Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Silent crash when parsing fasta with long lines #57

Open
mboudet opened this issue Jan 5, 2024 · 1 comment
Open

Silent crash when parsing fasta with long lines #57

mboudet opened this issue Jan 5, 2024 · 1 comment

Comments

@mboudet
Copy link
Member

mboudet commented Jan 5, 2024

No description provided.

@mboudet
Copy link
Member Author

mboudet commented Jan 5, 2024

## ERROR: 2024-01-04T11:25:20.012Z MongoInvalidArgumentError: Document is larger than the maximum size 16777216
    at UnorderedBulkOperation.addToOperationsList (/shared/ifbstor1/galaxy/mutable-data/dependencies/_conda/envs/[email protected]/share/genoboo-0.4.9-0/programs/server/npm/node_modules/meteor/npm-mongo/node_modules/mongodb/lib/bulk/unordered.js:29:19)
    at UnorderedBulkOperation.insert (/shared/ifbstor1/galaxy/mutable-data/dependencies/_conda/envs/[email protected]/share/genoboo-0.4.9-0/programs/server/npm/node_modules/meteor/npm-mongo/node_modules/mongodb/lib/bulk/common.js:703:21)
    at LineProcessor.process (imports/api/jobqueue/process-addGenome.js:74:16)
    at imports/api/jobqueue/process-addGenome.js:175:29

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant