof(Tween)!="undefined"){c=Tween()}else{if(typeof(arbor.Tween)!="undefined"){c=arbor.Tween()}else{c={busy:function(){return false},tick:function(){return true},to:function(){trace("Please include arbor-tween.js to enable tweens");c.to=function(){};return}}}}j.tween=c;var m=b.parameters();if(a){trace("using web workers");l=setInterval(j.screenUpdate,m.timeout);i=new Worker(arbor_path()+"arbor.js");i.onmessage=j.workerMsg;i.onerror=function(n){trace("physics:",n)};i.postMessage({type:"physics",physics:objmerge(m,{timeout:Math.ceil(m.timeout)})})}else{trace("couldn't use web workers, be careful...");i=Physics(m.dt,m.stiffness,m.repulsion,m.friction,j.system._updateGeometry);j.start()}return j},graphChanged:function(m){if(a){i.postMessage({type:"changes",changes:m})}else{i._update(m)}j.start()},particleModified:function(n,m){if(a){i.postMessage({type:"modify",id:n,mods:m})}else{i.modifyNode(n,m)}j.start()},physicsModified:function(m){if(!isNaN(m.timeout)){if(a){clearInterval(l);l=setInterval(j.screenUpdate,m.timeout)}else{clearInterval(d);d=null}}if(a){i.postMessage({type:"sys",param:m})}else{i.modifyPhysics(m)}j.start()},workerMsg:function(n){var m=n.data.type;if(m=="geometry"){j.workerUpdate(n.data)}else{trace("physics:",n.data)}},_lastPositions:null,workerUpdate:function(m){j._lastPositions=m;j._lastBounds=m.bounds},_lastFrametime:new Date().valueOf(),_lastBounds:null,_currentRenderer:null,screenUpdate:function(){var n=new Date().valueOf();var m=false;if(j._lastPositions!==null){j.system._updateGeometry(j._lastPositions);j._lastPositions=null;m=true}if(c&&c.busy()){m=true}if(j.system._updateBounds(j._lastBounds)){m=true}if(m){var o=j.system.renderer;if(o!==undefined){if(o!==e){o.init(j.system);e=o}if(c){c.tick()}o.redraw();var p=f.last;f.last=new Date();f.push(f.last-p);if(f.length>50){f.shift()}}}},physicsUpdate:function(){if(c){c.tick()}i.tick();var n=j.system._updateBounds();if(c&&c.busy()){n=true}var o=j.system.renderer;var m=new Date();var o=j.system.renderer;if(o!==undefined){if(o!==e){o.init(j.system);e=o}o.redraw({timestamp:m})}var q=f.last;f.last=m;f.push(f.last-q);if(f.length>50){f.shift()}var p=i.systemEnergy();if((p.mean+p.max)/2<0.05){if(h===null){h=new Date().valueOf()}if(new Date().valueOf()-h>1000){clearInterval(d);d=null}else{}}else{h=null}},fps:function(n){if(n!==undefined){var q=1000/Math.max(1,targetFps);j.physicsModified({timeout:q})}var r=0;for(var p=0,o=f.length;p<o;p++){r+=f[p]}var m=r/Math.max(1,f.length);if(!isNaN(m)){return Math.round(1000/m)}else{return 0}},start:function(m){if(d!==null){return}if(g&&!m){return}g=false;if(a){i.postMessage({type:"start"})}else{h=null;d=setInterval(j.physicsUpdate,j.system.parameters().timeout)}},stop:function(){g=true;if(a){i.postMessage({type:"stop"})}else{if(d!==null){clearInterval(d);d=null}}}};return j.init()};
+  /*      atoms.js */  var Node=function(a){this._id=_nextNodeId++;this.data=a||{};this._mass=(a.mass!==undefined)?a.mass:1;this._fixed=(a.fixed===true)?true:false;this._p=new Point((typeof(a.x)=="number")?a.x:null,(typeof(a.y)=="number")?a.y:null);delete this.data.x;delete this.data.y;delete this.data.mass;delete this.data.fixed};var _nextNodeId=1;var Edge=function(b,c,a){this._id=_nextEdgeId--;this.source=b;this.target=c;this.length=(a.length!==undefined)?a.length:1;this.data=(a!==undefined)?a:{};delete this.data.length};var _nextEdgeId=-1;var Particle=function(a,b){this.p=a;this.m=b;this.v=new Point(0,0);this.f=new Point(0,0)};Particle.prototype.applyForce=function(a){this.f=this.f.add(a.divide(this.m))};var Spring=function(c,b,d,a){this.point1=c;this.point2=b;this.length=d;this.k=a};Spring.prototype.distanceToParticle=function(a){var c=that.point2.p.subtract(that.point1.p).normalize().normal();var b=a.p.subtract(that.point1.p);return Math.abs(b.x*c.x+b.y*c.y)};var Point=function(a,b){if(a&&a.hasOwnProperty("y")){b=a.y;a=a.x}this.x=a;this.y=b};Point.random=function(a){a=(a!==undefined)?a:5;return new Point(2*a*(Math.random()-0.5),2*a*(Math.random()-0.5))};Point.prototype={exploded:function(){return(isNaN(this.x)||isNaN(this.y))},add:function(a){return new Point(this.x+a.x,this.y+a.y)},subtract:function(a){return new Point(this.x-a.x,this.y-a.y)},multiply:function(a){return new Point(this.x*a,this.y*a)},divide:function(a){return new Point(this.x/a,this.y/a)},magnitude:function(){return Math.sqrt(this.x*this.x+this.y*this.y)},normal:function(){return new Point(-this.y,this.x)},normalize:function(){return this.divide(this.magnitude())}};
+  /*     system.js */  var ParticleSystem=function(d,r,f,g,v,m,s){var k=[];var i=null;var l=0;var w=null;var o=0.04;var j=[20,20,20,20];var p=null;var q=null;if(typeof r=="object"){var u=r;f=u.friction;d=u.repulsion;v=u.fps;m=u.dt;r=u.stiffness;g=u.gravity;s=u.precision}f=isNaN(f)?0.5:f;d=isNaN(d)?1000:d;v=isNaN(v)?55:v;r=isNaN(r)?600:r;m=isNaN(m)?0.02:m;s=isNaN(s)?0.6:s;g=(g===true);var t=(v!==undefined)?1000/v:1000/50;var b={repulsion:d,stiffness:r,friction:f,dt:m,gravity:g,precision:s,timeout:t};var a;var c={renderer:null,tween:null,nodes:{},edges:{},adjacency:{},names:{},kernel:null};var h={parameters:function(x){if(x!==undefined){if(!isNaN(x.precision)){x.precision=Math.max(0,Math.min(1,x.precision))}$.each(b,function(z,y){if(x[z]!==undefined){b[z]=x[z]}});c.kernel.physicsModified(x)}return b},fps:function(x){if(x===undefined){return c.kernel.fps()}else{h.parameters({timeout:1000/(x||50)})}},start:function(){c.kernel.start()},stop:function(){c.kernel.stop()},addNode:function(A,D){D=D||{};var E=c.names[A];if(E){E.data=D;return E}else{if(A!=undefined){var z=(D.x!=undefined)?D.x:null;var F=(D.y!=undefined)?D.y:null;var C=(D.fixed)?1:0;var B=new Node(D);B.name=A;B._state=c;c.names[A]=B;c.nodes[B._id]=B;k.push({t:"addNode",id:B._id,m:B.mass,x:z,y:F,f:C});h._notify();return B}}},pruneNode:function(y){var x=h.getNode(y);if(typeof(c.nodes[x._id])!=="undefined"){delete c.nodes[x._id];delete c.names[x.name]}$.each(c.edges,function(A,z){if(z.source._id===x._id||z.target._id===x._id){h.pruneEdge(z)}});k.push({t:"dropNode",id:x._id});h._notify()},getNode:function(x){if(x._id!==undefined){return x}else{if(typeof x=="string"||typeof x=="number"){return c.names[x]}}},eachNode:function(x){$.each(c.nodes,function(A,z){if(z._p.x==null||z._p.y==null){return}var y=(w!==null)?h.toScreen(z._p):z._p;x.call(h,z,y)})},addEdge:function(B,C,A){B=h.getNode(B)||h.addNode(B);C=h.getNode(C)||h.addNode(C);A=A||{};var z=new Edge(B,C,A);var D=B._id;var E=C._id;c.adjacency[D]=c.adjacency[D]||{};c.adjacency[D][E]=c.adjacency[D][E]||[];var y=(c.adjacency[D][E].length>0);if(y){$.extend(c.adjacency[D][E].data,z.data);return}else{c.edges[z._id]=z;c.adjacency[D][E].push(z);var x=(z.length!==undefined)?z.length:1;k.push({t:"addSpring",id:z._id,fm:D,to:E,l:x});h._notify()}return z},pruneEdge:function(C){k.push({t:"dropSpring",id:C._id});delete c.edges[C._id];for(var z in c.adjacency){for(var D in c.adjacency[z]){var A=c.adjacency[z][D];for(var B=A.length-1;B>=0;B--){if(c.adjacency[z][D][B]._id===C._id){c.adjacency[z][D].splice(B,1)}}}}h._notify()},getEdges:function(y,x){y=h.getNode(y);x=h.getNode(x);if(!y||!x){return[]}if(typeof(c.adjacency[y._id])!=="undefined"&&typeof(c.adjacency[y._id][x._id])!=="undefined"){return 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B=h.getNode(A);if(B){B.data=z}else{x.added.nodes.push(h.addNode(A,z))}c.kernel.start()})}if(y.edges){$.each(y.edges,function(B,z){var A=h.getNode(B);if(!A){x.added.nodes.push(h.addNode(B,{}))}$.each(z,function(F,C){var E=h.getNode(F);if(!E){x.added.nodes.push(h.addNode(F,{}))}var D=h.getEdges(B,F);if(D.length>0){D[0].data=C}else{x.added.edges.push(h.addEdge(B,F,C))}})})}return x},merge:function(y){var x={added:{nodes:[],edges:[]},dropped:{nodes:[],edges:[]}};$.each(c.edges,function(C,B){if((y.edges[B.source.name]===undefined||y.edges[B.source.name][B.target.name]===undefined)){h.pruneEdge(B);x.dropped.edges.push(B)}});var A=h.prune(function(C,B){if(y.nodes[C.name]===undefined){x.dropped.nodes.push(C);return true}});var z=h.graft(y);x.added.nodes=x.added.nodes.concat(z.added.nodes);x.added.edges=x.added.edges.concat(z.added.edges);x.dropped.nodes=x.dropped.nodes.concat(A.dropped.nodes);x.dropped.edges=x.dropped.edges.concat(A.dropped.edges);return x},tweenNode:function(A,x,z){var y=h.getNode(A);if(y){c.tween.to(y,x,z)}},tweenEdge:function(y,x,B,A){if(A===undefined){h._tweenEdge(y,x,B)}else{var z=h.getEdges(y,x);$.each(z,function(C,D){h._tweenEdge(D,B,A)})}},_tweenEdge:function(y,x,z){if(y&&y._id!==undefined){c.tween.to(y,x,z)}},_updateGeometry:function(A){if(A!=undefined){var x=(A.epoch<l);a=A.energy;var B=A.geometry;if(B!==undefined){for(var z=0,y=B.length/3;z<y;z++){var C=B[3*z];if(x&&c.nodes[C]==undefined){continue}c.nodes[C]._p.x=B[3*z+1];c.nodes[C]._p.y=B[3*z+2]}}}},screen:function(x){if(x==undefined){return{size:(w)?objcopy(w):undefined,padding:j.concat(),step:o}}if(x.size!==undefined){h.screenSize(x.size.width,x.size.height)}if(!isNaN(x.step)){h.screenStep(x.step)}if(x.padding!==undefined){h.screenPadding(x.padding)}},screenSize:function(x,y){w={width:x,height:y};h._updateBounds()},screenPadding:function(A,B,x,y){if($.isArray(A)){trbl=A}else{trbl=[A,B,x,y]}var C=trbl[0];var z=trbl[1];var D=trbl[2];if(z===undefined){trbl=[C,C,C,C]}else{if(D==undefined){trbl=[C,z,C,z]}}j=trbl},screenStep:function(x){o=x},toScreen:function(z){if(!p||!w){return}var y=j||[0,0,0,0];var x=p.bottomright.subtract(p.topleft);var B=y[3]+z.subtract(p.topleft).divide(x.x).x*(w.width-(y[1]+y[3]));var A=y[0]+z.subtract(p.topleft).divide(x.y).y*(w.height-(y[0]+y[2]));return arbor.Point(B,A)},fromScreen:function(B){if(!p||!w){return}var A=j||[0,0,0,0];var z=p.bottomright.subtract(p.topleft);var y=(B.x-A[3])/(w.width-(A[1]+A[3]))*z.x+p.topleft.x;var x=(B.y-A[0])/(w.height-(A[0]+A[2]))*z.y+p.topleft.y;return arbor.Point(y,x)},_updateBounds:function(y){if(w===null){return}if(y){q=y}else{q=h.bounds()}var B=new Point(q.bottomright.x,q.bottomright.y);var A=new Point(q.topleft.x,q.topleft.y);var D=B.subtract(A);var x=A.add(D.divide(2));var z=4;var F=new Point(Math.max(D.x,z),Math.max(D.y,z));q.topleft=x.subtract(F.divide(2));q.bottomright=x.add(F.divide(2));if(!p){if($.isEmptyObject(c.nodes)){return false}p=q;return true}var E=o;_newBounds={bottomright:p.bottomright.add(q.bottomright.subtract(p.bottomright).multiply(E)),topleft:p.topleft.add(q.topleft.subtract(p.topleft).multiply(E))};var C=new Point(p.topleft.subtract(_newBounds.topleft).magnitude(),p.bottomright.subtract(_newBounds.bottomright).magnitude());if(C.x*w.width>1||C.y*w.height>1){p=_newBounds;return true}else{return false}},energy:function(){return a},bounds:function(){var y=null;var x=null;$.each(c.nodes,function(B,A){if(!y){y=new Point(A._p);x=new Point(A._p);return}var z=A._p;if(z.x===null||z.y===null){return}if(z.x>y.x){y.x=z.x}if(z.y>y.y){y.y=z.y}if(z.x<x.x){x.x=z.x}if(z.y<x.y){x.y=z.y}});if(y&&x){return{bottomright:y,topleft:x}}else{return{topleft:new Point(-1,-1),bottomright:new Point(1,1)}}},nearest:function(z){if(w!==null){z=h.fromScreen(z)}var y={node:null,point:null,distance:null};var x=h;$.each(c.nodes,function(D,A){var B=A._p;if(B.x===null||B.y===null){return}var C=B.subtract(z).magnitude();if(y.distance===null||C<y.distance){y={node:A,point:B,distance:C};if(w!==null){y.screenPoint=h.toScreen(B)}}});if(y.node){if(w!==null){y.distance=h.toScreen(y.node.p).subtract(h.toScreen(z)).magnitude()}return y}else{return null}},_notify:function(){if(i===null){l++}else{clearTimeout(i)}i=setTimeout(h._synchronize,20)},_synchronize:function(){if(k.length>0){c.kernel.graphChanged(k);k=[];i=null}}};c.kernel=Kernel(h);c.tween=c.kernel.tween||null;var e=(window.__defineGetter__==null||window.__defineSetter__==null)?function(y,x,z){if(!y.hasOwnProperty(x)){Object.defineProperty(y,x,z)}}:function(y,x,z){if(z.get){y.__defineGetter__(x,z.get)}if(z.set){y.__defineSetter__(x,z.set)}};var n=function(x){this._n=x;this._state=c};n.prototype=new Point();e(n.prototype,"x",{get:function(){return this._n._p.x},set:function(x){this._state.kernel.particleModified(this._n._id,{x:x})}});e(n.prototype,"y",{get:function(){return this._n._p.y},set:function(x){this._state.kernel.particleModified(this._n._id,{y:x})}});e(Node.prototype,"p",{get:function(){return new n(this)},set:function(x){this._p.x=x.x;this._p.y=x.y;this._state.kernel.particleModified(this._id,{x:x.x,y:x.y})}});e(Node.prototype,"mass",{get:function(){return this._mass},set:function(x){this._mass=x;this._state.kernel.particleModified(this._id,{m:x})}});e(Node.prototype,"tempMass",{set:function(x){this._state.kernel.particleModified(this._id,{_m:x})}});e(Node.prototype,"fixed",{get:function(){return this._fixed},set:function(x){this._fixed=x;this._state.kernel.particleModified(this._id,{f:x?1:0})}});return h};
+  /* barnes-hut.js */  var BarnesHutTree=function(){var b=[];var a=0;var e=null;var d=0.5;var c={init:function(g,h,f){d=f;a=0;e=c._newBranch();e.origin=g;e.size=h.subtract(g)},insert:function(j){var f=e;var g=[j];while(g.length){var h=g.shift();var m=h._m||h.m;var p=c._whichQuad(h,f);if(f[p]===undefined){f[p]=h;f.mass+=m;if(f.p){f.p=f.p.add(h.p.multiply(m))}else{f.p=h.p.multiply(m)}}else{if("origin" in f[p]){f.mass+=(m);if(f.p){f.p=f.p.add(h.p.multiply(m))}else{f.p=h.p.multiply(m)}f=f[p];g.unshift(h)}else{var l=f.size.divide(2);var n=new Point(f.origin);if(p[0]=="s"){n.y+=l.y}if(p[1]=="e"){n.x+=l.x}var o=f[p];f[p]=c._newBranch();f[p].origin=n;f[p].size=l;f.mass=m;f.p=h.p.multiply(m);f=f[p];if(o.p.x===h.p.x&&o.p.y===h.p.y){var k=l.x*0.08;var i=l.y*0.08;o.p.x=Math.min(n.x+l.x,Math.max(n.x,o.p.x-k/2+Math.random()*k));o.p.y=Math.min(n.y+l.y,Math.max(n.y,o.p.y-i/2+Math.random()*i))}g.push(o);g.unshift(h)}}}},applyForces:function(m,g){var f=[e];while(f.length){node=f.shift();if(node===undefined){continue}if(m===node){continue}if("f" in node){var k=m.p.subtract(node.p);var l=Math.max(1,k.magnitude());var i=((k.magnitude()>0)?k:Point.random(1)).normalize();m.applyForce(i.multiply(g*(node._m||node.m)).divide(l*l))}else{var j=m.p.subtract(node.p.divide(node.mass)).magnitude();var h=Math.sqrt(node.size.x*node.size.y);if(h/j>d){f.push(node.ne);f.push(node.nw);f.push(node.se);f.push(node.sw)}else{var k=m.p.subtract(node.p.divide(node.mass));var l=Math.max(1,k.magnitude());var i=((k.magnitude()>0)?k:Point.random(1)).normalize();m.applyForce(i.multiply(g*(node.mass)).divide(l*l))}}}},_whichQuad:function(i,f){if(i.p.exploded()){return null}var h=i.p.subtract(f.origin);var g=f.size.divide(2);if(h.y<g.y){if(h.x<g.x){return"nw"}else{return"ne"}}else{if(h.x<g.x){return"sw"}else{return"se"}}},_newBranch:function(){if(b[a]){var f=b[a];f.ne=f.nw=f.se=f.sw=undefined;f.mass=0;delete f.p}else{f={origin:null,size:null,nw:undefined,ne:undefined,sw:undefined,se:undefined,mass:0};b[a]=f}a++;return f}};return c};
+  /*    physics.js */  var Physics=function(a,m,n,e,h){var f=BarnesHutTree();var c={particles:{},springs:{}};var l={particles:{}};var o=[];var k=[];var d=0;var b={sum:0,max:0,mean:0};var g={topleft:new Point(-1,-1),bottomright:new Point(1,1)};var j=1000;var i={stiffness:(m!==undefined)?m:1000,repulsion:(n!==undefined)?n:600,friction:(e!==undefined)?e:0.3,gravity:false,dt:(a!==undefined)?a:0.02,theta:0.4,init:function(){return i},modifyPhysics:function(p){$.each(["stiffness","repulsion","friction","gravity","dt","precision"],function(r,s){if(p[s]!==undefined){if(s=="precision"){i.theta=1-p[s];return}i[s]=p[s];if(s=="stiffness"){var q=p[s];$.each(c.springs,function(u,t){t.k=q})}}})},addNode:function(u){var t=u.id;var q=u.m;var p=g.bottomright.x-g.topleft.x;var s=g.bottomright.y-g.topleft.y;var r=new Point((u.x!=null)?u.x:g.topleft.x+p*Math.random(),(u.y!=null)?u.y:g.topleft.y+s*Math.random());c.particles[t]=new Particle(r,q);c.particles[t].connections=0;c.particles[t].fixed=(u.f===1);l.particles[t]=c.particles[t];o.push(c.particles[t])},dropNode:function(s){var r=s.id;var q=c.particles[r];var p=$.inArray(q,o);if(p>-1){o.splice(p,1)}delete c.particles[r];delete l.particles[r]},modifyNode:function(r,p){if(r in c.particles){var q=c.particles[r];if("x" in p){q.p.x=p.x}if("y" in p){q.p.y=p.y}if("m" in p){q.m=p.m}if("f" in p){q.fixed=(p.f===1)}if("_m" in p){if(q._m===undefined){q._m=q.m}q.m=p._m}}},addSpring:function(t){var s=t.id;var p=t.l;var r=c.particles[t.fm];var q=c.particles[t.to];if(r!==undefined&&q!==undefined){c.springs[s]=new Spring(r,q,p,i.stiffness);k.push(c.springs[s]);r.connections++;q.connections++;delete l.particles[t.fm];delete l.particles[t.to]}},dropSpring:function(s){var r=s.id;var q=c.springs[r];q.point1.connections--;q.point2.connections--;var p=$.inArray(q,k);if(p>-1){k.splice(p,1)}delete c.springs[r]},_update:function(p){d++;$.each(p,function(q,r){if(r.t in i){i[r.t](r)}});return d},tick:function(){i.tendParticles();i.eulerIntegrator(i.dt);i.tock()},tock:function(){var p=[];$.each(c.particles,function(r,q){p.push(r);p.push(q.p.x);p.push(q.p.y)});if(h){h({geometry:p,epoch:d,energy:b,bounds:g})}},tendParticles:function(){$.each(c.particles,function(q,p){if(p._m!==undefined){if(Math.abs(p.m-p._m)<1){p.m=p._m;delete p._m}else{p.m*=0.98}}p.v.x=p.v.y=0})},eulerIntegrator:function(p){if(i.repulsion>0){if(i.theta>0){i.applyBarnesHutRepulsion()}else{i.applyBruteForceRepulsion()}}if(i.stiffness>0){i.applySprings()}i.applyCenterDrift();if(i.gravity){i.applyCenterGravity()}i.updateVelocity(p);i.updatePosition(p)},applyBruteForceRepulsion:function(){$.each(c.particles,function(q,p){$.each(c.particles,function(s,r){if(p!==r){var u=p.p.subtract(r.p);var v=Math.max(1,u.magnitude());var t=((u.magnitude()>0)?u:Point.random(1)).normalize();p.applyForce(t.multiply(i.repulsion*(r._m||r.m)*0.5).divide(v*v*0.5));r.applyForce(t.multiply(i.repulsion*(p._m||p.m)*0.5).divide(v*v*-0.5))}})})},applyBarnesHutRepulsion:function(){if(!g.topleft||!g.bottomright){return}var q=new Point(g.bottomright);var p=new Point(g.topleft);f.init(p,q,i.theta);$.each(c.particles,function(s,r){f.insert(r)});$.each(c.particles,function(s,r){f.applyForces(r,i.repulsion)})},applySprings:function(){$.each(c.springs,function(t,p){var s=p.point2.p.subtract(p.point1.p);var q=p.length-s.magnitude();var r=((s.magnitude()>0)?s:Point.random(1)).normalize();p.point1.applyForce(r.multiply(p.k*q*-0.5));p.point2.applyForce(r.multiply(p.k*q*0.5))})},applyCenterDrift:function(){var q=0;var r=new Point(0,0);$.each(c.particles,function(t,s){r.add(s.p);q++});if(q==0){return}var p=r.divide(-q);$.each(c.particles,function(t,s){s.applyForce(p)})},applyCenterGravity:function(){$.each(c.particles,function(r,p){var q=p.p.multiply(-1);p.applyForce(q.multiply(i.repulsion/100))})},updateVelocity:function(p){$.each(c.particles,function(t,q){if(q.fixed){q.v=new Point(0,0);q.f=new Point(0,0);return}var s=q.v.magnitude();q.v=q.v.add(q.f.multiply(p)).multiply(1-i.friction);q.f.x=q.f.y=0;var r=q.v.magnitude();if(r>j){q.v=q.v.divide(r*r)}})},updatePosition:function(q){var r=0,p=0,u=0;var t=null;var s=null;$.each(c.particles,function(w,v){v.p=v.p.add(v.v.multiply(q));var x=v.v.magnitude();var z=x*x;r+=z;p=Math.max(z,p);u++;if(!t){t=new Point(v.p.x,v.p.y);s=new Point(v.p.x,v.p.y);return}var y=v.p;if(y.x===null||y.y===null){return}if(y.x>t.x){t.x=y.x}if(y.y>t.y){t.y=y.y}if(y.x<s.x){s.x=y.x}if(y.y<s.y){s.y=y.y}});b={sum:r,max:p,mean:r/u,n:u};g={topleft:s||new Point(-1,-1),bottomright:t||new Point(1,1)}},systemEnergy:function(p){return b}};return i.init()};var _nearParticle=function(b,c){var c=c||0;var a=b.x;var f=b.y;var e=c*2;return new Point(a-c+Math.random()*e,f-c+Math.random()*e)};
+
+  // if called as a worker thread, set up a run loop for the Physics object and bail out
+  if (typeof(window)=='undefined') return (function(){
+  /* hermetic.js */  $={each:function(d,e){if($.isArray(d)){for(var c=0,b=d.length;c<b;c++){e(c,d[c])}}else{for(var a in d){e(a,d[a])}}},map:function(a,c){var b=[];$.each(a,function(f,e){var d=c(e);if(d!==undefined){b.push(d)}});return b},extend:function(c,b){if(typeof b!="object"){return c}for(var a in b){if(b.hasOwnProperty(a)){c[a]=b[a]}}return c},isArray:function(a){if(!a){return false}return(a.constructor.toString().indexOf("Array")!=-1)},inArray:function(c,a){for(var d=0,b=a.length;d<b;d++){if(a[d]===c){return d}}return -1},isEmptyObject:function(a){if(typeof a!=="object"){return false}var b=true;$.each(a,function(c,d){b=false});return b},};
+  /*     worker.js */  var PhysicsWorker=function(){var b=20;var a=null;var d=null;var c=null;var g=[];var f=new Date().valueOf();var e={init:function(h){e.timeout(h.timeout);a=Physics(h.dt,h.stiffness,h.repulsion,h.friction,e.tock);return e},timeout:function(h){if(h!=b){b=h;if(d!==null){e.stop();e.go()}}},go:function(){if(d!==null){return}c=null;d=setInterval(e.tick,b)},stop:function(){if(d===null){return}clearInterval(d);d=null},tick:function(){a.tick();var h=a.systemEnergy();if((h.mean+h.max)/2<0.05){if(c===null){c=new Date().valueOf()}if(new Date().valueOf()-c>1000){e.stop()}else{}}else{c=null}},tock:function(h){h.type="geometry";postMessage(h)},modifyNode:function(i,h){a.modifyNode(i,h);e.go()},modifyPhysics:function(h){a.modifyPhysics(h)},update:function(h){var i=a._update(h)}};return e};var physics=PhysicsWorker();onmessage=function(a){if(!a.data.type){postMessage("¿kérnèl?");return}if(a.data.type=="physics"){var b=a.data.physics;physics.init(a.data.physics);return}switch(a.data.type){case"modify":physics.modifyNode(a.data.id,a.data.mods);break;case"changes":physics.update(a.data.changes);physics.go();break;case"start":physics.go();break;case"stop":physics.stop();break;case"sys":var b=a.data.param||{};if(!isNaN(b.timeout)){physics.timeout(b.timeout)}physics.modifyPhysics(b);physics.go();break}};
+  })()
+
+
+  arbor = (typeof(arbor)!=='undefined') ? arbor : {}
+  $.extend(arbor, {
+    // object constructors (don't use ‘new’, just call them)
+    ParticleSystem:ParticleSystem,
+    Point:function(x, y){ return new Point(x, y) },
+
+    // immutable object with useful methods
+    etc:{      
+      trace:trace,              // ƒ(msg) -> safe console logging
+      dirname:dirname,          // ƒ(path) -> leading part of path
+      basename:basename,        // ƒ(path) -> trailing part of path
+      ordinalize:ordinalize,    // ƒ(num) -> abbrev integers (and add commas)
+      objcopy:objcopy,          // ƒ(old) -> clone an object
+      objcmp:objcmp,            // ƒ(a, b, strict_ordering) -> t/f comparison
+      objkeys:objkeys,          // ƒ(obj) -> array of all keys in obj
+      objmerge:objmerge,        // ƒ(dst, src) -> like $.extend but non-destructive
+      uniq:uniq,                // ƒ(arr) -> array of unique items in arr
+      arbor_path:arbor_path,    // ƒ() -> guess the directory of the lib code
+    }
+  })
+  
+})(this.jQuery)
\ No newline at end of file
diff --git a/examples/python/basic/cytoscape/cyjs.pyc b/examples/python/basic/cytoscape/cyjs.pyc
new file mode 100644
index 00000000..54a02298
Binary files /dev/null and b/examples/python/basic/cytoscape/cyjs.pyc differ
diff --git a/examples/python/basic/cytoscape/loader.js b/examples/python/basic/cytoscape/loader.js
new file mode 100644
index 00000000..b9f3555d
--- /dev/null
+++ b/examples/python/basic/cytoscape/loader.js
@@ -0,0 +1,17 @@
+if (window['cytoscape'] === undefined) {
+    var paths = {
+        cytoscape: 'http://cytoscape.github.io/cytoscape.js/api/cytoscape.js-latest/cytoscape.min'
+    };
+
+    require.config({
+        paths: paths
+    });
+
+    require(['cytoscape'], function(cytoscape) {
+        window['cytoscape'] = cytoscape;
+
+        var event = document.createEvent("HTMLEvents");
+        event.initEvent("load_cytoscape", true, false);
+        window.dispatchEvent(event);
+    });
+}
\ No newline at end of file
diff --git a/examples/python/basic/cytoscape/main.pyc b/examples/python/basic/cytoscape/main.pyc
new file mode 100644
index 00000000..de5bb431
Binary files /dev/null and b/examples/python/basic/cytoscape/main.pyc differ
diff --git a/examples/python/basic/cytoscape/template.html b/examples/python/basic/cytoscape/template.html
new file mode 100644
index 00000000..9f849b75
--- /dev/null
+++ b/examples/python/basic/cytoscape/template.html
@@ -0,0 +1,64 @@
+<!DOCTYPE html>
+<html>
+
+<head>
+    <meta charset=utf-8 />
+    <style type="text/css">
+      body {
+          font: 14px helvetica neue, helvetica, arial, sans-serif;
+      }
+
+      #{{uuid}} {
+        height: {{widget_height}}px;
+        width: {{widget_width}}px;
+        position: absolute;
+        left: 4px;
+        top: 5px;
+        background-color: #fafafa;
+      }
+    </style>
+
+    <script>
+    (function() {
+      function render() {
+        $('#{{uuid}}').cytoscape({
+            elements: {
+                nodes: {{nodes}},
+                edges: {{edges}}
+            },
+
+            layout: {
+                name: '{{layout}}'
+            },
+
+            ready: function() {
+                window.cy = this;
+                cy.fit();
+                cy.style().fromJson({{style_json}}).update();
+            }
+        });
+      }
+
+      var before_render = function(){
+        if(window['cytoscape'] === undefined){
+          console.log("wait!");
+          window.addEventListener("load_cytoscape", before_render);
+        } else {
+          console.log("Ready to render graph...");
+          render();
+        }
+      }
+
+      before_render();
+
+    })();
+    </script>
+</head>
+
+<body>
+  <div id="{{uuid}}"></div>
+  <!-- When only #uuid div is placed on this page, the height of output-box on ipynb will be 0px. One line below will prevent that. -->
+  <div id="dammy" style="width:{{widget_width}}px;height:{{widget_height}}px">
+</body>
+
+</html>
diff --git a/examples/python/basic/cytoscape/viewer.py b/examples/python/basic/cytoscape/viewer.py
new file mode 100644
index 00000000..debf0fb3
--- /dev/null
+++ b/examples/python/basic/cytoscape/viewer.py
@@ -0,0 +1,189 @@
+import uuid
+import json
+import os
+
+######### Default Values ###########
+
+# Define default widget size
+DEF_HEIGHT = 700
+DEF_WIDTH = 1160
+
+# Default network
+DEF_NODES = [
+    { 'data': { 'id': 'Network Data' } },
+    { 'data': { 'id': 'Empty' } }
+]
+
+DEF_EDGES = [
+    { 'data': { 'id': 'is', 'source': 'Network Data', 'target': 'Empty' } }
+]
+
+DEF_LAYOUT = 'preset'
+DEF_STYLE = 'default'
+
+PRESET_LAYOUTS = {
+    'Preset': 'preset',
+    'Circle':'circle',
+    'Concentric':'concentric',
+    'Breadthfirst':'breadthfirst',
+    'Spring':'cose',
+    'Grid':'grid'
+}
+
+DEF_SCALING = 1.0
+
+HTML_TEMPLATE_FILE = 'template.html'
+
+
+def render(network, style=DEF_STYLE, layout_algorithm=DEF_LAYOUT, height=DEF_HEIGHT, width=DEF_WIDTH):
+    from jinja2 import Template
+    from IPython.core.display import display, HTML
+
+    if network==None:
+        nodes = DEF_NODES
+        edges = DEF_EDGES
+    else:
+        nodes = network['elements']['nodes']
+        edges = network['elements']['edges']
+
+    path = os.path.abspath(os.path.dirname(__file__)) + '/' + HTML_TEMPLATE_FILE
+    template = Template(open(path).read())
+    cyjs_widget = template.render(nodes = json.dumps(nodes), edges = json.dumps(edges), 
+        uuid="cy" + str(uuid.uuid4()), widget_width = str(width), widget_height = str(height), 
+        layout=layout_algorithm, style_json=json.dumps(style))
+
+    return display(HTML(cyjs_widget))
+
+# List of available layout algorithms
+def get_layouts():
+    return PRESET_LAYOUTS
+
+
+# Convert to Cytoscape.js format from NetworkX object
+def from_networkx(networkx_graph):
+    new_graph = {}
+    elements = {}
+    nodes = []
+    edges = []
+
+    nodes_x = networkx_graph.nodes();
+    edges_x = networkx_graph.edges();
+
+    # Network Attributes
+    net_attr_keys = networkx_graph.graph.keys();
+    network_data = {}
+    for net_key in net_attr_keys:
+        network_data[net_key] = networkx_graph.graph[net_key]
+    
+    new_graph['data'] = network_data
+
+    for node in nodes_x:
+        new_node = {}
+        data = {}
+        data['id'] = str(node)
+        data['name'] = str(node)
+        for key in networkx_graph.node[node].keys():
+            data[key] = networkx_graph.node[node][key]
+        new_node['data'] = data
+        nodes.append(new_node)
+
+    for edge in edges_x:
+        new_edge = {}
+        data = {}
+        data['source'] = str(edge[0])
+        data['target'] = str(edge[1])
+        
+        new_edge['data'] = data
+        edges.append(new_edge)
+
+    elements['nodes'] = nodes
+    elements['edges'] = edges
+    new_graph['elements'] = elements
+
+    return new_graph
+
+
+def from_igraph(igraph_network, layout, scale=DEF_SCALING):
+    new_graph = {}
+    elements = {}
+    nodes = []
+    edges = []
+
+    el = igraph_network.get_edgelist()
+    nodes_original = igraph_network.vs;
+
+    node_attr = igraph_network.vs.attributes()
+
+    idx = 0
+    for node in nodes_original:
+        new_node = {}
+        data = {}
+        data['id'] = str(node.index)
+        data['name'] = str(node.index)
+        for key in node_attr:
+            data[key] = node[key]
+        new_node['data'] = data
+        if layout is not None:
+            position = {}
+            position['x'] = layout[idx][0] * scale
+            position['y'] = layout[idx][1] * scale
+            new_node['position'] = position
+
+        nodes.append(new_node)
+        idx = idx + 1
+
+    for edge in el:
+        new_edge = {}
+        data = {}
+        data['source'] = str(edge[0])
+        data['target'] = str(edge[1])
+        new_edge['data'] = data
+        edges.append(new_edge)
+
+    elements['nodes'] = nodes
+    elements['edges'] = edges
+    new_graph['elements'] = elements
+
+    return new_graph
+
+def from_sgraph(sgraph):
+    new_graph = {}
+    elements = {}
+    nodes = []
+    edges = []
+
+    nodes_original = sgraph.vertices
+    el = sgraph.edges;
+
+    node_attr = nodes_original[0].keys()
+
+    for node in nodes_original:
+        new_node = {}
+        data = {}
+        data['id'] = node['__id']
+        data['name'] = node['__id']
+        for key in node_attr:
+            data[key] = node[key]
+        new_node['data'] = data
+        nodes.append(new_node)
+
+
+    for edge in el:
+        new_edge = {}
+        data = {}
+        data['source'] = str(edge['__src_id'])
+        data['target'] = str(edge['__dst_id'])
+        new_edge['data'] = data
+        edges.append(new_edge)
+
+    elements['nodes'] = nodes
+    elements['edges'] = edges
+    new_graph['elements'] = elements
+
+    return new_graph
+
+
+def embedShare(url, width=DEF_WIDTH, height=DEF_HEIGHT):
+    from IPython.core.display import display
+    from IPython.lib.display import IFrame
+    return display(IFrame(url, width, height))
\ No newline at end of file
diff --git a/examples/python/basic/cytoscape/viewer.pyc b/examples/python/basic/cytoscape/viewer.pyc
new file mode 100644
index 00000000..95a6ea53
Binary files /dev/null and b/examples/python/basic/cytoscape/viewer.pyc differ
diff --git a/examples/python/basic/sample_data/yeast_network.json b/examples/python/basic/sample_data/yeast_network.json
new file mode 100644
index 00000000..b4e30c8b
--- /dev/null
+++ b/examples/python/basic/sample_data/yeast_network.json
@@ -0,0 +1,7140 @@
+{
+  "format_version" : "1.0",
+  "generated_by" : "cytoscape-3.1.1",
+  "target_cytoscapejs_version" : "~2.1",
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+    "selected" : true,
+    "__Annotations" : [ ],
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