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@jump-cellpainting

JUMP-Cell Painting Consortium

Joint Undertaking in Morphological Profiling

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  1. datasets datasets Public

    Images and other data from the JUMP Cell Painting Consortium

    Jupyter Notebook 154 16

  2. 2024_Chandrasekaran_NatureMethods 2024_Chandrasekaran_NatureMethods Public

    Jupyter Notebook 52 10

  3. JUMP-Target JUMP-Target Public

    Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays

    18 5

  4. profiling-recipe profiling-recipe Public

    Forked from cytomining/profiling-recipe

    Image-based Profiling Recipe

    Python 5 4

  5. JUMP-MOA JUMP-MOA Public

    A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound

    5 3

  6. embedder embedder Public

    Computing per-cell embeddings for all cpg0016-jump

    Python 2 1

Repositories

Showing 10 of 15 repositories
  • jump-cellpainting/2024_Chandrasekaran_Morphmap’s past year of commit activity
    HTML 1 BSD-3-Clause 3 0 1 Updated Aug 16, 2024
  • datasets Public

    Images and other data from the JUMP Cell Painting Consortium

    jump-cellpainting/datasets’s past year of commit activity
    Jupyter Notebook 154 BSD-3-Clause 16 31 (1 issue needs help) 3 Updated Aug 2, 2024
  • embedder Public

    Computing per-cell embeddings for all cpg0016-jump

    jump-cellpainting/embedder’s past year of commit activity
    Python 2 Apache-2.0 1 2 0 Updated May 31, 2024
  • JUMP-MOA Public

    A list of compounds with diverse MOAs that fit on a single 384-well plate, with 4 replicates per compound

    jump-cellpainting/JUMP-MOA’s past year of commit activity
    5 MIT 3 0 0 Updated Apr 7, 2024
  • JUMP-Target Public

    Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays

    jump-cellpainting/JUMP-Target’s past year of commit activity
    18 MIT 5 6 0 Updated Apr 7, 2024
  • jump-cellpainting/compound-annotator’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 4 4 0 Updated Apr 6, 2024
  • jump-cellpainting/2024_Chandrasekaran_NatureMethods’s past year of commit activity
    Jupyter Notebook 52 BSD-3-Clause 10 3 0 Updated Mar 19, 2024
  • jump-cellpainting/jump-scope-analysis’s past year of commit activity
    Jupyter Notebook 0 0 3 0 Updated Jun 14, 2023
  • cpg0016-jump-orf-data Public

    Data repository for cpg0016-jump[orf]

    jump-cellpainting/cpg0016-jump-orf-data’s past year of commit activity
    1 BSD-3-Clause 1 0 3 Updated Mar 3, 2023
  • cpg0014-jump-adipocyte-data Public

    Data repository for cpg0014-jump-adipocyte

    jump-cellpainting/cpg0014-jump-adipocyte-data’s past year of commit activity
    0 BSD-3-Clause 0 2 0 Updated Mar 2, 2023

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